RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 SF3B3Q15393 1217 aaKnown RBP7.54□□□□□ -1.2
SPEN-204ENST00000471538 CHST3Q7LGC8 479 aa7.54□□□□□ -1.2
SPEN-204ENST00000471538 TBC1D10CQ8IV04 446 aa7.54□□□□□ -1.2
SPEN-204ENST00000471538 FAM184AQ8NB25 1140 aa7.54□□□□□ -1.2
SPEN-204ENST00000471538 HELBQ8NG08 1087 aaPredicted RBP7.54□□□□□ -1.2
SPEN-204ENST00000471538 NCOA7Q8NI08 942 aa7.54□□□□□ -1.2
SPEN-204ENST00000471538 DDX11Q96FC9 970 aa7.54□□□□□ -1.2
SPEN-204ENST00000471538 STRBPQ96SI9 672 aaKnown RBP7.54□□□□□ -1.2
SPEN-204ENST00000471538 SCAND2PQ9GZW5 306 aaPredicted RBP7.54□□□□□ -1.2
SPEN-204ENST00000471538 BCL2L12Q9HB09 334 aa7.54□□□□□ -1.2
SPEN-204ENST00000471538 NCOA5Q9HCD5 579 aaKnown RBP7.54□□□□□ -1.2
SPEN-204ENST00000471538 ZNF652Q9Y2D9 606 aa7.54□□□□□ -1.2
SPEN-204ENST00000471538 PCDHGA4Q9Y5G9 962 aa7.54□□□□□ -1.2
SPEN-204ENST00000471538 ZNF804BA4D1E1 1349 aa7.54□□□□□ -1.2
SPEN-204ENST00000471538 CARMIL3Q8ND23 1372 aa7.54□□□□□ -1.2
SPEN-204ENST00000471538 COL1A1P02452 1464 aaPredicted RBP7.54□□□□□ -1.2
SPEN-204ENST00000471538 ECM29Q5VYK3 1845 aa7.54□□□□□ -1.2
SPEN-204ENST00000471538 TAF1LQ8IZX4 1826 aa7.54□□□□□ -1.2
SPEN-204ENST00000471538 TK2O00142 265 aa7.53□□□□□ -1.2
SPEN-204ENST00000471538 ZNF213O14771 459 aa7.53□□□□□ -1.2
SPEN-204ENST00000471538 LIG1P18858 919 aa7.53□□□□□ -1.2
SPEN-204ENST00000471538 MCM5P33992 734 aa7.53□□□□□ -1.2
SPEN-204ENST00000471538 IGHMBP2P38935 993 aaKnown RBP7.53□□□□□ -1.2
SPEN-204ENST00000471538 CCT2P78371 535 aaKnown RBP7.53□□□□□ -1.2
SPEN-204ENST00000471538 FGD1P98174 961 aa7.53□□□□□ -1.2
SPEN-204ENST00000471538 CHRNDQ07001 517 aa7.53□□□□□ -1.2
SPEN-204ENST00000471538 UVSSAQ2YD98 709 aa7.53□□□□□ -1.2
SPEN-204ENST00000471538 SLC27A3Q5K4L6 730 aa7.53□□□□□ -1.2
SPEN-204ENST00000471538 SLC10A5Q5PT55 438 aa7.53□□□□□ -1.2
SPEN-204ENST00000471538 RBM43Q6ZSC3 357 aaKnown RBP7.53□□□□□ -1.2
SPEN-204ENST00000471538 RGS22Q8NE09 1264 aa7.53□□□□□ -1.2
SPEN-204ENST00000471538 ANP32BQ92688 251 aaKnown RBP7.53□□□□□ -1.2
SPEN-204ENST00000471538 CHMP4CQ96CF2 233 aa7.53□□□□□ -1.2
SPEN-204ENST00000471538 TRIM44Q96DX7 344 aaPredicted RBP7.53□□□□□ -1.2
SPEN-204ENST00000471538 PGBD1Q96JS3 809 aa7.53□□□□□ -1.2
SPEN-204ENST00000471538 MPHOSPH8Q99549 860 aa7.53□□□□□ -1.2
SPEN-204ENST00000471538 EPB41L4AQ9HCS5 686 aaPredicted RBP7.53□□□□□ -1.2
SPEN-204ENST00000471538 CACNA1SQ13698 1873 aa7.53□□□□□ -1.2
SPEN-204ENST00000471538 TAF1P21675 1872 aa7.53□□□□□ -1.2
SPEN-204ENST00000471538 NID2Q14112 1375 aa7.53□□□□□ -1.2
SPEN-204ENST00000471538 FAM177BA6PVY3 158 aa7.52□□□□□ -1.2
SPEN-204ENST00000471538 SH2B2O14492 632 aaPredicted RBP7.52□□□□□ -1.2
SPEN-204ENST00000471538 IDH1O75874 414 aaKnown RBP7.52□□□□□ -1.2
SPEN-204ENST00000471538 ERFEQ4G0M1 354 aa7.52□□□□□ -1.2
SPEN-204ENST00000471538 RC3H1Q5TC82 1133 aaKnown RBP7.52□□□□□ -1.2
SPEN-204ENST00000471538 GIMAP6Q6P9H5 292 aa7.52□□□□□ -1.2
SPEN-204ENST00000471538 CYB5R4Q7L1T6 521 aa7.52□□□□□ -1.2
SPEN-204ENST00000471538 ZSCAN30Q86W11 494 aa7.52□□□□□ -1.2
SPEN-204ENST00000471538 RNF214Q8ND24 703 aa7.52□□□□□ -1.2
SPEN-204ENST00000471538 SLC16A10Q8TF71 515 aa7.52□□□□□ -1.2
SPEN-204ENST00000471538 SPATA32Q96LK8 384 aa7.52□□□□□ -1.2
SPEN-204ENST00000471538 TFIP11Q9UBB9 837 aaKnown RBP7.52□□□□□ -1.2
SPEN-204ENST00000471538 DENND2AQ9ULE3 1009 aa7.52□□□□□ -1.2
SPEN-204ENST00000471538 KIF3AQ9Y496 699 aa7.52□□□□□ -1.2
SPEN-204ENST00000471538 TACC3Q9Y6A5 838 aa7.52□□□□□ -1.2
SPEN-204ENST00000471538 TNRC6CQ9HCJ0 1690 aaKnown RBP7.52□□□□□ -1.21
SPEN-204ENST00000471538 NEDD4P46934 1319 aa7.52□□□□□ -1.21
SPEN-204ENST00000471538 KLF18A0A0U1RQI7 1052 aa7.52□□□□□ -1.21
SPEN-204ENST00000471538 PATL2C9JE40 543 aaKnown RBP7.52□□□□□ -1.21
SPEN-204ENST00000471538 H3BQV1 296 aa7.52□□□□□ -1.21
SPEN-204ENST00000471538 RGS20O76081 388 aa7.52□□□□□ -1.21
SPEN-204ENST00000471538 POLD1P28340 1107 aa7.52□□□□□ -1.21
SPEN-204ENST00000471538 BCAMP50895 628 aa7.52□□□□□ -1.21
SPEN-204ENST00000471538 MAP3K12Q12852 859 aa7.52□□□□□ -1.21
SPEN-204ENST00000471538 TBC1D9BQ66K14 1250 aa7.52□□□□□ -1.21
SPEN-204ENST00000471538 ATL3Q6DD88 541 aa7.52□□□□□ -1.21
SPEN-204ENST00000471538 RALYLQ86SE5 291 aaKnown RBP7.52□□□□□ -1.21
SPEN-204ENST00000471538 IFNL3Q8IZI9 196 aa7.52□□□□□ -1.21
SPEN-204ENST00000471538 MAGEB6Q8N7X4 407 aa7.52□□□□□ -1.21
SPEN-204ENST00000471538 ZNF526Q8TF50 670 aaPredicted RBP7.52□□□□□ -1.21
SPEN-204ENST00000471538 CDC5LQ99459 802 aaKnown RBP7.52□□□□□ -1.21
SPEN-204ENST00000471538 CLSTN2Q9H4D0 955 aa7.52□□□□□ -1.21
SPEN-204ENST00000471538 DDX19AQ9NUU7 478 aaKnown RBP7.52□□□□□ -1.21
SPEN-204ENST00000471538 NARFQ9UHQ1 456 aa7.52□□□□□ -1.21
SPEN-204ENST00000471538 RCOR1Q9UKL0 485 aa7.52□□□□□ -1.21
SPEN-204ENST00000471538 CFAP45Q9UL16 551 aa7.52□□□□□ -1.21
SPEN-204ENST00000471538 GOLGA8BA8MQT2 603 aa7.51□□□□□ -1.21
SPEN-204ENST00000471538 GSG1L2A8MUP6 293 aa7.51□□□□□ -1.21
SPEN-204ENST00000471538 GRIN3BO60391 1043 aa7.51□□□□□ -1.21
SPEN-204ENST00000471538 RPS6KA4O75676 772 aa7.51□□□□□ -1.21
SPEN-204ENST00000471538 MBD4O95243 580 aa7.51□□□□□ -1.21
SPEN-204ENST00000471538 UBE4AQ14139 1066 aa7.51□□□□□ -1.21
SPEN-204ENST00000471538 SGMS1Q86VZ5 419 aa7.51□□□□□ -1.21
SPEN-204ENST00000471538 LCORLQ8N3X6 602 aa7.51□□□□□ -1.21
SPEN-204ENST00000471538 TMC2Q8TDI7 906 aa7.51□□□□□ -1.21
SPEN-204ENST00000471538 IGDCC4Q8TDY8 1250 aa7.51□□□□□ -1.21
SPEN-204ENST00000471538 AIDAQ96BJ3 306 aa7.51□□□□□ -1.21
SPEN-204ENST00000471538 TMEM87BQ96K49 555 aa7.51□□□□□ -1.21
SPEN-204ENST00000471538 USP28Q96RU2 1077 aa7.51□□□□□ -1.21
SPEN-204ENST00000471538 NUP62CLQ9H1M0 184 aa7.51□□□□□ -1.21
SPEN-204ENST00000471538 BSDC1Q9NW68 430 aaPredicted RBP7.51□□□□□ -1.21
SPEN-204ENST00000471538 NOL7Q9UMY1 257 aaKnown RBP7.51□□□□□ -1.21
SPEN-204ENST00000471538 ANGEL1Q9UNK9 670 aaKnown RBP7.51□□□□□ -1.21
SPEN-204ENST00000471538 MAST2Q6P0Q8 1798 aa7.51□□□□□ -1.21
SPEN-204ENST00000471538 KIAA1551Q9HCM1 1747 aa7.51□□□□□ -1.21
SPEN-204ENST00000471538 PDS5AQ29RF7 1337 aaKnown RBP7.5□□□□□ -1.21
SPEN-204ENST00000471538 IRS2Q9Y4H2 1338 aa7.5□□□□□ -1.21
SPEN-204ENST00000471538 B4E1Z4 1266 aa7.5□□□□□ -1.21
SPEN-204ENST00000471538 NR1I2O75469 434 aa7.5□□□□□ -1.21
SPEN-204ENST00000471538 GNAT2P19087 354 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms