RNA–Protein interactions for RNA: ENST00000472789.1

SMARCD3-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 863 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-208ENST00000472789 SH3RF3Q8TEJ3 882 aaPredicted RBP12.71□□□□□ -0.37
SMARCD3-208ENST00000472789 RILPL2Q969X0 211 aa12.71□□□□□ -0.37
SMARCD3-208ENST00000472789 EVI5LQ96CN4 794 aa12.71□□□□□ -0.37
SMARCD3-208ENST00000472789 BACH2Q9BYV9 841 aa12.71□□□□□ -0.37
SMARCD3-208ENST00000472789 ECM29Q5VYK3 1845 aa12.71□□□□□ -0.38
SMARCD3-208ENST00000472789 MAST2Q6P0Q8 1798 aa12.71□□□□□ -0.38
SMARCD3-208ENST00000472789 THSD7BQ9C0I4 1608 aa12.7□□□□□ -0.38
SMARCD3-208ENST00000472789 SDSP20132 328 aa12.7□□□□□ -0.38
SMARCD3-208ENST00000472789 RHBDL3P58872 404 aa12.7□□□□□ -0.38
SMARCD3-208ENST00000472789 SLFNL1Q499Z3 407 aa12.7□□□□□ -0.38
SMARCD3-208ENST00000472789 FKBP1CQ5VVH2 108 aa12.7□□□□□ -0.38
SMARCD3-208ENST00000472789 FAM83AQ86UY5 434 aa12.7□□□□□ -0.38
SMARCD3-208ENST00000472789 FAM198AQ9UFP1 575 aa12.7□□□□□ -0.38
SMARCD3-208ENST00000472789 PPP1R12BO60237 982 aaPredicted RBP12.69□□□□□ -0.38
SMARCD3-208ENST00000472789 ENTPD3O75355 529 aa12.69□□□□□ -0.38
SMARCD3-208ENST00000472789 WDHD1O75717 1129 aaPredicted RBP12.69□□□□□ -0.38
SMARCD3-208ENST00000472789 CHGBP05060 677 aa12.69□□□□□ -0.38
SMARCD3-208ENST00000472789 GSPT1P15170 499 aaKnown RBP12.69□□□□□ -0.38
SMARCD3-208ENST00000472789 ADD2P35612 726 aa12.69□□□□□ -0.38
SMARCD3-208ENST00000472789 USP5P45974 858 aa12.69□□□□□ -0.38
SMARCD3-208ENST00000472789 HUNKP57058 714 aa12.69□□□□□ -0.38
SMARCD3-208ENST00000472789 PPP4CP60510 307 aa12.69□□□□□ -0.38
SMARCD3-208ENST00000472789 TMED8Q6PL24 325 aaPredicted RBP12.69□□□□□ -0.38
SMARCD3-208ENST00000472789 MOB2Q70IA6 237 aa12.69□□□□□ -0.38
SMARCD3-208ENST00000472789 ARMC9Q7Z3E5 817 aa12.69□□□□□ -0.38
SMARCD3-208ENST00000472789 MAPKAPK5Q8IW41 473 aa12.69□□□□□ -0.38
SMARCD3-208ENST00000472789 CDAN1Q8IWY9 1227 aa12.69□□□□□ -0.38
SMARCD3-208ENST00000472789 TGFBRAP1Q8WUH2 860 aa12.69□□□□□ -0.38
SMARCD3-208ENST00000472789 FAM151AQ8WW52 585 aa12.69□□□□□ -0.38
SMARCD3-208ENST00000472789 IDI2Q9BXS1 227 aa12.69□□□□□ -0.38
SMARCD3-208ENST00000472789 DDX4Q9NQI0 724 aaKnown RBP12.69□□□□□ -0.38
SMARCD3-208ENST00000472789 ANGEL1Q9UNK9 670 aaKnown RBP12.69□□□□□ -0.38
SMARCD3-208ENST00000472789 FZD1Q9UP38 647 aa12.69□□□□□ -0.38
SMARCD3-208ENST00000472789 TRPM7Q96QT4 1865 aa12.69□□□□□ -0.38
SMARCD3-208ENST00000472789 UBE2Q2LH0YL09 131 aa12.68□□□□□ -0.38
SMARCD3-208ENST00000472789 RNF113AO15541 343 aaKnown RBP12.68□□□□□ -0.38
SMARCD3-208ENST00000472789 MBD4O95243 580 aa12.68□□□□□ -0.38
SMARCD3-208ENST00000472789 UBE3CQ15386 1083 aa12.68□□□□□ -0.38
SMARCD3-208ENST00000472789 C8orf34Q49A92 452 aa12.68□□□□□ -0.38
SMARCD3-208ENST00000472789 CERS3Q8IU89 383 aa12.68□□□□□ -0.38
SMARCD3-208ENST00000472789 ZFPM1Q8IX07 1006 aa12.68□□□□□ -0.38
SMARCD3-208ENST00000472789 RUFY2Q8WXA3 655 aa12.68□□□□□ -0.38
SMARCD3-208ENST00000472789 HOOK2Q96ED9 719 aa12.68□□□□□ -0.38
SMARCD3-208ENST00000472789 CAPNS2Q96L46 248 aa12.68□□□□□ -0.38
SMARCD3-208ENST00000472789 CRNKL1Q9BZJ0 848 aaKnown RBP12.68□□□□□ -0.38
SMARCD3-208ENST00000472789 ARMT1Q9H993 441 aa12.68□□□□□ -0.38
SMARCD3-208ENST00000472789 TLL2Q9Y6L7 1015 aa12.68□□□□□ -0.38
SMARCD3-208ENST00000472789 AK9Q5TCS8 1911 aa12.68□□□□□ -0.38
SMARCD3-208ENST00000472789 DOCK2Q92608 1830 aa12.67□□□□□ -0.38
SMARCD3-208ENST00000472789 TCRBV5S4A2TA0A5A2 114 aa12.67□□□□□ -0.38
SMARCD3-208ENST00000472789 ZFYP08048 801 aaPredicted RBP12.67□□□□□ -0.38
SMARCD3-208ENST00000472789 IREB2P48200 963 aaKnown RBP12.67□□□□□ -0.38
SMARCD3-208ENST00000472789 FKBP1BP68106 108 aa12.67□□□□□ -0.38
SMARCD3-208ENST00000472789 SLC4A8Q2Y0W8 1093 aa12.67□□□□□ -0.38
SMARCD3-208ENST00000472789 CYP4F22Q6NT55 531 aa12.67□□□□□ -0.38
SMARCD3-208ENST00000472789 MIGA2Q7L4E1 593 aa12.67□□□□□ -0.38
SMARCD3-208ENST00000472789 SAPCD2Q86UD0 394 aa12.67□□□□□ -0.38
SMARCD3-208ENST00000472789 LCORLQ8N3X6 602 aa12.67□□□□□ -0.38
SMARCD3-208ENST00000472789 TEPSINQ96N21 525 aa12.67□□□□□ -0.38
SMARCD3-208ENST00000472789 CSRNP1Q96S65 589 aa12.67□□□□□ -0.38
SMARCD3-208ENST00000472789 SAP30BPQ9UHR5 308 aaKnown RBP12.67□□□□□ -0.38
SMARCD3-208ENST00000472789 RGS19P49795 217 aa12.66□□□□□ -0.38
SMARCD3-208ENST00000472789 DCAF15Q66K64 600 aa12.66□□□□□ -0.38
SMARCD3-208ENST00000472789 APPBP2Q92624 585 aa12.66□□□□□ -0.38
SMARCD3-208ENST00000472789 RIOK1Q9BRS2 568 aaKnown RBP12.66□□□□□ -0.38
SMARCD3-208ENST00000472789 PUS7LQ9H0K6 701 aaKnown RBP12.66□□□□□ -0.38
SMARCD3-208ENST00000472789 OSBPL5Q9H0X9 879 aaPredicted RBP12.66□□□□□ -0.38
SMARCD3-208ENST00000472789 RPAP1Q9BWH6 1393 aaPredicted RBP12.66□□□□□ -0.38
SMARCD3-208ENST00000472789 FLT1P17948 1338 aa12.65□□□□□ -0.38
SMARCD3-208ENST00000472789 DDTLA6NHG4 134 aaPredicted RBP12.65□□□□□ -0.38
SMARCD3-208ENST00000472789 CCDC85CA6NKD9 419 aa12.65□□□□□ -0.38
SMARCD3-208ENST00000472789 REC8O95072 547 aa12.65□□□□□ -0.38
SMARCD3-208ENST00000472789 ZNF157P51786 506 aaPredicted RBP12.65□□□□□ -0.38
SMARCD3-208ENST00000472789 DDRGK1Q96HY6 314 aa12.65□□□□□ -0.38
SMARCD3-208ENST00000472789 TRIM34Q9BYJ4 488 aa12.65□□□□□ -0.38
SMARCD3-208ENST00000472789 DIAPH3Q9NSV4 1193 aa12.65□□□□□ -0.38
SMARCD3-208ENST00000472789 TSKSQ9UJT2 592 aa12.65□□□□□ -0.38
SMARCD3-208ENST00000472789 RFX7Q2KHR2 1363 aa12.65□□□□□ -0.38
SMARCD3-208ENST00000472789 SSC5DA1L4H1 1573 aa12.64□□□□□ -0.39
SMARCD3-208ENST00000472789 PAPPA2Q9BXP8 1791 aa12.64□□□□□ -0.39
SMARCD3-208ENST00000472789 PRKAB2O43741 272 aa12.64□□□□□ -0.39
SMARCD3-208ENST00000472789 AOC2O75106 756 aa12.64□□□□□ -0.39
SMARCD3-208ENST00000472789 USP2O75604 605 aaPredicted RBP12.64□□□□□ -0.39
SMARCD3-208ENST00000472789 NPM3O75607 178 aaKnown RBP12.64□□□□□ -0.39
SMARCD3-208ENST00000472789 HLA-DOAP06340 250 aa12.64□□□□□ -0.39
SMARCD3-208ENST00000472789 ECE1P42892 770 aa12.64□□□□□ -0.39
SMARCD3-208ENST00000472789 MLLT1Q03111 559 aaPredicted RBP12.64□□□□□ -0.39
SMARCD3-208ENST00000472789 RGMBQ6NW40 437 aa12.64□□□□□ -0.39
SMARCD3-208ENST00000472789 SH3BP5LQ7L8J4 393 aa12.64□□□□□ -0.39
SMARCD3-208ENST00000472789 CRACR2BQ8N4Y2 399 aaPredicted RBP12.64□□□□□ -0.39
SMARCD3-208ENST00000472789 SDR42E1Q8WUS8 393 aa12.64□□□□□ -0.39
SMARCD3-208ENST00000472789 OSBP2Q969R2 916 aa12.64□□□□□ -0.39
SMARCD3-208ENST00000472789 ZNF341Q9BYN7 854 aa12.64□□□□□ -0.39
SMARCD3-208ENST00000472789 PALD1Q9ULE6 856 aa12.64□□□□□ -0.39
SMARCD3-208ENST00000472789 SLC4A4Q9Y6R1 1079 aa12.64□□□□□ -0.39
SMARCD3-208ENST00000472789 MYH7P12883 1935 aa12.64□□□□□ -0.39
SMARCD3-208ENST00000472789 M0R2C6 588 aa12.63□□□□□ -0.39
SMARCD3-208ENST00000472789 APPP05067 770 aa12.63□□□□□ -0.39
SMARCD3-208ENST00000472789 POLR3DP05423 398 aaPredicted RBP12.63□□□□□ -0.39
SMARCD3-208ENST00000472789 CHMLP26374 656 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms