RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 UNCXA6NJT0 531 aa18.24■□□□□ 0.51
SNX13-205ENST00000471744 HUNKP57058 714 aa18.24■□□□□ 0.51
SNX13-205ENST00000471744 DEFB115Q30KQ5 88 aa18.24■□□□□ 0.51
SNX13-205ENST00000471744 DCAF15Q66K64 600 aa18.24■□□□□ 0.51
SNX13-205ENST00000471744 MIGA1Q8NAN2 632 aa18.24■□□□□ 0.51
SNX13-205ENST00000471744 FSD1Q9BTV5 496 aa18.24■□□□□ 0.51
SNX13-205ENST00000471744 SSC5DA1L4H1 1573 aa18.23■□□□□ 0.51
SNX13-205ENST00000471744 ATRNL1Q5VV63 1379 aa18.23■□□□□ 0.51
SNX13-205ENST00000471744 RNF113AO15541 343 aaKnown RBP18.23■□□□□ 0.51
SNX13-205ENST00000471744 IREB2P48200 963 aaKnown RBP18.23■□□□□ 0.51
SNX13-205ENST00000471744 PICALMQ13492 652 aa18.23■□□□□ 0.51
SNX13-205ENST00000471744 MAP3K11Q16584 847 aa18.23■□□□□ 0.51
SNX13-205ENST00000471744 ZSCAN29Q8IWY8 852 aaPredicted RBP18.23■□□□□ 0.51
SNX13-205ENST00000471744 RIOK1Q9BRS2 568 aaKnown RBP18.23■□□□□ 0.51
SNX13-205ENST00000471744 CRNKL1Q9BZJ0 848 aaKnown RBP18.23■□□□□ 0.51
SNX13-205ENST00000471744 ECE1P42892 770 aa18.22■□□□□ 0.51
SNX13-205ENST00000471744 DYNLL1P63167 89 aaKnown RBP18.22■□□□□ 0.51
SNX13-205ENST00000471744 HTRA3P83110 453 aa18.22■□□□□ 0.51
SNX13-205ENST00000471744 APPBP2Q92624 585 aa18.22■□□□□ 0.51
SNX13-205ENST00000471744 OSBPL5Q9H0X9 879 aaPredicted RBP18.22■□□□□ 0.51
SNX13-205ENST00000471744 DHX36Q9H2U1 1008 aaKnown RBP18.22■□□□□ 0.51
SNX13-205ENST00000471744 DDX4Q9NQI0 724 aaKnown RBP18.22■□□□□ 0.51
SNX13-205ENST00000471744 ANGEL1Q9UNK9 670 aaKnown RBP18.22■□□□□ 0.51
SNX13-205ENST00000471744 USP5P45974 858 aa18.21■□□□□ 0.51
SNX13-205ENST00000471744 TGFBRAP1Q8WUH2 860 aa18.21■□□□□ 0.51
SNX13-205ENST00000471744 AIDAQ96BJ3 306 aa18.21■□□□□ 0.51
SNX13-205ENST00000471744 CSRNP1Q96S65 589 aa18.21■□□□□ 0.51
SNX13-205ENST00000471744 PPP4R2Q9NY27 417 aa18.21■□□□□ 0.51
SNX13-205ENST00000471744 FLT1P17948 1338 aa18.21■□□□□ 0.51
SNX13-205ENST00000471744 NAV1Q8NEY1 1877 aa18.2■□□□□ 0.5
SNX13-205ENST00000471744 TRIM6-TRIM34B2RNG4 842 aa18.2■□□□□ 0.5
SNX13-205ENST00000471744 PDE4AP27815 886 aa18.2■□□□□ 0.5
SNX13-205ENST00000471744 RGMBQ6NW40 437 aa18.2■□□□□ 0.5
SNX13-205ENST00000471744 KLRG1Q96E93 195 aa18.2■□□□□ 0.5
SNX13-205ENST00000471744 USP2O75604 605 aaPredicted RBP18.19■□□□□ 0.5
SNX13-205ENST00000471744 MBD4O95243 580 aa18.19■□□□□ 0.5
SNX13-205ENST00000471744 PRKG1Q13976 671 aa18.19■□□□□ 0.5
SNX13-205ENST00000471744 LDLRAD1Q5T700 205 aa18.19■□□□□ 0.5
SNX13-205ENST00000471744 PAXIP1Q6ZW49 1069 aaPredicted RBP18.19■□□□□ 0.5
SNX13-205ENST00000471744 MAPKAPK5Q8IW41 473 aa18.19■□□□□ 0.5
SNX13-205ENST00000471744 CDAN1Q8IWY9 1227 aa18.19■□□□□ 0.5
SNX13-205ENST00000471744 ZFPM1Q8IX07 1006 aa18.19■□□□□ 0.5
SNX13-205ENST00000471744 CCDC102AQ96A19 550 aa18.19■□□□□ 0.5
SNX13-205ENST00000471744 ZNF341Q9BYN7 854 aa18.19■□□□□ 0.5
SNX13-205ENST00000471744 MKRN1Q9UHC7 482 aaKnown RBP18.19■□□□□ 0.5
SNX13-205ENST00000471744 OTOFQ9HC10 1997 aa18.19■□□□□ 0.5
SNX13-205ENST00000471744 UBE2Q2LH0YL09 131 aa18.18■□□□□ 0.5
SNX13-205ENST00000471744 ANKRD13AQ8IZ07 590 aa18.18■□□□□ 0.5
SNX13-205ENST00000471744 LCORLQ8N3X6 602 aa18.18■□□□□ 0.5
SNX13-205ENST00000471744 DNAJC5GQ8N7S2 189 aa18.18■□□□□ 0.5
SNX13-205ENST00000471744 RILPL2Q969X0 211 aa18.18■□□□□ 0.5
SNX13-205ENST00000471744 DDRGK1Q96HY6 314 aa18.18■□□□□ 0.5
SNX13-205ENST00000471744 PUS7LQ9H0K6 701 aaKnown RBP18.18■□□□□ 0.5
SNX13-205ENST00000471744 ATP8A2Q9NTI2 1148 aa18.18■□□□□ 0.5
SNX13-205ENST00000471744 PI4KBQ9UBF8 816 aa18.18■□□□□ 0.5
SNX13-205ENST00000471744 DDTLA6NHG4 134 aaPredicted RBP18.17■□□□□ 0.5
SNX13-205ENST00000471744 TBC1D12O60347 775 aa18.17■□□□□ 0.5
SNX13-205ENST00000471744 HLA-DOAP06340 250 aa18.17■□□□□ 0.5
SNX13-205ENST00000471744 GNAT2P19087 354 aa18.17■□□□□ 0.5
SNX13-205ENST00000471744 ZNF157P51786 506 aaPredicted RBP18.17■□□□□ 0.5
SNX13-205ENST00000471744 MAP3K10Q02779 954 aa18.17■□□□□ 0.5
SNX13-205ENST00000471744 ZMYM1Q5SVZ6 1142 aa18.17■□□□□ 0.5
SNX13-205ENST00000471744 TTC22Q5TAA0 569 aa18.17■□□□□ 0.5
SNX13-205ENST00000471744 MOB2Q70IA6 237 aa18.17■□□□□ 0.5
SNX13-205ENST00000471744 SH3BP5LQ7L8J4 393 aa18.17■□□□□ 0.5
SNX13-205ENST00000471744 CAPNS2Q96L46 248 aa18.17■□□□□ 0.5
SNX13-205ENST00000471744 ARMT1Q9H993 441 aa18.17■□□□□ 0.5
SNX13-205ENST00000471744 HERC5Q9UII4 1024 aaKnown RBP18.17■□□□□ 0.5
SNX13-205ENST00000471744 BAZ2AQ9UIF9 1905 aaKnown RBP18.16■□□□□ 0.5
SNX13-205ENST00000471744 DDX60LQ5H9U9 1706 aaKnown RBP18.16■□□□□ 0.5
SNX13-205ENST00000471744 HIP1O00291 1037 aa18.16■□□□□ 0.5
SNX13-205ENST00000471744 MAP3K9P80192 1104 aa18.16■□□□□ 0.5
SNX13-205ENST00000471744 SLFNL1Q499Z3 407 aa18.16■□□□□ 0.5
SNX13-205ENST00000471744 TTC6Q86TZ1 520 aa18.16■□□□□ 0.5
SNX13-205ENST00000471744 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.16■□□□□ 0.5
SNX13-205ENST00000471744 OSBP2Q969R2 916 aa18.16■□□□□ 0.5
SNX13-205ENST00000471744 CSADQ9Y600 493 aa18.16■□□□□ 0.5
SNX13-205ENST00000471744 WDR33Q9C0J8 1336 aaKnown RBP18.16■□□□□ 0.5
SNX13-205ENST00000471744 VEGFBP49765 207 aa18.15■□□□□ 0.5
SNX13-205ENST00000471744 NOGQ13253 232 aa18.15■□□□□ 0.5
SNX13-205ENST00000471744 CYP4F22Q6NT55 531 aa18.15■□□□□ 0.5
SNX13-205ENST00000471744 MIGA2Q7L4E1 593 aa18.15■□□□□ 0.5
SNX13-205ENST00000471744 FOXP4Q8IVH2 680 aaPredicted RBP18.15■□□□□ 0.5
SNX13-205ENST00000471744 AMOTL1Q8IY63 956 aa18.15■□□□□ 0.5
SNX13-205ENST00000471744 SLC10A4Q96EP9 437 aa18.15■□□□□ 0.5
SNX13-205ENST00000471744 WRNIP1Q96S55 665 aa18.15■□□□□ 0.5
SNX13-205ENST00000471744 STRBPQ96SI9 672 aaKnown RBP18.15■□□□□ 0.5
SNX13-205ENST00000471744 HELLSQ9NRZ9 838 aa18.15■□□□□ 0.5
SNX13-205ENST00000471744 ZNF112Q9UJU3 913 aa18.15■□□□□ 0.5
SNX13-205ENST00000471744 TAOK2Q9UL54 1235 aa18.15■□□□□ 0.5
SNX13-205ENST00000471744 SLC4A4Q9Y6R1 1079 aa18.15■□□□□ 0.5
SNX13-205ENST00000471744 SIPA1L1O43166 1804 aa18.14■□□□□ 0.5
SNX13-205ENST00000471744 GPAA1O43292 621 aa18.14■□□□□ 0.49
SNX13-205ENST00000471744 CHGBP05060 677 aa18.14■□□□□ 0.49
SNX13-205ENST00000471744 SLC10A3P09131 477 aa18.14■□□□□ 0.49
SNX13-205ENST00000471744 MAP2K2P36507 400 aa18.14■□□□□ 0.49
SNX13-205ENST00000471744 GIMAP6Q6P9H5 292 aa18.14■□□□□ 0.49
SNX13-205ENST00000471744 TRIM34Q9BYJ4 488 aa18.14■□□□□ 0.49
SNX13-205ENST00000471744 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.14■□□□□ 0.49
SNX13-205ENST00000471744 DCP1AQ9NPI6 582 aaPredicted RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms