RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 HLA-DOAP06340 250 aa12.55□□□□□ -0.4
UBE2F-220ENST00000472479 SLC3A2P08195 630 aaKnown RBP12.55□□□□□ -0.4
UBE2F-220ENST00000472479 RHBDL3P58872 404 aa12.55□□□□□ -0.4
UBE2F-220ENST00000472479 PTH1RQ03431 593 aa12.55□□□□□ -0.4
UBE2F-220ENST00000472479 SPDYE2Q495Y8 402 aa12.55□□□□□ -0.4
UBE2F-220ENST00000472479 SULF1Q8IWU6 871 aa12.55□□□□□ -0.4
UBE2F-220ENST00000472479 STK11IPQ8N1F8 1099 aa12.55□□□□□ -0.4
UBE2F-220ENST00000472479 DSCC1Q9BVC3 393 aa12.55□□□□□ -0.4
UBE2F-220ENST00000472479 GGA3Q9NZ52 723 aa12.55□□□□□ -0.4
UBE2F-220ENST00000472479 RPAP1Q9BWH6 1393 aaPredicted RBP12.54□□□□□ -0.4
UBE2F-220ENST00000472479 GSG1L2A8MUP6 293 aa12.54□□□□□ -0.4
UBE2F-220ENST00000472479 ZNF213O14771 459 aa12.54□□□□□ -0.4
UBE2F-220ENST00000472479 IMMTQ16891 758 aaKnown RBP12.54□□□□□ -0.4
UBE2F-220ENST00000472479 RNF20Q5VTR2 975 aa12.54□□□□□ -0.4
UBE2F-220ENST00000472479 TTC6Q86TZ1 520 aa12.54□□□□□ -0.4
UBE2F-220ENST00000472479 CRACR2BQ8N4Y2 399 aaPredicted RBP12.54□□□□□ -0.4
UBE2F-220ENST00000472479 IL25Q9H293 177 aa12.54□□□□□ -0.4
UBE2F-220ENST00000472479 NMRK2Q9NPI5 230 aa12.54□□□□□ -0.4
UBE2F-220ENST00000472479 TOMM22Q9NS69 142 aa12.54□□□□□ -0.4
UBE2F-220ENST00000472479 SCAF8Q9UPN6 1271 aaKnown RBP12.54□□□□□ -0.4
UBE2F-220ENST00000472479 FLT1P17948 1338 aa12.54□□□□□ -0.4
UBE2F-220ENST00000472479 USP17L12C9JPN9 530 aa12.53□□□□□ -0.4
UBE2F-220ENST00000472479 USP17L21D6R901 530 aa12.53□□□□□ -0.4
UBE2F-220ENST00000472479 ENTPD3O75355 529 aa12.53□□□□□ -0.4
UBE2F-220ENST00000472479 FGAP02671 866 aa12.53□□□□□ -0.4
UBE2F-220ENST00000472479 ZKSCAN1P17029 563 aaPredicted RBP12.53□□□□□ -0.4
UBE2F-220ENST00000472479 HIRAP54198 1017 aaPredicted RBP12.53□□□□□ -0.4
UBE2F-220ENST00000472479 NFIAQ12857 509 aa12.53□□□□□ -0.4
UBE2F-220ENST00000472479 GIMAP6Q6P9H5 292 aa12.53□□□□□ -0.4
UBE2F-220ENST00000472479 IDI2Q9BXS1 227 aa12.53□□□□□ -0.4
UBE2F-220ENST00000472479 BACH2Q9BYV9 841 aa12.53□□□□□ -0.4
UBE2F-220ENST00000472479 DCP1AQ9NPI6 582 aaPredicted RBP12.53□□□□□ -0.4
UBE2F-220ENST00000472479 PALD1Q9ULE6 856 aa12.53□□□□□ -0.4
UBE2F-220ENST00000472479 RBM8AQ9Y5S9 174 aaKnown RBP12.53□□□□□ -0.4
UBE2F-220ENST00000472479 MYH2Q9UKX2 1941 aa12.53□□□□□ -0.4
UBE2F-220ENST00000472479 MYO5AQ9Y4I1 1855 aaKnown RBP12.53□□□□□ -0.4
UBE2F-220ENST00000472479 ASTN2O75129 1339 aaPredicted RBP12.53□□□□□ -0.4
UBE2F-220ENST00000472479 WDHD1O75717 1129 aaPredicted RBP12.53□□□□□ -0.4
UBE2F-220ENST00000472479 SEC24BO95487 1268 aa12.53□□□□□ -0.4
UBE2F-220ENST00000472479 HAND2P61296 217 aa12.53□□□□□ -0.4
UBE2F-220ENST00000472479 RASA3Q14644 834 aa12.53□□□□□ -0.4
UBE2F-220ENST00000472479 ZC3H15Q8WU90 426 aaKnown RBP12.53□□□□□ -0.4
UBE2F-220ENST00000472479 FAM151AQ8WW52 585 aa12.53□□□□□ -0.4
UBE2F-220ENST00000472479 ZBED3Q96IU2 234 aaPredicted RBP12.53□□□□□ -0.4
UBE2F-220ENST00000472479 LSG1Q9H089 658 aaKnown RBP12.53□□□□□ -0.4
UBE2F-220ENST00000472479 OSBPL5Q9H0X9 879 aaPredicted RBP12.53□□□□□ -0.4
UBE2F-220ENST00000472479 DHX36Q9H2U1 1008 aaKnown RBP12.53□□□□□ -0.4
UBE2F-220ENST00000472479 ARPP21Q9UBL0 812 aaPredicted RBP12.53□□□□□ -0.4
UBE2F-220ENST00000472479 PSME4Q14997 1843 aa12.52□□□□□ -0.4
UBE2F-220ENST00000472479 DOCK2Q92608 1830 aa12.52□□□□□ -0.4
UBE2F-220ENST00000472479 MAST2Q6P0Q8 1798 aa12.52□□□□□ -0.4
UBE2F-220ENST00000472479 POTECB2RU33 542 aa12.52□□□□□ -0.41
UBE2F-220ENST00000472479 ALX1Q15699 326 aa12.52□□□□□ -0.41
UBE2F-220ENST00000472479 FKBP1CQ5VVH2 108 aa12.52□□□□□ -0.41
UBE2F-220ENST00000472479 KRT26Q7Z3Y9 468 aa12.52□□□□□ -0.41
UBE2F-220ENST00000472479 USP48Q86UV5 1035 aa12.52□□□□□ -0.41
UBE2F-220ENST00000472479 FAM83AQ86UY5 434 aa12.52□□□□□ -0.41
UBE2F-220ENST00000472479 MAP4K1Q92918 833 aa12.52□□□□□ -0.41
UBE2F-220ENST00000472479 HOOK2Q96ED9 719 aa12.52□□□□□ -0.41
UBE2F-220ENST00000472479 CSRNP1Q96S65 589 aa12.52□□□□□ -0.41
UBE2F-220ENST00000472479 DEFB129Q9H1M3 183 aa12.52□□□□□ -0.41
UBE2F-220ENST00000472479 MKNK2Q9HBH9 465 aa12.52□□□□□ -0.41
UBE2F-220ENST00000472479 DDX4Q9NQI0 724 aaKnown RBP12.52□□□□□ -0.41
UBE2F-220ENST00000472479 FAM198AQ9UFP1 575 aa12.52□□□□□ -0.41
UBE2F-220ENST00000472479 MYH7P12883 1935 aa12.51□□□□□ -0.41
UBE2F-220ENST00000472479 CYP2D7A0A087X1C5 515 aa12.51□□□□□ -0.41
UBE2F-220ENST00000472479 NF2P35240 595 aa12.51□□□□□ -0.41
UBE2F-220ENST00000472479 PPARAQ07869 468 aa12.51□□□□□ -0.41
UBE2F-220ENST00000472479 TRDNQ13061 729 aa12.51□□□□□ -0.41
UBE2F-220ENST00000472479 CTR9Q6PD62 1173 aa12.51□□□□□ -0.41
UBE2F-220ENST00000472479 CDC37L1Q7L3B6 337 aa12.51□□□□□ -0.41
UBE2F-220ENST00000472479 LDHDQ86WU2 507 aa12.51□□□□□ -0.41
UBE2F-220ENST00000472479 ZFPM1Q8IX07 1006 aa12.51□□□□□ -0.41
UBE2F-220ENST00000472479 USP26Q9BXU7 913 aa12.51□□□□□ -0.41
UBE2F-220ENST00000472479 TMEM39BQ9GZU3 492 aa12.51□□□□□ -0.41
UBE2F-220ENST00000472479 ZNF287Q9HBT7 754 aa12.51□□□□□ -0.41
UBE2F-220ENST00000472479 PI4KBQ9UBF8 816 aa12.51□□□□□ -0.41
UBE2F-220ENST00000472479 CYP2D6P10635 497 aa12.5□□□□□ -0.41
UBE2F-220ENST00000472479 CTDSPL2Q05D32 466 aa12.5□□□□□ -0.41
UBE2F-220ENST00000472479 PDE4BQ07343 736 aa12.5□□□□□ -0.41
UBE2F-220ENST00000472479 TTLL12Q14166 644 aaPredicted RBP12.5□□□□□ -0.41
UBE2F-220ENST00000472479 SUPT20HL1Q3ZLR7 823 aa12.5□□□□□ -0.41
UBE2F-220ENST00000472479 RRP12Q5JTH9 1297 aaKnown RBP12.5□□□□□ -0.41
UBE2F-220ENST00000472479 PRAMEF18Q5VWM3 479 aa12.5□□□□□ -0.41
UBE2F-220ENST00000472479 CREB3L3Q68CJ9 461 aa12.5□□□□□ -0.41
UBE2F-220ENST00000472479 ZNF444Q8N0Y2 327 aaPredicted RBP12.5□□□□□ -0.41
UBE2F-220ENST00000472479 C22orf23Q9BZE7 217 aa12.5□□□□□ -0.41
UBE2F-220ENST00000472479 EPB41L4AQ9HCS5 686 aaPredicted RBP12.5□□□□□ -0.41
UBE2F-220ENST00000472479 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.5□□□□□ -0.41
UBE2F-220ENST00000472479 PITPNM2Q9BZ72 1349 aa12.49□□□□□ -0.41
UBE2F-220ENST00000472479 ADM5C9JUS6 153 aa12.49□□□□□ -0.41
UBE2F-220ENST00000472479 EPB41L2O43491 1005 aaKnown RBP12.49□□□□□ -0.41
UBE2F-220ENST00000472479 SBK1Q52WX2 424 aa12.49□□□□□ -0.41
UBE2F-220ENST00000472479 C12orf60Q5U649 245 aa12.49□□□□□ -0.41
UBE2F-220ENST00000472479 MAP1SQ66K74 1059 aaPredicted RBP12.49□□□□□ -0.41
UBE2F-220ENST00000472479 MFSD6Q6ZSS7 791 aa12.49□□□□□ -0.41
UBE2F-220ENST00000472479 RALYLQ86SE5 291 aaKnown RBP12.49□□□□□ -0.41
UBE2F-220ENST00000472479 FOXP4Q8IVH2 680 aaPredicted RBP12.49□□□□□ -0.41
UBE2F-220ENST00000472479 RNF41Q9H4P4 317 aaPredicted RBP12.49□□□□□ -0.41
UBE2F-220ENST00000472479 ZNF408Q9H9D4 720 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms