RNA–Protein interactions for RNA: ENST00000470563.5

RBM39-227, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-227ENST00000470563 ENPP3O14638 875 aa8.05□□□□□ -1.12
RBM39-227ENST00000470563 U2SURPO15042 1029 aaKnown RBP8.05□□□□□ -1.12
RBM39-227ENST00000470563 SMAD7O15105 426 aaKnown RBP8.05□□□□□ -1.12
RBM39-227ENST00000470563 ZNF862O60290 1169 aa8.05□□□□□ -1.12
RBM39-227ENST00000470563 HOXB4P17483 251 aaPredicted RBP8.05□□□□□ -1.12
RBM39-227ENST00000470563 MAOBP27338 520 aa8.05□□□□□ -1.12
RBM39-227ENST00000470563 HGSNATQ68CP4 663 aa8.05□□□□□ -1.12
RBM39-227ENST00000470563 SDE2Q6IQ49 451 aa8.05□□□□□ -1.12
RBM39-227ENST00000470563 HDXQ7Z353 690 aa8.05□□□□□ -1.12
RBM39-227ENST00000470563 FAM169BQ8N8A8 192 aa8.05□□□□□ -1.12
RBM39-227ENST00000470563 TRIM55Q9BYV6 548 aa8.05□□□□□ -1.12
RBM39-227ENST00000470563 TMX1Q9H3N1 280 aa8.05□□□□□ -1.12
RBM39-227ENST00000470563 SLC12A7Q9Y666 1083 aa8.05□□□□□ -1.12
RBM39-227ENST00000470563 LOC100289279A0A1B0GTE1 492 aa8.04□□□□□ -1.12
RBM39-227ENST00000470563 MEGF11A6BM72 1044 aa8.04□□□□□ -1.12
RBM39-227ENST00000470563 ZC3H12AQ5D1E8 599 aaKnown RBP8.04□□□□□ -1.12
RBM39-227ENST00000470563 TMEM40Q8WWA1 233 aa8.04□□□□□ -1.12
RBM39-227ENST00000470563 KCNB2Q92953 911 aa8.04□□□□□ -1.12
RBM39-227ENST00000470563 ANAPC16Q96DE5 110 aa8.04□□□□□ -1.12
RBM39-227ENST00000470563 ACTR10Q9NZ32 417 aa8.04□□□□□ -1.12
RBM39-227ENST00000470563 MRVI1Q9Y6F6 885 aa8.04□□□□□ -1.12
RBM39-227ENST00000470563 SHISA8B8ZZ34 492 aa8.03□□□□□ -1.12
RBM39-227ENST00000470563 HTR3BO95264 441 aa8.03□□□□□ -1.12
RBM39-227ENST00000470563 MCM4P33991 863 aa8.03□□□□□ -1.12
RBM39-227ENST00000470563 ERVK-24P63145 666 aa8.03□□□□□ -1.12
RBM39-227ENST00000470563 PDE4BQ07343 736 aa8.03□□□□□ -1.12
RBM39-227ENST00000470563 RASGRF1Q13972 1273 aa8.03□□□□□ -1.12
RBM39-227ENST00000470563 MLECQ14165 292 aa8.03□□□□□ -1.12
RBM39-227ENST00000470563 DDR2Q16832 855 aa8.03□□□□□ -1.12
RBM39-227ENST00000470563 CDCP2Q5VXM1 449 aa8.03□□□□□ -1.12
RBM39-227ENST00000470563 EGFLAMQ63HQ2 1017 aa8.03□□□□□ -1.12
RBM39-227ENST00000470563 LRFN4Q6PJG9 635 aa8.03□□□□□ -1.12
RBM39-227ENST00000470563 NLGN1Q8N2Q7 840 aa8.03□□□□□ -1.12
RBM39-227ENST00000470563 GALNT11Q8NCW6 608 aa8.03□□□□□ -1.12
RBM39-227ENST00000470563 HNRNPLLQ8WVV9 542 aaKnown RBP8.03□□□□□ -1.12
RBM39-227ENST00000470563 SLC7A3Q8WY07 619 aa8.03□□□□□ -1.12
RBM39-227ENST00000470563 KLHDC7BQ96G42 594 aa8.03□□□□□ -1.12
RBM39-227ENST00000470563 SUGCTQ9HAC7 445 aa8.03□□□□□ -1.12
RBM39-227ENST00000470563 SNTG2Q9NY99 539 aa8.03□□□□□ -1.12
RBM39-227ENST00000470563 GMIPQ9P107 970 aa8.03□□□□□ -1.12
RBM39-227ENST00000470563 PCDHA4Q9UN74 947 aa8.03□□□□□ -1.12
RBM39-227ENST00000470563 R3HCC1Q9Y3T6 440 aaKnown RBP8.03□□□□□ -1.12
RBM39-227ENST00000470563 TNFRSF10CO14798 259 aa8.02□□□□□ -1.13
RBM39-227ENST00000470563 CELA2BP08218 269 aaPredicted RBP8.02□□□□□ -1.13
RBM39-227ENST00000470563 NCLP19338 710 aaKnown RBP8.02□□□□□ -1.13
RBM39-227ENST00000470563 HSD3B2P26439 372 aa8.02□□□□□ -1.13
RBM39-227ENST00000470563 CD68P34810 354 aaPredicted RBP8.02□□□□□ -1.13
RBM39-227ENST00000470563 BMS1Q14692 1282 aaKnown RBP8.02□□□□□ -1.13
RBM39-227ENST00000470563 WIPI1Q5MNZ9 446 aaPredicted RBP8.02□□□□□ -1.13
RBM39-227ENST00000470563 MPRIPQ6WCQ1 1025 aa8.02□□□□□ -1.13
RBM39-227ENST00000470563 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.02□□□□□ -1.13
RBM39-227ENST00000470563 CCDC81Q6ZN84 652 aa8.02□□□□□ -1.13
RBM39-227ENST00000470563 GK5Q6ZS86 529 aa8.02□□□□□ -1.13
RBM39-227ENST00000470563 FBXO11Q86XK2 927 aa8.02□□□□□ -1.13
RBM39-227ENST00000470563 JMYQ8N9B5 988 aa8.02□□□□□ -1.13
RBM39-227ENST00000470563 PLPPR2Q96GM1 343 aa8.02□□□□□ -1.13
RBM39-227ENST00000470563 DEPDC7Q96QD5 511 aa8.02□□□□□ -1.13
RBM39-227ENST00000470563 DLL1O00548 723 aa8.01□□□□□ -1.13
RBM39-227ENST00000470563 DEAF1O75398 565 aaPredicted RBP8.01□□□□□ -1.13
RBM39-227ENST00000470563 CTSBP07858 339 aa8.01□□□□□ -1.13
RBM39-227ENST00000470563 SLFN14P0C7P3 912 aa8.01□□□□□ -1.13
RBM39-227ENST00000470563 GUCY2CP25092 1073 aa8.01□□□□□ -1.13
RBM39-227ENST00000470563 CAP2P40123 477 aa8.01□□□□□ -1.13
RBM39-227ENST00000470563 CCNFP41002 786 aa8.01□□□□□ -1.13
RBM39-227ENST00000470563 FXNQ16595 210 aa8.01□□□□□ -1.13
RBM39-227ENST00000470563 JAZF1Q86VZ6 243 aa8.01□□□□□ -1.13
RBM39-227ENST00000470563 WDR18Q9BV38 432 aa8.01□□□□□ -1.13
RBM39-227ENST00000470563 GSX1Q9H4S2 264 aaPredicted RBP8.01□□□□□ -1.13
RBM39-227ENST00000470563 CNNM2Q9H8M5 875 aa8.01□□□□□ -1.13
RBM39-227ENST00000470563 FANCGO15287 622 aa8□□□□□ -1.13
RBM39-227ENST00000470563 ADAM11O75078 769 aa8□□□□□ -1.13
RBM39-227ENST00000470563 ECEL1O95672 775 aa8□□□□□ -1.13
RBM39-227ENST00000470563 HSP90B1P14625 803 aaKnown RBP8□□□□□ -1.13
RBM39-227ENST00000470563 INPP5AQ14642 412 aa8□□□□□ -1.13
RBM39-227ENST00000470563 FOXD4L6Q3SYB3 417 aaPredicted RBP8□□□□□ -1.13
RBM39-227ENST00000470563 EXOSC6Q5RKV6 272 aaKnown RBP8□□□□□ -1.13
RBM39-227ENST00000470563 TXNDC11Q6PKC3 985 aa8□□□□□ -1.13
RBM39-227ENST00000470563 FOXD4L3Q6VB84 417 aaPredicted RBP8□□□□□ -1.13
RBM39-227ENST00000470563 ACSBG1Q96GR2 724 aa8□□□□□ -1.13
RBM39-227ENST00000470563 TMPRSS13Q9BYE2 586 aa8□□□□□ -1.13
RBM39-227ENST00000470563 WNT10AQ9GZT5 417 aa8□□□□□ -1.13
RBM39-227ENST00000470563 PIK3R2O00459 728 aa7.99□□□□□ -1.13
RBM39-227ENST00000470563 AOC2O75106 756 aa7.99□□□□□ -1.13
RBM39-227ENST00000470563 C8orf86Q6ZUL3 223 aa7.99□□□□□ -1.13
RBM39-227ENST00000470563 FMR1NBQ8N0W7 255 aaPredicted RBP7.99□□□□□ -1.13
RBM39-227ENST00000470563 ST13P5Q8NFI4 369 aaPredicted RBP7.99□□□□□ -1.13
RBM39-227ENST00000470563 SRPK1Q96SB4 655 aaKnown RBP7.99□□□□□ -1.13
RBM39-227ENST00000470563 REV1Q9UBZ9 1251 aa7.99□□□□□ -1.13
RBM39-227ENST00000470563 A0A1W2PQH9 124 aa7.98□□□□□ -1.13
RBM39-227ENST00000470563 NME1P15531 152 aaKnown RBP7.98□□□□□ -1.13
RBM39-227ENST00000470563 PDE3AQ14432 1141 aa7.98□□□□□ -1.13
RBM39-227ENST00000470563 LYPD4Q6UWN0 246 aa7.98□□□□□ -1.13
RBM39-227ENST00000470563 SLFN12Q8IYM2 578 aa7.98□□□□□ -1.13
RBM39-227ENST00000470563 CELF2-AS1Q8N7Q2 184 aa7.98□□□□□ -1.13
RBM39-227ENST00000470563 SMG8Q8ND04 991 aaKnown RBP7.98□□□□□ -1.13
RBM39-227ENST00000470563 ELMO3Q96BJ8 720 aa7.98□□□□□ -1.13
RBM39-227ENST00000470563 ZNF775Q96BV0 537 aaPredicted RBP7.98□□□□□ -1.13
RBM39-227ENST00000470563 CRIM1Q9NZV1 1036 aa7.98□□□□□ -1.13
RBM39-227ENST00000470563 MAPK8IP1Q9UQF2 711 aa7.98□□□□□ -1.13
RBM39-227ENST00000470563 SPDYE3A6NKU9 549 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms