RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 RASIP1Q5U651 963 aa9.92□□□□□ -0.82
COL11A1-208ENST00000470170 OGFOD3Q6PK18 319 aa9.92□□□□□ -0.82
COL11A1-208ENST00000470170 FAM8A1Q9UBU6 413 aa9.92□□□□□ -0.82
COL11A1-208ENST00000470170 CCDC39Q9UFE4 941 aa9.92□□□□□ -0.82
COL11A1-208ENST00000470170 ANGEL1Q9UNK9 670 aaKnown RBP9.92□□□□□ -0.82
COL11A1-208ENST00000470170 CELA3AP09093 270 aa9.91□□□□□ -0.82
COL11A1-208ENST00000470170 IRAK1P51617 712 aa9.91□□□□□ -0.82
COL11A1-208ENST00000470170 CACNA2D2Q9NY47 1150 aa9.91□□□□□ -0.82
COL11A1-208ENST00000470170 ZC3H7BQ9UGR2 993 aaKnown RBP9.91□□□□□ -0.82
COL11A1-208ENST00000470170 FAM87AP0C7U9 286 aa9.9□□□□□ -0.82
COL11A1-208ENST00000470170 NFXL1Q6ZNB6 911 aa9.9□□□□□ -0.82
COL11A1-208ENST00000470170 SND1Q7KZF4 910 aaKnown RBP eCLIP9.9□□□□□ -0.82
COL11A1-208ENST00000470170 ISL2Q96A47 359 aa9.9□□□□□ -0.82
COL11A1-208ENST00000470170 SAMM50Q9Y512 469 aa9.9□□□□□ -0.82
COL11A1-208ENST00000470170 CSADQ9Y600 493 aa9.9□□□□□ -0.82
COL11A1-208ENST00000470170 PRNPP04156 253 aa9.89□□□□□ -0.83
COL11A1-208ENST00000470170 ERVK-24P63145 666 aa9.89□□□□□ -0.83
COL11A1-208ENST00000470170 VSIG10LQ86VR7 867 aa9.89□□□□□ -0.83
COL11A1-208ENST00000470170 RNF19AQ9NV58 838 aa9.89□□□□□ -0.83
COL11A1-208ENST00000470170 BSDC1Q9NW68 430 aaPredicted RBP9.89□□□□□ -0.83
COL11A1-208ENST00000470170 COL17A1Q9UMD9 1497 aaPredicted RBP9.88□□□□□ -0.83
COL11A1-208ENST00000470170 ANKRD33BA6NCL7 494 aa9.88□□□□□ -0.83
COL11A1-208ENST00000470170 PDIA4P13667 645 aaKnown RBP9.88□□□□□ -0.83
COL11A1-208ENST00000470170 PCNX4Q63HM2 1172 aa9.88□□□□□ -0.83
COL11A1-208ENST00000470170 LLGL2Q6P1M3 1020 aa9.88□□□□□ -0.83
COL11A1-208ENST00000470170 RNF214Q8ND24 703 aa9.88□□□□□ -0.83
COL11A1-208ENST00000470170 ANKRD24Q8TF21 1146 aa9.88□□□□□ -0.83
COL11A1-208ENST00000470170 SSU72Q9NP77 194 aaKnown RBP9.88□□□□□ -0.83
COL11A1-208ENST00000470170 PCOLCE2Q9UKZ9 415 aa9.88□□□□□ -0.83
COL11A1-208ENST00000470170 DCDC2CA8MYV0 355 aa9.87□□□□□ -0.83
COL11A1-208ENST00000470170 LEFTY1O75610 366 aa9.87□□□□□ -0.83
COL11A1-208ENST00000470170 TRIM37O94972 964 aa9.87□□□□□ -0.83
COL11A1-208ENST00000470170 GNA15P30679 374 aa9.87□□□□□ -0.83
COL11A1-208ENST00000470170 CYP27C1Q4G0S4 372 aa9.87□□□□□ -0.83
COL11A1-208ENST00000470170 PPM1JQ5JR12 505 aa9.87□□□□□ -0.83
COL11A1-208ENST00000470170 ABI1Q8IZP0 508 aa9.87□□□□□ -0.83
COL11A1-208ENST00000470170 TTF2Q9UNY4 1162 aaKnown RBP9.87□□□□□ -0.83
COL11A1-208ENST00000470170 PRPF40AO75400 957 aaKnown RBP9.86□□□□□ -0.83
COL11A1-208ENST00000470170 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.86□□□□□ -0.83
COL11A1-208ENST00000470170 TAL1P17542 331 aaPredicted RBP9.85□□□□□ -0.83
COL11A1-208ENST00000470170 EIF4BP23588 611 aaKnown RBP9.85□□□□□ -0.83
COL11A1-208ENST00000470170 LRRC14Q15048 493 aa9.85□□□□□ -0.83
COL11A1-208ENST00000470170 C12orf40Q86WS4 652 aa9.85□□□□□ -0.83
COL11A1-208ENST00000470170 FAM181AQ8N9Y4 354 aa9.85□□□□□ -0.83
COL11A1-208ENST00000470170 FRMD6Q96NE9 622 aa9.85□□□□□ -0.83
COL11A1-208ENST00000470170 PCDHA4Q9UN74 947 aa9.85□□□□□ -0.83
COL11A1-208ENST00000470170 NTF4P34130 210 aa9.84□□□□□ -0.83
COL11A1-208ENST00000470170 UBE3DQ7Z6J8 389 aa9.84□□□□□ -0.83
COL11A1-208ENST00000470170 TP53INP2Q8IXH6 220 aa9.84□□□□□ -0.83
COL11A1-208ENST00000470170 FLCNQ8NFG4 579 aa9.84□□□□□ -0.83
COL11A1-208ENST00000470170 DUSP9Q99956 384 aaKnown RBP9.84□□□□□ -0.83
COL11A1-208ENST00000470170 DUSP23Q9BVJ7 150 aa9.84□□□□□ -0.83
COL11A1-208ENST00000470170 PICK1Q9NRD5 415 aa9.84□□□□□ -0.83
COL11A1-208ENST00000470170 ADGRE2Q9UHX3 823 aa9.84□□□□□ -0.83
COL11A1-208ENST00000470170 U3KQE9 123 aa9.84□□□□□ -0.83
COL11A1-208ENST00000470170 EAPPQ56P03 285 aaPredicted RBP9.83□□□□□ -0.84
COL11A1-208ENST00000470170 TOP6BLQ8N6T0 577 aa9.83□□□□□ -0.84
COL11A1-208ENST00000470170 FBXL18Q96ME1 805 aa9.83□□□□□ -0.84
COL11A1-208ENST00000470170 KRTAP9-2Q9BYQ4 174 aa9.83□□□□□ -0.84
COL11A1-208ENST00000470170 CYP8B1Q9UNU6 501 aa9.83□□□□□ -0.84
COL11A1-208ENST00000470170 PTPN11Q06124 597 aaPredicted RBP9.82□□□□□ -0.84
COL11A1-208ENST00000470170 COL19A1Q14993 1142 aa9.82□□□□□ -0.84
COL11A1-208ENST00000470170 SV2BQ7L1I2 683 aa9.82□□□□□ -0.84
COL11A1-208ENST00000470170 PLD6Q8N2A8 252 aaKnown RBP9.82□□□□□ -0.84
COL11A1-208ENST00000470170 RING1Q06587 406 aa9.81□□□□□ -0.84
COL11A1-208ENST00000470170 ELMO3Q96BJ8 720 aa9.81□□□□□ -0.84
COL11A1-208ENST00000470170 PAK6Q9NQU5 681 aaPredicted RBP9.81□□□□□ -0.84
COL11A1-208ENST00000470170 AK5Q9Y6K8 562 aa9.81□□□□□ -0.84
COL11A1-208ENST00000470170 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.8□□□□□ -0.84
COL11A1-208ENST00000470170 INPP5AQ14642 412 aa9.8□□□□□ -0.84
COL11A1-208ENST00000470170 ZBTB37Q5TC79 503 aa9.8□□□□□ -0.84
COL11A1-208ENST00000470170 TTBK2Q6IQ55 1244 aa9.8□□□□□ -0.84
COL11A1-208ENST00000470170 ZNF574Q6ZN55 896 aaPredicted RBP9.8□□□□□ -0.84
COL11A1-208ENST00000470170 BCL7CQ8WUZ0 217 aaPredicted RBP9.8□□□□□ -0.84
COL11A1-208ENST00000470170 GAL3ST3Q96A11 431 aa9.8□□□□□ -0.84
COL11A1-208ENST00000470170 CCDC85BQ15834 202 aaPredicted RBP9.79□□□□□ -0.84
COL11A1-208ENST00000470170 SCARA3Q6AZY7 606 aa9.79□□□□□ -0.84
COL11A1-208ENST00000470170 LRFN4Q6PJG9 635 aa9.79□□□□□ -0.84
COL11A1-208ENST00000470170 DNAJC14Q6Y2X3 702 aaPredicted RBP9.79□□□□□ -0.84
COL11A1-208ENST00000470170 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.79□□□□□ -0.84
COL11A1-208ENST00000470170 NPAS4Q8IUM7 802 aa9.79□□□□□ -0.84
COL11A1-208ENST00000470170 NETO1Q8TDF5 533 aa9.79□□□□□ -0.84
COL11A1-208ENST00000470170 PRAMEF27A3QJZ7 478 aa9.78□□□□□ -0.84
COL11A1-208ENST00000470170 FANCGO15287 622 aa9.78□□□□□ -0.84
COL11A1-208ENST00000470170 BNIP3Q12983 259 aa9.78□□□□□ -0.84
COL11A1-208ENST00000470170 WFDC3Q8IUB2 231 aa9.78□□□□□ -0.84
COL11A1-208ENST00000470170 PARP2Q9UGN5 583 aa9.78□□□□□ -0.84
COL11A1-208ENST00000470170 SLC5A6Q9Y289 635 aa9.78□□□□□ -0.84
COL11A1-208ENST00000470170 KRTAP9-6A0A140TA67 174 aa9.77□□□□□ -0.85
COL11A1-208ENST00000470170 FGD1P98174 961 aa9.77□□□□□ -0.85
COL11A1-208ENST00000470170 ARHGAP27Q6ZUM4 889 aa9.77□□□□□ -0.85
COL11A1-208ENST00000470170 SPRED2Q7Z698 418 aa9.77□□□□□ -0.85
COL11A1-208ENST00000470170 PLPPR2Q96GM1 343 aa9.77□□□□□ -0.85
COL11A1-208ENST00000470170 PAX4O43316 350 aa9.76□□□□□ -0.85
COL11A1-208ENST00000470170 CDK8P49336 464 aa9.76□□□□□ -0.85
COL11A1-208ENST00000470170 OXCT1P55809 520 aa9.76□□□□□ -0.85
COL11A1-208ENST00000470170 MAP3K11Q16584 847 aa9.76□□□□□ -0.85
COL11A1-208ENST00000470170 MEI1Q5TIA1 1274 aa9.76□□□□□ -0.85
COL11A1-208ENST00000470170 CDC37L1Q7L3B6 337 aa9.76□□□□□ -0.85
COL11A1-208ENST00000470170 AGBL5Q8NDL9 886 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms