RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 ADGRA1Q86SQ6 560 aa17.17■□□□□ 0.34
BRCA1-211ENST00000472490 ANKRD13AQ8IZ07 590 aa17.17■□□□□ 0.34
BRCA1-211ENST00000472490 JMYQ8N9B5 988 aa17.17■□□□□ 0.34
BRCA1-211ENST00000472490 KBTBD3Q8NAB2 608 aa17.17■□□□□ 0.34
BRCA1-211ENST00000472490 OTUD7AQ8TE49 926 aaPredicted RBP17.17■□□□□ 0.34
BRCA1-211ENST00000472490 SH3RF3Q8TEJ3 882 aaPredicted RBP17.17■□□□□ 0.34
BRCA1-211ENST00000472490 CSRNP1Q96S65 589 aa17.17■□□□□ 0.34
BRCA1-211ENST00000472490 DHX36Q9H2U1 1008 aaKnown RBP17.17■□□□□ 0.34
BRCA1-211ENST00000472490 AKAP11Q9UKA4 1901 aa17.17■□□□□ 0.34
BRCA1-211ENST00000472490 SALL3Q9BXA9 1300 aa17.17■□□□□ 0.34
BRCA1-211ENST00000472490 ZNF532Q9HCE3 1301 aa17.17■□□□□ 0.34
BRCA1-211ENST00000472490 RFX7Q2KHR2 1363 aa17.16■□□□□ 0.34
BRCA1-211ENST00000472490 MAGEB6P1A0A0J9YX57 407 aa17.16■□□□□ 0.34
BRCA1-211ENST00000472490 ZFYP08048 801 aaPredicted RBP17.16■□□□□ 0.34
BRCA1-211ENST00000472490 ADD2P35612 726 aa17.16■□□□□ 0.34
BRCA1-211ENST00000472490 UBE3CQ15386 1083 aa17.16■□□□□ 0.34
BRCA1-211ENST00000472490 LDLRAD1Q5T700 205 aa17.16■□□□□ 0.34
BRCA1-211ENST00000472490 MOB2Q70IA6 237 aa17.16■□□□□ 0.34
BRCA1-211ENST00000472490 MIGA1Q8NAN2 632 aa17.16■□□□□ 0.34
BRCA1-211ENST00000472490 MAST2Q6P0Q8 1798 aa17.15■□□□□ 0.34
BRCA1-211ENST00000472490 USP2O75604 605 aaPredicted RBP17.15■□□□□ 0.34
BRCA1-211ENST00000472490 USP5P45974 858 aa17.15■□□□□ 0.34
BRCA1-211ENST00000472490 TGFBRAP1Q8WUH2 860 aa17.15■□□□□ 0.34
BRCA1-211ENST00000472490 SLC10A4Q96EP9 437 aa17.15■□□□□ 0.34
BRCA1-211ENST00000472490 ZNF341Q9BYN7 854 aa17.15■□□□□ 0.34
BRCA1-211ENST00000472490 OSBPL5Q9H0X9 879 aaPredicted RBP17.15■□□□□ 0.34
BRCA1-211ENST00000472490 DDX4Q9NQI0 724 aaKnown RBP17.15■□□□□ 0.34
BRCA1-211ENST00000472490 CSADQ9Y600 493 aa17.15■□□□□ 0.34
BRCA1-211ENST00000472490 SSC5DA1L4H1 1573 aa17.15■□□□□ 0.34
BRCA1-211ENST00000472490 ATRNL1Q5VV63 1379 aa17.15■□□□□ 0.34
BRCA1-211ENST00000472490 TCRBV5S4A2TA0A5A2 114 aa17.14■□□□□ 0.33
BRCA1-211ENST00000472490 MAP2K1Q02750 393 aaPredicted RBP17.14■□□□□ 0.33
BRCA1-211ENST00000472490 CDAN1Q8IWY9 1227 aa17.14■□□□□ 0.33
BRCA1-211ENST00000472490 ZFPM1Q8IX07 1006 aa17.14■□□□□ 0.33
BRCA1-211ENST00000472490 REM2Q8IYK8 340 aaPredicted RBP17.14■□□□□ 0.33
BRCA1-211ENST00000472490 CRNKL1Q9BZJ0 848 aaKnown RBP17.14■□□□□ 0.33
BRCA1-211ENST00000472490 MYH2Q9UKX2 1941 aa17.13■□□□□ 0.33
BRCA1-211ENST00000472490 COL2A1P02458 1487 aaPredicted RBP17.13■□□□□ 0.33
BRCA1-211ENST00000472490 SLC10A3P09131 477 aa17.13■□□□□ 0.33
BRCA1-211ENST00000472490 DYNLL1P63167 89 aaKnown RBP17.13■□□□□ 0.33
BRCA1-211ENST00000472490 MAP3K9P80192 1104 aa17.13■□□□□ 0.33
BRCA1-211ENST00000472490 MIGA2Q7L4E1 593 aa17.13■□□□□ 0.33
BRCA1-211ENST00000472490 TICAM2Q86XR7 235 aa17.13■□□□□ 0.33
BRCA1-211ENST00000472490 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.13■□□□□ 0.33
BRCA1-211ENST00000472490 EVI5LQ96CN4 794 aa17.13■□□□□ 0.33
BRCA1-211ENST00000472490 WRNIP1Q96S55 665 aa17.13■□□□□ 0.33
BRCA1-211ENST00000472490 RIOK1Q9BRS2 568 aaKnown RBP17.13■□□□□ 0.33
BRCA1-211ENST00000472490 FSD1Q9BTV5 496 aa17.13■□□□□ 0.33
BRCA1-211ENST00000472490 OSBPL3Q9H4L5 887 aa17.13■□□□□ 0.33
BRCA1-211ENST00000472490 PI4KBQ9UBF8 816 aa17.13■□□□□ 0.33
BRCA1-211ENST00000472490 FLT1P17948 1338 aa17.13■□□□□ 0.33
BRCA1-211ENST00000472490 POLR2AP24928 1970 aaKnown RBP17.13■□□□□ 0.33
BRCA1-211ENST00000472490 DDTLA6NHG4 134 aaPredicted RBP17.12■□□□□ 0.33
BRCA1-211ENST00000472490 RNF113AO15541 343 aaKnown RBP17.12■□□□□ 0.33
BRCA1-211ENST00000472490 RASAL3Q86YV0 1011 aa17.12■□□□□ 0.33
BRCA1-211ENST00000472490 MAPKAPK5Q8IW41 473 aa17.12■□□□□ 0.33
BRCA1-211ENST00000472490 AIDAQ96BJ3 306 aa17.12■□□□□ 0.33
BRCA1-211ENST00000472490 DDRGK1Q96HY6 314 aa17.12■□□□□ 0.33
BRCA1-211ENST00000472490 BEGAINQ9BUH8 593 aa17.12■□□□□ 0.33
BRCA1-211ENST00000472490 FZD1Q9UP38 647 aa17.12■□□□□ 0.33
BRCA1-211ENST00000472490 FAM155AB1AL88 458 aaPredicted RBP17.11■□□□□ 0.33
BRCA1-211ENST00000472490 TBC1D12O60347 775 aa17.11■□□□□ 0.33
BRCA1-211ENST00000472490 HLA-DOAP06340 250 aa17.11■□□□□ 0.33
BRCA1-211ENST00000472490 SH3BP5LQ7L8J4 393 aa17.11■□□□□ 0.33
BRCA1-211ENST00000472490 PLEKHM2Q8IWE5 1019 aa17.11■□□□□ 0.33
BRCA1-211ENST00000472490 APPBP2Q92624 585 aa17.11■□□□□ 0.33
BRCA1-211ENST00000472490 HERC5Q9UII4 1024 aaKnown RBP17.11■□□□□ 0.33
BRCA1-211ENST00000472490 MBD4O95243 580 aa17.1■□□□□ 0.33
BRCA1-211ENST00000472490 ZBTB48P10074 688 aaPredicted RBP17.1■□□□□ 0.33
BRCA1-211ENST00000472490 MAP3K10Q02779 954 aa17.1■□□□□ 0.33
BRCA1-211ENST00000472490 CENPQQ7L2Z9 268 aaPredicted RBP17.1■□□□□ 0.33
BRCA1-211ENST00000472490 TTC6Q86TZ1 520 aa17.1■□□□□ 0.33
BRCA1-211ENST00000472490 FOXP4Q8IVH2 680 aaPredicted RBP17.1■□□□□ 0.33
BRCA1-211ENST00000472490 TRIM34Q9BYJ4 488 aa17.1■□□□□ 0.33
BRCA1-211ENST00000472490 ATP8A2Q9NTI2 1148 aa17.1■□□□□ 0.33
BRCA1-211ENST00000472490 DOCK2Q92608 1830 aa17.1■□□□□ 0.33
BRCA1-211ENST00000472490 TRIM6-TRIM34B2RNG4 842 aa17.09■□□□□ 0.33
BRCA1-211ENST00000472490 AOC2O75106 756 aa17.09■□□□□ 0.33
BRCA1-211ENST00000472490 VGLL4Q14135 290 aa17.09■□□□□ 0.33
BRCA1-211ENST00000472490 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.09■□□□□ 0.33
BRCA1-211ENST00000472490 AMOTL1Q8IY63 956 aa17.09■□□□□ 0.33
BRCA1-211ENST00000472490 LCORLQ8N3X6 602 aa17.09■□□□□ 0.33
BRCA1-211ENST00000472490 CRACR2BQ8N4Y2 399 aaPredicted RBP17.09■□□□□ 0.33
BRCA1-211ENST00000472490 CLMNQ96JQ2 1002 aa17.09■□□□□ 0.33
BRCA1-211ENST00000472490 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.09■□□□□ 0.33
BRCA1-211ENST00000472490 ZNF112Q9UJU3 913 aa17.09■□□□□ 0.33
BRCA1-211ENST00000472490 GNAT2P19087 354 aa17.08■□□□□ 0.32
BRCA1-211ENST00000472490 INHBEP58166 350 aa17.08■□□□□ 0.32
BRCA1-211ENST00000472490 KIF23Q02241 960 aaPredicted RBP17.08■□□□□ 0.32
BRCA1-211ENST00000472490 SREBF2Q12772 1141 aa17.08■□□□□ 0.32
BRCA1-211ENST00000472490 ERICH6BQ5W0A0 696 aa17.08■□□□□ 0.32
BRCA1-211ENST00000472490 SPRYD7Q5W111 196 aa17.08■□□□□ 0.32
BRCA1-211ENST00000472490 CCDC136Q96JN2 1154 aa17.08■□□□□ 0.32
BRCA1-211ENST00000472490 PUS7LQ9H0K6 701 aaKnown RBP17.08■□□□□ 0.32
BRCA1-211ENST00000472490 ARMT1Q9H993 441 aa17.08■□□□□ 0.32
BRCA1-211ENST00000472490 ELP3Q9H9T3 547 aa17.08■□□□□ 0.32
BRCA1-211ENST00000472490 PALD1Q9ULE6 856 aa17.08■□□□□ 0.32
BRCA1-211ENST00000472490 CA12O43570 354 aa17.07■□□□□ 0.32
BRCA1-211ENST00000472490 CTNND1O60716 968 aaKnown RBP17.07■□□□□ 0.32
BRCA1-211ENST00000472490 POLR3DP05423 398 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms