RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 ZNF804BA4D1E1 1349 aa15.33■□□□□ 0.04
SCAMP4-207ENST00000472442 ZNF213O14771 459 aa15.33■□□□□ 0.04
SCAMP4-207ENST00000472442 CTDNEP1O95476 244 aa15.33■□□□□ 0.04
SCAMP4-207ENST00000472442 GYG1P46976 350 aa15.33■□□□□ 0.04
SCAMP4-207ENST00000472442 FAM196AQ6ZSG2 479 aa15.33■□□□□ 0.04
SCAMP4-207ENST00000472442 QTRT2Q9H974 415 aaKnown RBP15.33■□□□□ 0.04
SCAMP4-207ENST00000472442 MAP3K12Q12852 859 aa15.32■□□□□ 0.04
SCAMP4-207ENST00000472442 SMARCC2Q8TAQ2 1214 aa15.32■□□□□ 0.04
SCAMP4-207ENST00000472442 NLRP3Q96P20 1036 aa15.32■□□□□ 0.04
SCAMP4-207ENST00000472442 H3BQV1 296 aa15.32■□□□□ 0.04
SCAMP4-207ENST00000472442 ANTXR2P58335 489 aa15.32■□□□□ 0.04
SCAMP4-207ENST00000472442 ERCC6LQ2NKX8 1250 aa15.32■□□□□ 0.04
SCAMP4-207ENST00000472442 IFFO2Q5TF58 517 aa15.32■□□□□ 0.04
SCAMP4-207ENST00000472442 TPTE2Q6XPS3 522 aa15.32■□□□□ 0.04
SCAMP4-207ENST00000472442 DHX40Q8IX18 779 aaKnown RBP15.32■□□□□ 0.04
SCAMP4-207ENST00000472442 PDIA3P30101 505 aaKnown RBP15.31■□□□□ 0.04
SCAMP4-207ENST00000472442 TM4SF1P30408 202 aa15.31■□□□□ 0.04
SCAMP4-207ENST00000472442 UBE4AQ14139 1066 aa15.31■□□□□ 0.04
SCAMP4-207ENST00000472442 TRAPPC3LQ5T215 181 aa15.31■□□□□ 0.04
SCAMP4-207ENST00000472442 LRRN4CLQ8ND94 238 aa15.31■□□□□ 0.04
SCAMP4-207ENST00000472442 FBXW7Q969H0 707 aa15.31■□□□□ 0.04
SCAMP4-207ENST00000472442 FTOQ9C0B1 505 aaKnown RBP eCLIP15.31■□□□□ 0.04
SCAMP4-207ENST00000472442 COL1A1P02452 1464 aaPredicted RBP15.31■□□□□ 0.04
SCAMP4-207ENST00000472442 RFC4P35249 363 aa15.31■□□□□ 0.04
SCAMP4-207ENST00000472442 EVCP57679 992 aa15.31■□□□□ 0.04
SCAMP4-207ENST00000472442 CCT2P78371 535 aaKnown RBP15.31■□□□□ 0.04
SCAMP4-207ENST00000472442 TBC1D10CQ8IV04 446 aa15.31■□□□□ 0.04
SCAMP4-207ENST00000472442 NSUN7Q8NE18 718 aaKnown RBP15.31■□□□□ 0.04
SCAMP4-207ENST00000472442 AIDAQ96BJ3 306 aa15.31■□□□□ 0.04
SCAMP4-207ENST00000472442 GOLPH3LQ9H4A5 285 aa15.31■□□□□ 0.04
SCAMP4-207ENST00000472442 NCOA5Q9HCD5 579 aaKnown RBP15.31■□□□□ 0.04
SCAMP4-207ENST00000472442 EPB41L4AQ9HCS5 686 aaPredicted RBP15.31■□□□□ 0.04
SCAMP4-207ENST00000472442 RPS8P62241 208 aaKnown RBP15.3■□□□□ 0.04
SCAMP4-207ENST00000472442 SNW1Q13573 536 aaKnown RBP15.3■□□□□ 0.04
SCAMP4-207ENST00000472442 CCAR1Q8IX12 1150 aaKnown RBP15.3■□□□□ 0.04
SCAMP4-207ENST00000472442 ZNF274Q96GC6 653 aaPredicted RBP15.3■□□□□ 0.04
SCAMP4-207ENST00000472442 NOL10Q9BSC4 688 aaKnown RBP15.3■□□□□ 0.04
SCAMP4-207ENST00000472442 CALCOCO1Q9P1Z2 691 aa15.3■□□□□ 0.04
SCAMP4-207ENST00000472442 MBD4O95243 580 aa15.3■□□□□ 0.04
SCAMP4-207ENST00000472442 APPP05067 770 aa15.3■□□□□ 0.04
SCAMP4-207ENST00000472442 FOSBP53539 338 aa15.3■□□□□ 0.04
SCAMP4-207ENST00000472442 AOPEPQ8N6M6 819 aa15.3■□□□□ 0.04
SCAMP4-207ENST00000472442 NCOA7Q8NI08 942 aa15.3■□□□□ 0.04
SCAMP4-207ENST00000472442 ERCC4Q92889 916 aaPredicted RBP15.3■□□□□ 0.04
SCAMP4-207ENST00000472442 ARMT1Q9H993 441 aa15.3■□□□□ 0.04
SCAMP4-207ENST00000472442 CFAP45Q9UL16 551 aa15.3■□□□□ 0.04
SCAMP4-207ENST00000472442 PRC1O43663 620 aa15.3■□□□□ 0.04
SCAMP4-207ENST00000472442 H2AFXP16104 143 aaPredicted RBP15.3■□□□□ 0.04
SCAMP4-207ENST00000472442 KLRK1P26718 216 aa15.3■□□□□ 0.04
SCAMP4-207ENST00000472442 FAM84BQ96KN1 310 aaPredicted RBP15.3■□□□□ 0.04
SCAMP4-207ENST00000472442 LLPHQ9BRT6 129 aaKnown RBP15.3■□□□□ 0.04
SCAMP4-207ENST00000472442 KIF2AO00139 706 aaPredicted RBP15.29■□□□□ 0.04
SCAMP4-207ENST00000472442 CTAGE5O15320 804 aa15.29■□□□□ 0.04
SCAMP4-207ENST00000472442 BMS1Q14692 1282 aaKnown RBP15.29■□□□□ 0.04
SCAMP4-207ENST00000472442 NFIXQ14938 502 aa15.29■□□□□ 0.04
SCAMP4-207ENST00000472442 TNRC6CQ9HCJ0 1690 aaKnown RBP15.29■□□□□ 0.04
SCAMP4-207ENST00000472442 PATL2C9JE40 543 aaKnown RBP15.29■□□□□ 0.04
SCAMP4-207ENST00000472442 ADGRA1Q86SQ6 560 aa15.29■□□□□ 0.04
SCAMP4-207ENST00000472442 IFNL3Q8IZI9 196 aa15.29■□□□□ 0.04
SCAMP4-207ENST00000472442 SALL1Q9NSC2 1324 aa15.28■□□□□ 0.04
SCAMP4-207ENST00000472442 PRKAB2O43741 272 aa15.28■□□□□ 0.04
SCAMP4-207ENST00000472442 ALX1Q15699 326 aa15.28■□□□□ 0.04
SCAMP4-207ENST00000472442 E4F1Q66K89 784 aaPredicted RBP15.28■□□□□ 0.04
SCAMP4-207ENST00000472442 SYT10Q6XYQ8 523 aa15.28■□□□□ 0.04
SCAMP4-207ENST00000472442 LCORLQ8N3X6 602 aa15.28■□□□□ 0.04
SCAMP4-207ENST00000472442 L2HGDHQ9H9P8 463 aa15.28■□□□□ 0.04
SCAMP4-207ENST00000472442 ANO10Q9NW15 660 aa15.28■□□□□ 0.04
SCAMP4-207ENST00000472442 FHOD1Q9Y613 1164 aa15.28■□□□□ 0.04
SCAMP4-207ENST00000472442 GSG1L2A8MUP6 293 aa15.28■□□□□ 0.04
SCAMP4-207ENST00000472442 PPFIA3O75145 1194 aa15.28■□□□□ 0.04
SCAMP4-207ENST00000472442 CLCN6P51797 869 aa15.28■□□□□ 0.04
SCAMP4-207ENST00000472442 CCDC73Q6ZRK6 1079 aa15.28■□□□□ 0.04
SCAMP4-207ENST00000472442 NBPF11Q86T75 865 aa15.28■□□□□ 0.04
SCAMP4-207ENST00000472442 SLC51AQ86UW1 340 aa15.28■□□□□ 0.04
SCAMP4-207ENST00000472442 PPP1R13BQ96KQ4 1090 aa15.28■□□□□ 0.04
SCAMP4-207ENST00000472442 ZSCAN16Q9H4T2 348 aaPredicted RBP15.28■□□□□ 0.04
SCAMP4-207ENST00000472442 INCENPQ9NQS7 918 aa15.28■□□□□ 0.04
SCAMP4-207ENST00000472442 KCND1Q9NSA2 647 aa15.28■□□□□ 0.04
SCAMP4-207ENST00000472442 LRP2BPQ9P2M1 347 aa15.28■□□□□ 0.04
SCAMP4-207ENST00000472442 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.27■□□□□ 0.04
SCAMP4-207ENST00000472442 PTPDC1A2A3K4 754 aa15.27■□□□□ 0.04
SCAMP4-207ENST00000472442 KINO60870 393 aaKnown RBP15.27■□□□□ 0.04
SCAMP4-207ENST00000472442 GSDMDP57764 484 aa15.27■□□□□ 0.04
SCAMP4-207ENST00000472442 CYB5R4Q7L1T6 521 aa15.27■□□□□ 0.04
SCAMP4-207ENST00000472442 CEP57L1Q8IYX8 460 aa15.27■□□□□ 0.04
SCAMP4-207ENST00000472442 TACC3Q9Y6A5 838 aa15.27■□□□□ 0.04
SCAMP4-207ENST00000472442 CYP2C19P33261 490 aa15.27■□□□□ 0.04
SCAMP4-207ENST00000472442 RALYLQ86SE5 291 aaKnown RBP15.27■□□□□ 0.04
SCAMP4-207ENST00000472442 MIGA1Q8NAN2 632 aa15.27■□□□□ 0.04
SCAMP4-207ENST00000472442 NAP1L2Q9ULW6 460 aaPredicted RBP15.27■□□□□ 0.04
SCAMP4-207ENST00000472442 HPS5Q9UPZ3 1129 aa15.27■□□□□ 0.04
SCAMP4-207ENST00000472442 ZMYM6O95789 1325 aa15.27■□□□□ 0.03
SCAMP4-207ENST00000472442 ADD1P35611 737 aaKnown RBP15.27■□□□□ 0.03
SCAMP4-207ENST00000472442 FBXO33Q7Z6M2 555 aa15.27■□□□□ 0.03
SCAMP4-207ENST00000472442 TRERF1Q96PN7 1200 aa15.27■□□□□ 0.03
SCAMP4-207ENST00000472442 ABCF2Q9UG63 623 aa15.27■□□□□ 0.03
SCAMP4-207ENST00000472442 NEDD4P46934 1319 aa15.26■□□□□ 0.03
SCAMP4-207ENST00000472442 PNPLA7Q6ZV29 1317 aa15.26■□□□□ 0.03
SCAMP4-207ENST00000472442 FAM193AP78312 1265 aa15.26■□□□□ 0.03
SCAMP4-207ENST00000472442 MAPK8IP2Q13387 824 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 165 ms