RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 PDE12Q6L8Q7 609 aaKnown RBP10.11□□□□□ -0.79
SCAF4-205ENST00000472318 KRT28Q7Z3Y7 464 aa10.11□□□□□ -0.79
SCAF4-205ENST00000472318 CACTIN-AS1Q8N1I8 211 aa10.11□□□□□ -0.79
SCAF4-205ENST00000472318 IL22RA1Q8N6P7 574 aa10.11□□□□□ -0.79
SCAF4-205ENST00000472318 ABI2Q9NYB9 513 aaPredicted RBP10.11□□□□□ -0.79
SCAF4-205ENST00000472318 CROCC2H7BZ55 1655 aa10.11□□□□□ -0.79
SCAF4-205ENST00000472318 NOS3P29474 1203 aa10.1□□□□□ -0.79
SCAF4-205ENST00000472318 ZNF326Q5BKZ1 582 aaKnown RBP10.1□□□□□ -0.79
SCAF4-205ENST00000472318 TTC39BQ5VTQ0 682 aaPredicted RBP10.1□□□□□ -0.79
SCAF4-205ENST00000472318 ATCAYQ86WG3 371 aa10.1□□□□□ -0.79
SCAF4-205ENST00000472318 MAP4K3Q8IVH8 894 aa10.1□□□□□ -0.79
SCAF4-205ENST00000472318 WFDC12Q8WWY7 111 aa10.1□□□□□ -0.79
SCAF4-205ENST00000472318 NUDT16Q96DE0 195 aaKnown RBP10.1□□□□□ -0.79
SCAF4-205ENST00000472318 NWD2Q9ULI1 1742 aa10.1□□□□□ -0.79
SCAF4-205ENST00000472318 ATP11AP98196 1134 aa10.09□□□□□ -0.79
SCAF4-205ENST00000472318 SETDB1Q15047 1291 aa10.09□□□□□ -0.79
SCAF4-205ENST00000472318 FOXD4L6Q3SYB3 417 aaPredicted RBP10.09□□□□□ -0.79
SCAF4-205ENST00000472318 PRSS36Q5K4E3 855 aa10.09□□□□□ -0.79
SCAF4-205ENST00000472318 ZMYM1Q5SVZ6 1142 aa10.09□□□□□ -0.79
SCAF4-205ENST00000472318 FOXD4L3Q6VB84 417 aaPredicted RBP10.09□□□□□ -0.79
SCAF4-205ENST00000472318 TP53INP1Q96A56 240 aa10.09□□□□□ -0.79
SCAF4-205ENST00000472318 THSD7AQ9UPZ6 1657 aa10.09□□□□□ -0.79
SCAF4-205ENST00000472318 HFM1A2PYH4 1435 aa10.08□□□□□ -0.8
SCAF4-205ENST00000472318 TNS3Q68CZ2 1445 aa10.08□□□□□ -0.8
SCAF4-205ENST00000472318 SSFA2P28290 1259 aa10.08□□□□□ -0.8
SCAF4-205ENST00000472318 SCNN1AP37088 669 aa10.08□□□□□ -0.8
SCAF4-205ENST00000472318 DCAF11Q8TEB1 546 aa10.08□□□□□ -0.8
SCAF4-205ENST00000472318 MUC3BQ9H195 1237 aa10.08□□□□□ -0.8
SCAF4-205ENST00000472318 TMEM63CQ9P1W3 806 aa10.08□□□□□ -0.8
SCAF4-205ENST00000472318 MYOM1P52179 1685 aa10.08□□□□□ -0.8
SCAF4-205ENST00000472318 CCDC144AA2RUR9 1427 aa10.07□□□□□ -0.8
SCAF4-205ENST00000472318 PRAG1Q86YV5 1406 aa10.07□□□□□ -0.8
SCAF4-205ENST00000472318 NRAPQ86VF7 1730 aa10.07□□□□□ -0.8
SCAF4-205ENST00000472318 CDC42BPGQ6DT37 1551 aa10.07□□□□□ -0.8
SCAF4-205ENST00000472318 IGSF3O75054 1194 aa10.07□□□□□ -0.8
SCAF4-205ENST00000472318 CYP2E1P05181 493 aaPredicted RBP10.07□□□□□ -0.8
SCAF4-205ENST00000472318 HSPA6P17066 643 aa10.07□□□□□ -0.8
SCAF4-205ENST00000472318 IREB2P48200 963 aaKnown RBP10.07□□□□□ -0.8
SCAF4-205ENST00000472318 SPACA7Q96KW9 195 aa10.07□□□□□ -0.8
SCAF4-205ENST00000472318 ELP3Q9H9T3 547 aa10.07□□□□□ -0.8
SCAF4-205ENST00000472318 ANKRD50Q9ULJ7 1429 aa10.07□□□□□ -0.8
SCAF4-205ENST00000472318 RPLP1P05386 114 aaKnown RBP10.06□□□□□ -0.8
SCAF4-205ENST00000472318 ZNF438Q7Z4V0 828 aa10.06□□□□□ -0.8
SCAF4-205ENST00000472318 MEGF10Q96KG7 1140 aa10.06□□□□□ -0.8
SCAF4-205ENST00000472318 MRPL18Q9H0U6 180 aaKnown RBP10.06□□□□□ -0.8
SCAF4-205ENST00000472318 PPME1Q9Y570 386 aa10.06□□□□□ -0.8
SCAF4-205ENST00000472318 NAIPQ13075 1403 aa10.06□□□□□ -0.8
SCAF4-205ENST00000472318 E9PCH4 1651 aa10.06□□□□□ -0.8
SCAF4-205ENST00000472318 IQGAP3Q86VI3 1631 aa10.05□□□□□ -0.8
SCAF4-205ENST00000472318 SMNDC1O75940 238 aaKnown RBP eCLIP10.05□□□□□ -0.8
SCAF4-205ENST00000472318 XKR5Q6UX68 686 aa10.05□□□□□ -0.8
SCAF4-205ENST00000472318 TMEM130Q8N3G9 435 aa10.05□□□□□ -0.8
SCAF4-205ENST00000472318 GTF3C2Q8WUA4 911 aaPredicted RBP10.05□□□□□ -0.8
SCAF4-205ENST00000472318 EDEM1Q92611 657 aa10.05□□□□□ -0.8
SCAF4-205ENST00000472318 RASSF4Q9H2L5 321 aa10.05□□□□□ -0.8
SCAF4-205ENST00000472318 AKTIPQ9H8T0 292 aa10.05□□□□□ -0.8
SCAF4-205ENST00000472318 SPATA31A1Q5TZJ5 1347 aa10.05□□□□□ -0.8
SCAF4-205ENST00000472318 SHANK3Q9BYB0 1731 aa10.04□□□□□ -0.8
SCAF4-205ENST00000472318 CASZ1Q86V15 1759 aa10.04□□□□□ -0.8
SCAF4-205ENST00000472318 PDGFAP04085 211 aa10.04□□□□□ -0.8
SCAF4-205ENST00000472318 CDK11BP21127 795 aaKnown RBP10.04□□□□□ -0.8
SCAF4-205ENST00000472318 MPSTP25325 297 aa10.04□□□□□ -0.8
SCAF4-205ENST00000472318 EIF1AXP47813 144 aaKnown RBP10.04□□□□□ -0.8
SCAF4-205ENST00000472318 NOM1Q5C9Z4 860 aaKnown RBP10.04□□□□□ -0.8
SCAF4-205ENST00000472318 CEP135Q66GS9 1140 aa10.04□□□□□ -0.8
SCAF4-205ENST00000472318 DZIP1LQ8IYY4 767 aaKnown RBP10.04□□□□□ -0.8
SCAF4-205ENST00000472318 CEP120Q8N960 986 aa10.04□□□□□ -0.8
SCAF4-205ENST00000472318 TRAIPQ9BWF2 469 aa10.04□□□□□ -0.8
SCAF4-205ENST00000472318 NEXMIFQ5QGS0 1516 aa10.03□□□□□ -0.8
SCAF4-205ENST00000472318 F8W735 103 aaPredicted RBP10.03□□□□□ -0.8
SCAF4-205ENST00000472318 MZF1P28698 734 aaPredicted RBP10.03□□□□□ -0.8
SCAF4-205ENST00000472318 GPR162Q16538 588 aa10.03□□□□□ -0.8
SCAF4-205ENST00000472318 ADAMTSL4Q6UY14 1074 aa10.03□□□□□ -0.8
SCAF4-205ENST00000472318 Q6ZS46 218 aa10.03□□□□□ -0.8
SCAF4-205ENST00000472318 WAPLQ7Z5K2 1190 aa10.03□□□□□ -0.8
SCAF4-205ENST00000472318 PBX4Q9BYU1 374 aa10.03□□□□□ -0.8
SCAF4-205ENST00000472318 SBNO1A3KN83 1393 aa10.02□□□□□ -0.8
SCAF4-205ENST00000472318 TM4SF5O14894 197 aa10.02□□□□□ -0.81
SCAF4-205ENST00000472318 HSP90B1P14625 803 aaKnown RBP10.02□□□□□ -0.81
SCAF4-205ENST00000472318 NPR3P17342 541 aa10.02□□□□□ -0.81
SCAF4-205ENST00000472318 DNM1Q05193 864 aaKnown RBP10.02□□□□□ -0.81
SCAF4-205ENST00000472318 PHLDB3Q6NSJ2 640 aa10.02□□□□□ -0.81
SCAF4-205ENST00000472318 NCAPG2Q86XI2 1143 aa10.02□□□□□ -0.81
SCAF4-205ENST00000472318 RGS22Q8NE09 1264 aa10.02□□□□□ -0.81
SCAF4-205ENST00000472318 LACRTQ9GZZ8 138 aa10.02□□□□□ -0.81
SCAF4-205ENST00000472318 CNTN3Q9P232 1028 aa10.02□□□□□ -0.81
SCAF4-205ENST00000472318 DLC1Q96QB1 1528 aa10.02□□□□□ -0.81
SCAF4-205ENST00000472318 CHD4Q14839 1912 aa10.01□□□□□ -0.81
SCAF4-205ENST00000472318 RRBP1Q9P2E9 1410 aaKnown RBP10.01□□□□□ -0.81
SCAF4-205ENST00000472318 PCSK2P16519 638 aa10.01□□□□□ -0.81
SCAF4-205ENST00000472318 CDC27P30260 824 aa10.01□□□□□ -0.81
SCAF4-205ENST00000472318 PDE3BQ13370 1112 aa10.01□□□□□ -0.81
SCAF4-205ENST00000472318 GALNT11Q8NCW6 608 aa10.01□□□□□ -0.81
SCAF4-205ENST00000472318 GGNBP2Q9H3C7 697 aa10.01□□□□□ -0.81
SCAF4-205ENST00000472318 KANSL3Q9P2N6 904 aa10.01□□□□□ -0.81
SCAF4-205ENST00000472318 SALL4Q9UJQ4 1053 aa10.01□□□□□ -0.81
SCAF4-205ENST00000472318 ABCA3Q99758 1704 aa10.01□□□□□ -0.81
SCAF4-205ENST00000472318 ARHGEF10O15013 1369 aa10.01□□□□□ -0.81
SCAF4-205ENST00000472318 PLEKHH1Q9ULM0 1364 aa10.01□□□□□ -0.81
SCAF4-205ENST00000472318 LINC01387J3KSC0 135 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms