RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 ZFPM1Q8IX07 1006 aa17.25■□□□□ 0.35
COMMD3-208ENST00000470045 WRNIP1Q96S55 665 aa17.25■□□□□ 0.35
COMMD3-208ENST00000470045 ZNF341Q9BYN7 854 aa17.25■□□□□ 0.35
COMMD3-208ENST00000470045 CCDC8Q9H0W5 538 aaPredicted RBP17.25■□□□□ 0.35
COMMD3-208ENST00000470045 ZNF112Q9UJU3 913 aa17.25■□□□□ 0.35
COMMD3-208ENST00000470045 CSADQ9Y600 493 aa17.25■□□□□ 0.35
COMMD3-208ENST00000470045 HMMRO75330 724 aa17.24■□□□□ 0.35
COMMD3-208ENST00000470045 TBC1D8O95759 1140 aa17.24■□□□□ 0.35
COMMD3-208ENST00000470045 CYP2E1P05181 493 aaPredicted RBP17.24■□□□□ 0.35
COMMD3-208ENST00000470045 LDHCP07864 332 aa17.24■□□□□ 0.35
COMMD3-208ENST00000470045 RHPN1Q8TCX5 695 aa17.24■□□□□ 0.35
COMMD3-208ENST00000470045 ABHD8Q96I13 439 aa17.24■□□□□ 0.35
COMMD3-208ENST00000470045 MS4A4AQ96JQ5 239 aa17.24■□□□□ 0.35
COMMD3-208ENST00000470045 DDX4Q9NQI0 724 aaKnown RBP17.24■□□□□ 0.35
COMMD3-208ENST00000470045 SNRKQ9NRH2 765 aa17.24■□□□□ 0.35
COMMD3-208ENST00000470045 RAI14Q9P0K7 980 aa17.24■□□□□ 0.35
COMMD3-208ENST00000470045 DOCK1Q14185 1865 aa17.24■□□□□ 0.35
COMMD3-208ENST00000470045 ZAP70P43403 619 aa17.23■□□□□ 0.35
COMMD3-208ENST00000470045 MIGA2Q7L4E1 593 aa17.23■□□□□ 0.35
COMMD3-208ENST00000470045 SH3BP5LQ7L8J4 393 aa17.23■□□□□ 0.35
COMMD3-208ENST00000470045 ZKSCAN4Q969J2 545 aaPredicted RBP17.23■□□□□ 0.35
COMMD3-208ENST00000470045 MCOLN1Q9GZU1 580 aa17.23■□□□□ 0.35
COMMD3-208ENST00000470045 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.23■□□□□ 0.35
COMMD3-208ENST00000470045 LRP2BPQ9P2M1 347 aa17.23■□□□□ 0.35
COMMD3-208ENST00000470045 SIPA1L1O43166 1804 aa17.23■□□□□ 0.35
COMMD3-208ENST00000470045 GPR25O00155 361 aa17.22■□□□□ 0.35
COMMD3-208ENST00000470045 INPP5BP32019 993 aa17.22■□□□□ 0.35
COMMD3-208ENST00000470045 MAP3K10Q02779 954 aa17.22■□□□□ 0.35
COMMD3-208ENST00000470045 NOL9Q5SY16 702 aaKnown RBP17.22■□□□□ 0.35
COMMD3-208ENST00000470045 AACSQ86V21 672 aa17.22■□□□□ 0.35
COMMD3-208ENST00000470045 ERO1BQ86YB8 467 aa17.22■□□□□ 0.35
COMMD3-208ENST00000470045 ZNF296Q8WUU4 475 aaPredicted RBP17.22■□□□□ 0.35
COMMD3-208ENST00000470045 KIF1BPQ96EK5 621 aa17.22■□□□□ 0.35
COMMD3-208ENST00000470045 OTUD5Q96G74 571 aa17.22■□□□□ 0.35
COMMD3-208ENST00000470045 PTPN18Q99952 460 aa17.22■□□□□ 0.35
COMMD3-208ENST00000470045 R3HDMLQ9H3Y0 253 aa17.22■□□□□ 0.35
COMMD3-208ENST00000470045 DGKZQ13574 1117 aa17.21■□□□□ 0.35
COMMD3-208ENST00000470045 IL1RAPL2Q9NP60 686 aa17.21■□□□□ 0.35
COMMD3-208ENST00000470045 PIH1D3Q9NQM4 214 aaKnown RBP17.21■□□□□ 0.35
COMMD3-208ENST00000470045 PHIPQ8WWQ0 1821 aa17.21■□□□□ 0.35
COMMD3-208ENST00000470045 PTPRFP10586 1907 aa17.2■□□□□ 0.34
COMMD3-208ENST00000470045 DDTLA6NHG4 134 aaPredicted RBP17.2■□□□□ 0.34
COMMD3-208ENST00000470045 RAB11FIP3O75154 756 aa17.2■□□□□ 0.34
COMMD3-208ENST00000470045 GTF2A2P52657 109 aa17.2■□□□□ 0.34
COMMD3-208ENST00000470045 PPIL2Q13356 520 aa17.2■□□□□ 0.34
COMMD3-208ENST00000470045 NAA16Q6N069 864 aaPredicted RBP17.2■□□□□ 0.34
COMMD3-208ENST00000470045 BRI3BPQ8WY22 251 aa17.2■□□□□ 0.34
COMMD3-208ENST00000470045 ATAD5Q96QE3 1844 aa17.19■□□□□ 0.34
COMMD3-208ENST00000470045 PHF20L1A8MW92 1017 aa17.19■□□□□ 0.34
COMMD3-208ENST00000470045 PPP4CP60510 307 aa17.19■□□□□ 0.34
COMMD3-208ENST00000470045 PPATQ06203 517 aa17.19■□□□□ 0.34
COMMD3-208ENST00000470045 PICALMQ13492 652 aa17.19■□□□□ 0.34
COMMD3-208ENST00000470045 OTUD7BQ6GQQ9 843 aa17.19■□□□□ 0.34
COMMD3-208ENST00000470045 CTU1Q7Z7A3 348 aaKnown RBP17.19■□□□□ 0.34
COMMD3-208ENST00000470045 ADGRA1Q86SQ6 560 aa17.19■□□□□ 0.34
COMMD3-208ENST00000470045 CLASRPQ8N2M8 674 aaKnown RBP17.19■□□□□ 0.34
COMMD3-208ENST00000470045 CCL15-CCL14A0A0B4J2E2 113 aa17.18■□□□□ 0.34
COMMD3-208ENST00000470045 IRF6O14896 467 aa17.18■□□□□ 0.34
COMMD3-208ENST00000470045 CCL15Q16663 113 aa17.18■□□□□ 0.34
COMMD3-208ENST00000470045 OSBPL5Q9H0X9 879 aaPredicted RBP17.18■□□□□ 0.34
COMMD3-208ENST00000470045 TBC1D12O60347 775 aa17.17■□□□□ 0.34
COMMD3-208ENST00000470045 FKTNO75072 461 aa17.17■□□□□ 0.34
COMMD3-208ENST00000470045 PLCG2P16885 1265 aa17.17■□□□□ 0.34
COMMD3-208ENST00000470045 CRHR2Q13324 411 aa17.17■□□□□ 0.34
COMMD3-208ENST00000470045 SNAPC2Q13487 334 aa17.17■□□□□ 0.34
COMMD3-208ENST00000470045 DDX60LQ5H9U9 1706 aaKnown RBP17.17■□□□□ 0.34
COMMD3-208ENST00000470045 TMED8Q6PL24 325 aaPredicted RBP17.17■□□□□ 0.34
COMMD3-208ENST00000470045 ZSCAN29Q8IWY8 852 aaPredicted RBP17.17■□□□□ 0.34
COMMD3-208ENST00000470045 TEX11Q8IYF3 940 aa17.17■□□□□ 0.34
COMMD3-208ENST00000470045 SH3RF3Q8TEJ3 882 aaPredicted RBP17.17■□□□□ 0.34
COMMD3-208ENST00000470045 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.17■□□□□ 0.34
COMMD3-208ENST00000470045 ZCCHC17Q9NP64 241 aaKnown RBP17.17■□□□□ 0.34
COMMD3-208ENST00000470045 KCNH4Q9UQ05 1017 aa17.17■□□□□ 0.34
COMMD3-208ENST00000470045 BAG3O95817 575 aa17.16■□□□□ 0.34
COMMD3-208ENST00000470045 CETPP11597 493 aa17.16■□□□□ 0.34
COMMD3-208ENST00000470045 SCYL3Q8IZE3 742 aa17.16■□□□□ 0.34
COMMD3-208ENST00000470045 FAM43AQ8N2R8 423 aa17.16■□□□□ 0.34
COMMD3-208ENST00000470045 NOL10Q9BSC4 688 aaKnown RBP17.16■□□□□ 0.34
COMMD3-208ENST00000470045 ANTXR1Q9H6X2 564 aa17.16■□□□□ 0.34
COMMD3-208ENST00000470045 AATFQ9NY61 560 aaKnown RBP eCLIP17.16■□□□□ 0.34
COMMD3-208ENST00000470045 NDUFB9Q9Y6M9 179 aa17.16■□□□□ 0.34
COMMD3-208ENST00000470045 MYH1P12882 1939 aa17.15■□□□□ 0.34
COMMD3-208ENST00000470045 APBB1O00213 710 aa17.15■□□□□ 0.34
COMMD3-208ENST00000470045 IDH1O75874 414 aaKnown RBP17.15■□□□□ 0.34
COMMD3-208ENST00000470045 SLURP2P0DP57 97 aa17.15■□□□□ 0.34
COMMD3-208ENST00000470045 MYH7P12883 1935 aa17.15■□□□□ 0.34
COMMD3-208ENST00000470045 CTNND1O60716 968 aaKnown RBP17.14■□□□□ 0.33
COMMD3-208ENST00000470045 IFIT2P09913 472 aaKnown RBP17.14■□□□□ 0.33
COMMD3-208ENST00000470045 RRP1P56182 461 aaKnown RBP17.14■□□□□ 0.33
COMMD3-208ENST00000470045 PKN2Q16513 984 aaKnown RBP17.14■□□□□ 0.33
COMMD3-208ENST00000470045 FLT1P17948 1338 aa17.14■□□□□ 0.33
COMMD3-208ENST00000470045 BTBD19C9JJ37 291 aa17.13■□□□□ 0.33
COMMD3-208ENST00000470045 CYP7A1P22680 504 aa17.13■□□□□ 0.33
COMMD3-208ENST00000470045 MAP3K12Q12852 859 aa17.13■□□□□ 0.33
COMMD3-208ENST00000470045 MOGSQ13724 837 aa17.13■□□□□ 0.33
COMMD3-208ENST00000470045 TTF1Q15361 905 aaPredicted RBP17.13■□□□□ 0.33
COMMD3-208ENST00000470045 TAF1CQ15572 869 aaPredicted RBP17.13■□□□□ 0.33
COMMD3-208ENST00000470045 CERS3Q8IU89 383 aa17.13■□□□□ 0.33
COMMD3-208ENST00000470045 DHX36Q9H2U1 1008 aaKnown RBP17.13■□□□□ 0.33
COMMD3-208ENST00000470045 LOC285556D6RIA3 1793 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms