RNA–Protein interactions for RNA: ENST00000471427.1

POLR1A-206, Transcript of RNA polymerase I subunit A, humanhuman

TSL 2

Gene POLR1A, Length 290 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-206ENST00000471427 PDE3AQ14432 1141 aa11.78□□□□□ -0.52
POLR1A-206ENST00000471427 CCL15Q16663 113 aa11.78□□□□□ -0.52
POLR1A-206ENST00000471427 TTC39AQ5SRH9 613 aa11.78□□□□□ -0.52
POLR1A-206ENST00000471427 TMED8Q6PL24 325 aaPredicted RBP11.78□□□□□ -0.52
POLR1A-206ENST00000471427 PI16Q6UXB8 463 aa11.78□□□□□ -0.52
POLR1A-206ENST00000471427 EAF2Q96CJ1 260 aaPredicted RBP11.78□□□□□ -0.52
POLR1A-206ENST00000471427 OTUD5Q96G74 571 aa11.78□□□□□ -0.52
POLR1A-206ENST00000471427 DBNDD2Q9BQY9 259 aa11.78□□□□□ -0.52
POLR1A-206ENST00000471427 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.78□□□□□ -0.52
POLR1A-206ENST00000471427 LRP2BPQ9P2M1 347 aa11.78□□□□□ -0.52
POLR1A-206ENST00000471427 KCNH4Q9UQ05 1017 aa11.78□□□□□ -0.52
POLR1A-206ENST00000471427 CYP2E1P05181 493 aaPredicted RBP11.77□□□□□ -0.53
POLR1A-206ENST00000471427 INPP5BP32019 993 aa11.77□□□□□ -0.53
POLR1A-206ENST00000471427 FBXO46Q6PJ61 603 aaPredicted RBP11.77□□□□□ -0.53
POLR1A-206ENST00000471427 SH3BP5LQ7L8J4 393 aa11.77□□□□□ -0.53
POLR1A-206ENST00000471427 ZFYVE28Q9HCC9 887 aa11.77□□□□□ -0.53
POLR1A-206ENST00000471427 DDX4Q9NQI0 724 aaKnown RBP11.77□□□□□ -0.53
POLR1A-206ENST00000471427 RAI14Q9P0K7 980 aa11.77□□□□□ -0.53
POLR1A-206ENST00000471427 DBNLQ9UJU6 430 aaKnown RBP11.77□□□□□ -0.53
POLR1A-206ENST00000471427 MYH2Q9UKX2 1941 aa11.77□□□□□ -0.53
POLR1A-206ENST00000471427 RFX7Q2KHR2 1363 aa11.77□□□□□ -0.53
POLR1A-206ENST00000471427 ATRNL1Q5VV63 1379 aa11.77□□□□□ -0.53
POLR1A-206ENST00000471427 DDTLA6NHG4 134 aaPredicted RBP11.76□□□□□ -0.53
POLR1A-206ENST00000471427 CXCL11O14625 94 aa11.76□□□□□ -0.53
POLR1A-206ENST00000471427 CTNND1O60716 968 aaKnown RBP11.76□□□□□ -0.53
POLR1A-206ENST00000471427 HMMRO75330 724 aa11.76□□□□□ -0.53
POLR1A-206ENST00000471427 BAG3O95817 575 aa11.76□□□□□ -0.53
POLR1A-206ENST00000471427 PLCG2P16885 1265 aa11.76□□□□□ -0.53
POLR1A-206ENST00000471427 SP3Q02447 781 aa11.76□□□□□ -0.53
POLR1A-206ENST00000471427 FAM43AQ8N2R8 423 aa11.76□□□□□ -0.53
POLR1A-206ENST00000471427 ERO1AQ96HE7 468 aa11.76□□□□□ -0.53
POLR1A-206ENST00000471427 HPS5Q9UPZ3 1129 aa11.76□□□□□ -0.53
POLR1A-206ENST00000471427 BTBD19C9JJ37 291 aa11.75□□□□□ -0.53
POLR1A-206ENST00000471427 TLR2O60603 784 aa11.75□□□□□ -0.53
POLR1A-206ENST00000471427 ARHGEF6Q15052 776 aa11.75□□□□□ -0.53
POLR1A-206ENST00000471427 NAA16Q6N069 864 aaPredicted RBP11.75□□□□□ -0.53
POLR1A-206ENST00000471427 CERS3Q8IU89 383 aa11.75□□□□□ -0.53
POLR1A-206ENST00000471427 ZSCAN29Q8IWY8 852 aaPredicted RBP11.75□□□□□ -0.53
POLR1A-206ENST00000471427 SIRT2Q8IXJ6 389 aa11.75□□□□□ -0.53
POLR1A-206ENST00000471427 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.75□□□□□ -0.53
POLR1A-206ENST00000471427 RHPN1Q8TCX5 695 aa11.75□□□□□ -0.53
POLR1A-206ENST00000471427 CCDC8Q9H0W5 538 aaPredicted RBP11.75□□□□□ -0.53
POLR1A-206ENST00000471427 SNRKQ9NRH2 765 aa11.75□□□□□ -0.53
POLR1A-206ENST00000471427 COG6Q9Y2V7 657 aa11.75□□□□□ -0.53
POLR1A-206ENST00000471427 RAB11FIP3O75154 756 aa11.74□□□□□ -0.53
POLR1A-206ENST00000471427 PTPRAP18433 802 aa11.74□□□□□ -0.53
POLR1A-206ENST00000471427 ZAP70P43403 619 aa11.74□□□□□ -0.53
POLR1A-206ENST00000471427 MOGSQ13724 837 aa11.74□□□□□ -0.53
POLR1A-206ENST00000471427 TAF1CQ15572 869 aaPredicted RBP11.74□□□□□ -0.53
POLR1A-206ENST00000471427 OTOP1Q7RTM1 612 aa11.74□□□□□ -0.53
POLR1A-206ENST00000471427 ANKRD23Q86SG2 305 aa11.74□□□□□ -0.53
POLR1A-206ENST00000471427 SCYL3Q8IZE3 742 aa11.74□□□□□ -0.53
POLR1A-206ENST00000471427 KIF1BPQ96EK5 621 aa11.74□□□□□ -0.53
POLR1A-206ENST00000471427 DHX36Q9H2U1 1008 aaKnown RBP11.74□□□□□ -0.53
POLR1A-206ENST00000471427 EXOC6BQ9Y2D4 811 aa11.74□□□□□ -0.53
POLR1A-206ENST00000471427 AFG3L2Q9Y4W6 797 aa11.74□□□□□ -0.53
POLR1A-206ENST00000471427 COL2A1P02458 1487 aaPredicted RBP11.74□□□□□ -0.53
POLR1A-206ENST00000471427 OTOFQ9HC10 1997 aa11.74□□□□□ -0.53
POLR1A-206ENST00000471427 MLLT1Q03111 559 aaPredicted RBP11.73□□□□□ -0.53
POLR1A-206ENST00000471427 AK9Q5TCS8 1911 aa11.73□□□□□ -0.53
POLR1A-206ENST00000471427 FASTKD5Q7L8L6 764 aaKnown RBP11.73□□□□□ -0.53
POLR1A-206ENST00000471427 METTL16Q86W50 562 aaKnown RBP11.73□□□□□ -0.53
POLR1A-206ENST00000471427 FOXP4Q8IVH2 680 aaPredicted RBP11.73□□□□□ -0.53
POLR1A-206ENST00000471427 CLASRPQ8N2M8 674 aaKnown RBP11.73□□□□□ -0.53
POLR1A-206ENST00000471427 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.73□□□□□ -0.53
POLR1A-206ENST00000471427 NOL10Q9BSC4 688 aaKnown RBP11.73□□□□□ -0.53
POLR1A-206ENST00000471427 OSBPL5Q9H0X9 879 aaPredicted RBP11.73□□□□□ -0.53
POLR1A-206ENST00000471427 EFCC1Q9HA90 598 aa11.73□□□□□ -0.53
POLR1A-206ENST00000471427 PIH1D3Q9NQM4 214 aaKnown RBP11.73□□□□□ -0.53
POLR1A-206ENST00000471427 PICK1Q9NRD5 415 aa11.73□□□□□ -0.53
POLR1A-206ENST00000471427 TLR7Q9NYK1 1049 aaKnown RBP11.73□□□□□ -0.53
POLR1A-206ENST00000471427 PI4KBQ9UBF8 816 aa11.73□□□□□ -0.53
POLR1A-206ENST00000471427 HERC5Q9UII4 1024 aaKnown RBP11.73□□□□□ -0.53
POLR1A-206ENST00000471427 PTPN22Q9Y2R2 807 aa11.73□□□□□ -0.53
POLR1A-206ENST00000471427 TRIM17Q9Y577 477 aa11.73□□□□□ -0.53
POLR1A-206ENST00000471427 ZHX2Q9Y6X8 837 aa11.73□□□□□ -0.53
POLR1A-206ENST00000471427 A0A0G2JLL6 359 aaPredicted RBP11.72□□□□□ -0.53
POLR1A-206ENST00000471427 GNRH1P01148 92 aa11.72□□□□□ -0.53
POLR1A-206ENST00000471427 PICALMQ13492 652 aa11.72□□□□□ -0.53
POLR1A-206ENST00000471427 C17orf99Q6UX52 265 aa11.72□□□□□ -0.53
POLR1A-206ENST00000471427 PRRT2Q7Z6L0 340 aaPredicted RBP11.72□□□□□ -0.53
POLR1A-206ENST00000471427 AACSQ86V21 672 aa11.72□□□□□ -0.53
POLR1A-206ENST00000471427 TEX11Q8IYF3 940 aa11.72□□□□□ -0.53
POLR1A-206ENST00000471427 SH3RF3Q8TEJ3 882 aaPredicted RBP11.72□□□□□ -0.53
POLR1A-206ENST00000471427 TBC1D2Q9BYX2 928 aa11.72□□□□□ -0.53
POLR1A-206ENST00000471427 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.72□□□□□ -0.53
POLR1A-206ENST00000471427 AATFQ9NY61 560 aaKnown RBP eCLIP11.72□□□□□ -0.53
POLR1A-206ENST00000471427 SLC45A1Q9Y2W3 748 aa11.72□□□□□ -0.53
POLR1A-206ENST00000471427 PDHXO00330 501 aa11.71□□□□□ -0.53
POLR1A-206ENST00000471427 MAP3K12Q12852 859 aa11.71□□□□□ -0.53
POLR1A-206ENST00000471427 TTF1Q15361 905 aaPredicted RBP11.71□□□□□ -0.53
POLR1A-206ENST00000471427 GPAT2Q6NUI2 795 aa11.71□□□□□ -0.53
POLR1A-206ENST00000471427 ADGRA1Q86SQ6 560 aa11.71□□□□□ -0.53
POLR1A-206ENST00000471427 CD99L2Q8TCZ2 262 aa11.71□□□□□ -0.53
POLR1A-206ENST00000471427 GINM1Q9NU53 330 aa11.71□□□□□ -0.53
POLR1A-206ENST00000471427 CYP7A1P22680 504 aa11.7□□□□□ -0.54
POLR1A-206ENST00000471427 CAP2P40123 477 aa11.7□□□□□ -0.54
POLR1A-206ENST00000471427 PRMT2P55345 433 aa11.7□□□□□ -0.54
POLR1A-206ENST00000471427 CAP1Q01518 475 aa11.7□□□□□ -0.54
POLR1A-206ENST00000471427 TGFBRAP1Q8WUH2 860 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms