RNA–Protein interactions for RNA: ENST00000470815.1

HERC3-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-208ENST00000470815 NPHS2Q9NP85 383 aa6.09□□□□□ -1.43
HERC3-208ENST00000470815 VAV3Q9UKW4 847 aa6.09□□□□□ -1.43
HERC3-208ENST00000470815 DBX1A6NMT0 343 aa6.08□□□□□ -1.44
HERC3-208ENST00000470815 FARP2O94887 1054 aaPredicted RBP6.08□□□□□ -1.44
HERC3-208ENST00000470815 FAM87AP0C7U9 286 aa6.08□□□□□ -1.44
HERC3-208ENST00000470815 PRKCQQ04759 706 aa6.08□□□□□ -1.44
HERC3-208ENST00000470815 TMCO4Q5TGY1 634 aa6.08□□□□□ -1.44
HERC3-208ENST00000470815 PLD6Q8N2A8 252 aaKnown RBP6.08□□□□□ -1.44
HERC3-208ENST00000470815 PIDD1Q9HB75 910 aa6.08□□□□□ -1.44
HERC3-208ENST00000470815 RC3H2Q9HBD1 1191 aaKnown RBP6.08□□□□□ -1.44
HERC3-208ENST00000470815 GIPC1O14908 333 aa6.07□□□□□ -1.44
HERC3-208ENST00000470815 SLFN14P0C7P3 912 aa6.07□□□□□ -1.44
HERC3-208ENST00000470815 CD8BP10966 210 aa6.07□□□□□ -1.44
HERC3-208ENST00000470815 ATP2B2Q01814 1243 aa6.07□□□□□ -1.44
HERC3-208ENST00000470815 TRIM26Q12899 539 aaPredicted RBP6.07□□□□□ -1.44
HERC3-208ENST00000470815 FBXO33Q7Z6M2 555 aa6.07□□□□□ -1.44
HERC3-208ENST00000470815 EPS8L3Q8TE67 593 aaKnown RBP6.07□□□□□ -1.44
HERC3-208ENST00000470815 TMEM40Q8WWA1 233 aa6.07□□□□□ -1.44
HERC3-208ENST00000470815 FAM168AQ92567 244 aa6.07□□□□□ -1.44
HERC3-208ENST00000470815 FRMD6Q96NE9 622 aa6.07□□□□□ -1.44
HERC3-208ENST00000470815 FANCD2OSQ96PS1 177 aa6.07□□□□□ -1.44
HERC3-208ENST00000470815 ABCB6Q9NP58 842 aa6.07□□□□□ -1.44
HERC3-208ENST00000470815 KRT82Q9NSB4 513 aa6.07□□□□□ -1.44
HERC3-208ENST00000470815 MBNL3Q9NUK0 354 aaKnown RBP6.07□□□□□ -1.44
HERC3-208ENST00000470815 TRAK1Q9UPV9 953 aa6.07□□□□□ -1.44
HERC3-208ENST00000470815 PRPF40AO75400 957 aaKnown RBP6.06□□□□□ -1.44
HERC3-208ENST00000470815 RNASE1P07998 156 aaKnown RBP6.06□□□□□ -1.44
HERC3-208ENST00000470815 MAPK8P45983 427 aa6.06□□□□□ -1.44
HERC3-208ENST00000470815 ID3Q02535 119 aa6.06□□□□□ -1.44
HERC3-208ENST00000470815 BNIP3Q12983 259 aa6.06□□□□□ -1.44
HERC3-208ENST00000470815 CDK5R2Q13319 367 aa6.06□□□□□ -1.44
HERC3-208ENST00000470815 IFI16Q16666 785 aaKnown RBP6.06□□□□□ -1.44
HERC3-208ENST00000470815 KIF4BQ2VIQ3 1234 aa6.06□□□□□ -1.44
HERC3-208ENST00000470815 SMYD4Q8IYR2 804 aaPredicted RBP6.06□□□□□ -1.44
HERC3-208ENST00000470815 FAM181AQ8N9Y4 354 aa6.06□□□□□ -1.44
HERC3-208ENST00000470815 SRCIN1Q9C0H9 1055 aa6.06□□□□□ -1.44
HERC3-208ENST00000470815 CCDC86Q9H6F5 360 aaKnown RBP6.06□□□□□ -1.44
HERC3-208ENST00000470815 LGR6Q9HBX8 967 aa6.06□□□□□ -1.44
HERC3-208ENST00000470815 PCDHGC5Q9Y5F6 944 aa6.06□□□□□ -1.44
HERC3-208ENST00000470815 LDHBP07195 334 aaKnown RBP6.05□□□□□ -1.44
HERC3-208ENST00000470815 LIG1P18858 919 aa6.05□□□□□ -1.44
HERC3-208ENST00000470815 GRM2Q14416 872 aa6.05□□□□□ -1.44
HERC3-208ENST00000470815 PKN1Q16512 942 aa6.05□□□□□ -1.44
HERC3-208ENST00000470815 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.05□□□□□ -1.44
HERC3-208ENST00000470815 EAPPQ56P03 285 aaPredicted RBP6.05□□□□□ -1.44
HERC3-208ENST00000470815 ANKRD24Q8TF21 1146 aa6.05□□□□□ -1.44
HERC3-208ENST00000470815 NLRP2Q9NX02 1062 aa6.05□□□□□ -1.44
HERC3-208ENST00000470815 ADAMTS6Q9UKP5 1117 aa6.05□□□□□ -1.44
HERC3-208ENST00000470815 TMEM265A0A087WTH1 108 aa6.04□□□□□ -1.44
HERC3-208ENST00000470815 TMEM238LA0A1B0GVL6 79 aa6.04□□□□□ -1.44
HERC3-208ENST00000470815 ZNF862O60290 1169 aa6.04□□□□□ -1.44
HERC3-208ENST00000470815 GADD45BO75293 160 aaPredicted RBP6.04□□□□□ -1.44
HERC3-208ENST00000470815 CEACAM5P06731 702 aa6.04□□□□□ -1.44
HERC3-208ENST00000470815 XRCC5P13010 732 aaKnown RBP6.04□□□□□ -1.44
HERC3-208ENST00000470815 FBLN7Q53RD9 439 aa6.04□□□□□ -1.44
HERC3-208ENST00000470815 LCE4AQ5TA78 99 aa6.04□□□□□ -1.44
HERC3-208ENST00000470815 SPOCD1Q6ZMY3 1216 aa6.04□□□□□ -1.44
HERC3-208ENST00000470815 LRRN4CLQ8ND94 238 aa6.04□□□□□ -1.44
HERC3-208ENST00000470815 BHLHE22Q8NFJ8 381 aaPredicted RBP6.04□□□□□ -1.44
HERC3-208ENST00000470815 PI4K2BQ8TCG2 481 aa6.04□□□□□ -1.44
HERC3-208ENST00000470815 WDR89Q96FK6 387 aaPredicted RBP6.04□□□□□ -1.44
HERC3-208ENST00000470815 HRASLS5Q96KN8 279 aa6.04□□□□□ -1.44
HERC3-208ENST00000470815 BCO2Q9BYV7 579 aa6.04□□□□□ -1.44
HERC3-208ENST00000470815 DISC1Q9NRI5 854 aa6.04□□□□□ -1.44
HERC3-208ENST00000470815 WWC3Q9ULE0 1092 aa6.04□□□□□ -1.44
HERC3-208ENST00000470815 GSTP1P09211 210 aaKnown RBP6.03□□□□□ -1.44
HERC3-208ENST00000470815 MFAP1P55081 439 aaKnown RBP6.03□□□□□ -1.44
HERC3-208ENST00000470815 OXCT1P55809 520 aa6.03□□□□□ -1.44
HERC3-208ENST00000470815 FAAP100Q0VG06 881 aa6.03□□□□□ -1.44
HERC3-208ENST00000470815 ZNF124Q15973 351 aa6.03□□□□□ -1.44
HERC3-208ENST00000470815 ANGEL2Q5VTE6 544 aaKnown RBP6.03□□□□□ -1.44
HERC3-208ENST00000470815 PI16Q6UXB8 463 aa6.03□□□□□ -1.44
HERC3-208ENST00000470815 FLAD1Q8NFF5 587 aa6.03□□□□□ -1.44
HERC3-208ENST00000470815 SETDB2Q96T68 719 aa6.03□□□□□ -1.44
HERC3-208ENST00000470815 DUSP23Q9BVJ7 150 aa6.03□□□□□ -1.44
HERC3-208ENST00000470815 PCOLCE2Q9UKZ9 415 aa6.03□□□□□ -1.44
HERC3-208ENST00000470815 U3KQE9 123 aa6.03□□□□□ -1.44
HERC3-208ENST00000470815 GNA15P30679 374 aa6.02□□□□□ -1.45
HERC3-208ENST00000470815 TTLL4Q14679 1199 aa6.02□□□□□ -1.45
HERC3-208ENST00000470815 AOC3Q16853 763 aa6.02□□□□□ -1.45
HERC3-208ENST00000470815 KRTAP19-4Q3LI73 84 aa6.02□□□□□ -1.45
HERC3-208ENST00000470815 SLC23A3Q6PIS1 610 aa6.02□□□□□ -1.45
HERC3-208ENST00000470815 KSR1Q8IVT5 923 aa6.02□□□□□ -1.45
HERC3-208ENST00000470815 C3orf58Q8NDZ4 430 aa6.02□□□□□ -1.45
HERC3-208ENST00000470815 SLC38A3Q99624 504 aa6.02□□□□□ -1.45
HERC3-208ENST00000470815 TNKS2Q9H2K2 1166 aa6.02□□□□□ -1.45
HERC3-208ENST00000470815 PPP4R2Q9NY27 417 aa6.02□□□□□ -1.45
HERC3-208ENST00000470815 SPG7Q9UQ90 795 aa6.02□□□□□ -1.45
HERC3-208ENST00000470815 SNX11Q9Y5W9 270 aa6.02□□□□□ -1.45
HERC3-208ENST00000470815 ARHGAP27Q6ZUM4 889 aa6.01□□□□□ -1.45
HERC3-208ENST00000470815 PDZD3Q86UT5 571 aa6.01□□□□□ -1.45
HERC3-208ENST00000470815 OSBPL7Q9BZF2 842 aa6.01□□□□□ -1.45
HERC3-208ENST00000470815 PPM1HQ9ULR3 514 aa6.01□□□□□ -1.45
HERC3-208ENST00000470815 PLAGL2Q9UPG8 496 aa6.01□□□□□ -1.45
HERC3-208ENST00000470815 LEFTY1O75610 366 aa6□□□□□ -1.45
HERC3-208ENST00000470815 GSTT1P30711 240 aa6□□□□□ -1.45
HERC3-208ENST00000470815 CD96P40200 585 aa6□□□□□ -1.45
HERC3-208ENST00000470815 PPP2R3AQ06190 1150 aa6□□□□□ -1.45
HERC3-208ENST00000470815 MESP2Q0VG99 397 aa6□□□□□ -1.45
HERC3-208ENST00000470815 NXPE4Q6UWF7 544 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms