RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 RAD51AP2Q09MP3 1159 aa9.39□□□□□ -0.91
CLK1-209ENST00000472679 GPAT2Q6NUI2 795 aa9.39□□□□□ -0.91
CLK1-209ENST00000472679 DYMQ7RTS9 669 aa9.39□□□□□ -0.91
CLK1-209ENST00000472679 GOLM1Q8NBJ4 401 aa9.39□□□□□ -0.91
CLK1-209ENST00000472679 SPOCK3Q9BQ16 436 aa9.39□□□□□ -0.91
CLK1-209ENST00000472679 TPSG1Q9NRR2 321 aa9.39□□□□□ -0.91
CLK1-209ENST00000472679 CRIM1Q9NZV1 1036 aa9.39□□□□□ -0.91
CLK1-209ENST00000472679 ACTL7BQ9Y614 415 aa9.39□□□□□ -0.91
CLK1-209ENST00000472679 LRFN4Q6PJG9 635 aa9.38□□□□□ -0.91
CLK1-209ENST00000472679 DISC1Q9NRI5 854 aa9.38□□□□□ -0.91
CLK1-209ENST00000472679 FAM221AA4D161 298 aa9.37□□□□□ -0.91
CLK1-209ENST00000472679 DOC2BQ14184 412 aa9.37□□□□□ -0.91
CLK1-209ENST00000472679 SNAP47Q5SQN1 464 aa9.37□□□□□ -0.91
CLK1-209ENST00000472679 C12orf40Q86WS4 652 aa9.37□□□□□ -0.91
CLK1-209ENST00000472679 FBXO27Q8NI29 283 aa9.37□□□□□ -0.91
CLK1-209ENST00000472679 ZNF296Q8WUU4 475 aaPredicted RBP9.37□□□□□ -0.91
CLK1-209ENST00000472679 TP53INP1Q96A56 240 aa9.37□□□□□ -0.91
CLK1-209ENST00000472679 PLPPR2Q96GM1 343 aa9.37□□□□□ -0.91
CLK1-209ENST00000472679 FANCD2OSQ96PS1 177 aa9.37□□□□□ -0.91
CLK1-209ENST00000472679 KCNQ5Q9NR82 932 aa9.37□□□□□ -0.91
CLK1-209ENST00000472679 FAM105AQ9NUU6 356 aa9.37□□□□□ -0.91
CLK1-209ENST00000472679 SGO2Q562F6 1265 aa9.36□□□□□ -0.91
CLK1-209ENST00000472679 CDPF1Q6NVV7 123 aa9.36□□□□□ -0.91
CLK1-209ENST00000472679 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.36□□□□□ -0.91
CLK1-209ENST00000472679 CCDC84Q86UT8 332 aaPredicted RBP9.36□□□□□ -0.91
CLK1-209ENST00000472679 UTP4Q969X6 686 aaKnown RBP9.36□□□□□ -0.91
CLK1-209ENST00000472679 GSX1Q9H4S2 264 aaPredicted RBP9.36□□□□□ -0.91
CLK1-209ENST00000472679 MSTNO14793 375 aa9.35□□□□□ -0.91
CLK1-209ENST00000472679 GAS2O43903 313 aaKnown RBP9.35□□□□□ -0.91
CLK1-209ENST00000472679 GREM1O60565 184 aa9.35□□□□□ -0.91
CLK1-209ENST00000472679 CILPO75339 1184 aa9.35□□□□□ -0.91
CLK1-209ENST00000472679 UVSSAQ2YD98 709 aa9.35□□□□□ -0.91
CLK1-209ENST00000472679 WIPI1Q5MNZ9 446 aaPredicted RBP9.35□□□□□ -0.91
CLK1-209ENST00000472679 GATAD2BQ8WXI9 593 aa9.35□□□□□ -0.91
CLK1-209ENST00000472679 MYRFLQ96LU7 910 aa9.35□□□□□ -0.91
CLK1-209ENST00000472679 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.35□□□□□ -0.91
CLK1-209ENST00000472679 HIF3AQ9Y2N7 669 aa9.35□□□□□ -0.91
CLK1-209ENST00000472679 GFRA2O00451 464 aa9.34□□□□□ -0.91
CLK1-209ENST00000472679 BMP3P12645 472 aa9.34□□□□□ -0.91
CLK1-209ENST00000472679 ERCC5P28715 1186 aaPredicted RBP9.34□□□□□ -0.91
CLK1-209ENST00000472679 ASPAP45381 313 aa9.34□□□□□ -0.91
CLK1-209ENST00000472679 CRKP46108 304 aa9.34□□□□□ -0.91
CLK1-209ENST00000472679 ERVK-24P63145 666 aa9.34□□□□□ -0.91
CLK1-209ENST00000472679 HNRNPUQ00839 825 aaKnown RBP eCLIP9.34□□□□□ -0.91
CLK1-209ENST00000472679 RING1Q06587 406 aa9.34□□□□□ -0.91
CLK1-209ENST00000472679 TTLL4Q14679 1199 aa9.34□□□□□ -0.91
CLK1-209ENST00000472679 PPM1JQ5JR12 505 aa9.34□□□□□ -0.91
CLK1-209ENST00000472679 FAM196AQ6ZSG2 479 aa9.34□□□□□ -0.91
CLK1-209ENST00000472679 CYFIP1Q7L576 1253 aa9.34□□□□□ -0.91
CLK1-209ENST00000472679 FAM20CQ8IXL6 584 aa9.34□□□□□ -0.91
CLK1-209ENST00000472679 ZNF654Q8IZM8 581 aa9.34□□□□□ -0.91
CLK1-209ENST00000472679 FBLIM1Q8WUP2 373 aa9.34□□□□□ -0.91
CLK1-209ENST00000472679 ELMO3Q96BJ8 720 aa9.34□□□□□ -0.91
CLK1-209ENST00000472679 EAF1Q96JC9 268 aaPredicted RBP9.34□□□□□ -0.91
CLK1-209ENST00000472679 SPON2Q9BUD6 331 aa9.34□□□□□ -0.91
CLK1-209ENST00000472679 SUPT16HQ9Y5B9 1047 aaKnown RBP9.34□□□□□ -0.91
CLK1-209ENST00000472679 TLR3O15455 904 aaKnown RBP9.33□□□□□ -0.92
CLK1-209ENST00000472679 NEFMP07197 916 aa9.33□□□□□ -0.92
CLK1-209ENST00000472679 USP11P51784 963 aa9.33□□□□□ -0.92
CLK1-209ENST00000472679 RPL6Q02878 288 aaKnown RBP9.33□□□□□ -0.92
CLK1-209ENST00000472679 KIAA0825Q8IV33 1275 aa9.33□□□□□ -0.92
CLK1-209ENST00000472679 ATXN3LQ9H3M9 355 aa9.33□□□□□ -0.92
CLK1-209ENST00000472679 ACBD3Q9H3P7 528 aa9.33□□□□□ -0.92
CLK1-209ENST00000472679 UBP1Q9NZI7 540 aa9.33□□□□□ -0.92
CLK1-209ENST00000472679 HCLS1P14317 486 aaPredicted RBP9.32□□□□□ -0.92
CLK1-209ENST00000472679 RAB6AP20340 208 aa9.32□□□□□ -0.92
CLK1-209ENST00000472679 NTF4P34130 210 aa9.32□□□□□ -0.92
CLK1-209ENST00000472679 HDXQ7Z353 690 aa9.32□□□□□ -0.92
CLK1-209ENST00000472679 TGIF2Q9GZN2 237 aa9.32□□□□□ -0.92
CLK1-209ENST00000472679 ACSS3Q9H6R3 686 aa9.32□□□□□ -0.92
CLK1-209ENST00000472679 SNCAIPQ9Y6H5 919 aa9.32□□□□□ -0.92
CLK1-209ENST00000472679 PRAMEF27A3QJZ7 478 aa9.31□□□□□ -0.92
CLK1-209ENST00000472679 DHX15O43143 795 aaKnown RBP9.31□□□□□ -0.92
CLK1-209ENST00000472679 MAP4P27816 1152 aaKnown RBP9.31□□□□□ -0.92
CLK1-209ENST00000472679 RNF214Q8ND24 703 aa9.31□□□□□ -0.92
CLK1-209ENST00000472679 NFICP08651 508 aa9.3□□□□□ -0.92
CLK1-209ENST00000472679 TNNI2P48788 182 aa9.3□□□□□ -0.92
CLK1-209ENST00000472679 PAK2Q13177 524 aa9.3□□□□□ -0.92
CLK1-209ENST00000472679 ZBTB37Q5TC79 503 aa9.3□□□□□ -0.92
CLK1-209ENST00000472679 UBE3DQ7Z6J8 389 aa9.3□□□□□ -0.92
CLK1-209ENST00000472679 KCNF1Q9H3M0 494 aa9.3□□□□□ -0.92
CLK1-209ENST00000472679 SEMA6CQ9H3T2 930 aa9.3□□□□□ -0.92
CLK1-209ENST00000472679 PIDD1Q9HB75 910 aa9.3□□□□□ -0.92
CLK1-209ENST00000472679 POLR3KQ9Y2Y1 108 aaPredicted RBP9.3□□□□□ -0.92
CLK1-209ENST00000472679 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.29□□□□□ -0.92
CLK1-209ENST00000472679 RNGTTO60942 597 aaKnown RBP9.29□□□□□ -0.92
CLK1-209ENST00000472679 BPNT1O95861 308 aa9.29□□□□□ -0.92
CLK1-209ENST00000472679 RXRBP28702 533 aa9.29□□□□□ -0.92
CLK1-209ENST00000472679 MPP2Q14168 576 aa9.29□□□□□ -0.92
CLK1-209ENST00000472679 RSPO4Q2I0M5 234 aaPredicted RBP9.29□□□□□ -0.92
CLK1-209ENST00000472679 NKAPLQ5M9Q1 402 aa9.29□□□□□ -0.92
CLK1-209ENST00000472679 PRR23CQ6ZRP0 262 aa9.29□□□□□ -0.92
CLK1-209ENST00000472679 BEND4Q6ZU67 534 aa9.29□□□□□ -0.92
CLK1-209ENST00000472679 EZH1Q92800 747 aaPredicted RBP9.29□□□□□ -0.92
CLK1-209ENST00000472679 ISL2Q96A47 359 aa9.29□□□□□ -0.92
CLK1-209ENST00000472679 NT5C1AQ9BXI3 368 aa9.29□□□□□ -0.92
CLK1-209ENST00000472679 LGR6Q9HBX8 967 aa9.29□□□□□ -0.92
CLK1-209ENST00000472679 PICK1Q9NRD5 415 aa9.29□□□□□ -0.92
CLK1-209ENST00000472679 CORINQ9Y5Q5 1042 aa9.29□□□□□ -0.92
CLK1-209ENST00000472679 HMX2A2RU54 273 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms