RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 IFNAR1P17181 557 aa15.76■□□□□ 0.11
BRCA1-209ENST00000470026 CBX1P83916 185 aa15.76■□□□□ 0.11
BRCA1-209ENST00000470026 DMTNQ08495 405 aa15.76■□□□□ 0.11
BRCA1-209ENST00000470026 MICU3Q86XE3 530 aa15.76■□□□□ 0.11
BRCA1-209ENST00000470026 AIDAQ96BJ3 306 aa15.76■□□□□ 0.11
BRCA1-209ENST00000470026 L2HGDHQ9H9P8 463 aa15.76■□□□□ 0.11
BRCA1-209ENST00000470026 ZBTB1Q9Y2K1 713 aa15.76■□□□□ 0.11
BRCA1-209ENST00000470026 RXRAP19793 462 aa15.76■□□□□ 0.11
BRCA1-209ENST00000470026 SFPQP23246 707 aaKnown RBP eCLIP15.76■□□□□ 0.11
BRCA1-209ENST00000470026 IL6STP40189 918 aaPredicted RBP15.76■□□□□ 0.11
BRCA1-209ENST00000470026 NAA30Q147X3 362 aaPredicted RBP15.76■□□□□ 0.11
BRCA1-209ENST00000470026 TMEM67Q5HYA8 995 aa15.76■□□□□ 0.11
BRCA1-209ENST00000470026 SPATA5Q8NB90 893 aa15.76■□□□□ 0.11
BRCA1-209ENST00000470026 ZNF592Q92610 1267 aa15.76■□□□□ 0.11
BRCA1-209ENST00000470026 ERO1AQ96HE7 468 aa15.76■□□□□ 0.11
BRCA1-209ENST00000470026 PPP1R13BQ96KQ4 1090 aa15.76■□□□□ 0.11
BRCA1-209ENST00000470026 CNNM2Q9H8M5 875 aa15.76■□□□□ 0.11
BRCA1-209ENST00000470026 TRMT1Q9NXH9 659 aaKnown RBP15.76■□□□□ 0.11
BRCA1-209ENST00000470026 ZSWIM5Q9P217 1185 aa15.76■□□□□ 0.11
BRCA1-209ENST00000470026 MYL5Q02045 173 aa15.75■□□□□ 0.11
BRCA1-209ENST00000470026 METTL16Q86W50 562 aaKnown RBP15.75■□□□□ 0.11
BRCA1-209ENST00000470026 TMX1Q9H3N1 280 aa15.75■□□□□ 0.11
BRCA1-209ENST00000470026 OGFRQ9NZT2 677 aa15.75■□□□□ 0.11
BRCA1-209ENST00000470026 ZNF215Q9UL58 517 aaPredicted RBP15.75■□□□□ 0.11
BRCA1-209ENST00000470026 PLCH1Q4KWH8 1693 aa15.75■□□□□ 0.11
BRCA1-209ENST00000470026 PNPLA7Q6ZV29 1317 aa15.74■□□□□ 0.11
BRCA1-209ENST00000470026 GSG1L2A8MUP6 293 aa15.74■□□□□ 0.11
BRCA1-209ENST00000470026 RCAN1P53805 252 aa15.74■□□□□ 0.11
BRCA1-209ENST00000470026 MDM2Q00987 491 aaPredicted RBP15.74■□□□□ 0.11
BRCA1-209ENST00000470026 TRIM29Q14134 588 aa15.74■□□□□ 0.11
BRCA1-209ENST00000470026 AKNAD1Q5T1N1 836 aa15.74■□□□□ 0.11
BRCA1-209ENST00000470026 KRBA2Q6ZNG9 492 aa15.74■□□□□ 0.11
BRCA1-209ENST00000470026 WASF1Q92558 559 aa15.74■□□□□ 0.11
BRCA1-209ENST00000470026 PKNOX2Q96KN3 472 aa15.74■□□□□ 0.11
BRCA1-209ENST00000470026 ATP1A3P13637 1013 aa15.74■□□□□ 0.11
BRCA1-209ENST00000470026 LMOD1P29536 600 aaPredicted RBP15.74■□□□□ 0.11
BRCA1-209ENST00000470026 SSRP1Q08945 709 aaKnown RBP15.74■□□□□ 0.11
BRCA1-209ENST00000470026 MAP3K12Q12852 859 aa15.74■□□□□ 0.11
BRCA1-209ENST00000470026 RASGRF1Q13972 1273 aa15.74■□□□□ 0.11
BRCA1-209ENST00000470026 FOXP4Q8IVH2 680 aaPredicted RBP15.74■□□□□ 0.11
BRCA1-209ENST00000470026 STAG1Q8WVM7 1258 aa15.74■□□□□ 0.11
BRCA1-209ENST00000470026 GTPBP4Q9BZE4 634 aaKnown RBP15.74■□□□□ 0.11
BRCA1-209ENST00000470026 KRT23Q9C075 422 aa15.74■□□□□ 0.11
BRCA1-209ENST00000470026 DDX41Q9UJV9 622 aaKnown RBP15.74■□□□□ 0.11
BRCA1-209ENST00000470026 SLC12A7Q9Y666 1083 aa15.74■□□□□ 0.11
BRCA1-209ENST00000470026 MBD4O95243 580 aa15.73■□□□□ 0.11
BRCA1-209ENST00000470026 SLC5A1P13866 664 aa15.73■□□□□ 0.11
BRCA1-209ENST00000470026 PNOCQ13519 176 aa15.73■□□□□ 0.11
BRCA1-209ENST00000470026 LONRF3Q496Y0 759 aa15.73■□□□□ 0.11
BRCA1-209ENST00000470026 CCDC93Q567U6 631 aa15.73■□□□□ 0.11
BRCA1-209ENST00000470026 NFXL1Q6ZNB6 911 aa15.73■□□□□ 0.11
BRCA1-209ENST00000470026 NOSTRINQ8IVI9 506 aa15.73■□□□□ 0.11
BRCA1-209ENST00000470026 CLIC6Q96NY7 704 aa15.73■□□□□ 0.11
BRCA1-209ENST00000470026 NAPBQ9H115 298 aa15.73■□□□□ 0.11
BRCA1-209ENST00000470026 INCENPQ9NQS7 918 aa15.73■□□□□ 0.11
BRCA1-209ENST00000470026 KCNH3Q9ULD8 1083 aa15.73■□□□□ 0.11
BRCA1-209ENST00000470026 MORC2Q9Y6X9 1032 aaPredicted RBP15.73■□□□□ 0.11
BRCA1-209ENST00000470026 IFIT3O14879 490 aaKnown RBP15.73■□□□□ 0.11
BRCA1-209ENST00000470026 CBFA2T2O43439 604 aa15.73■□□□□ 0.11
BRCA1-209ENST00000470026 SLU7O95391 586 aaKnown RBP15.73■□□□□ 0.11
BRCA1-209ENST00000470026 MMP1P03956 469 aa15.73■□□□□ 0.11
BRCA1-209ENST00000470026 GNAT2P19087 354 aa15.73■□□□□ 0.11
BRCA1-209ENST00000470026 TOB1P50616 345 aaPredicted RBP15.73■□□□□ 0.11
BRCA1-209ENST00000470026 NT5DC1Q5TFE4 455 aa15.73■□□□□ 0.11
BRCA1-209ENST00000470026 DZIP3Q86Y13 1208 aaKnown RBP15.73■□□□□ 0.11
BRCA1-209ENST00000470026 STK11IPQ8N1F8 1099 aa15.73■□□□□ 0.11
BRCA1-209ENST00000470026 MAGEB6Q8N7X4 407 aa15.73■□□□□ 0.11
BRCA1-209ENST00000470026 KRI1Q8N9T8 703 aaKnown RBP15.73■□□□□ 0.11
BRCA1-209ENST00000470026 MYL10Q9BUA6 226 aa15.73■□□□□ 0.11
BRCA1-209ENST00000470026 GNL2Q13823 731 aaKnown RBP15.72■□□□□ 0.11
BRCA1-209ENST00000470026 ZNF397Q8NF99 534 aaPredicted RBP15.72■□□□□ 0.11
BRCA1-209ENST00000470026 DPF2Q92785 391 aa15.72■□□□□ 0.11
BRCA1-209ENST00000470026 SLC26A6Q9BXS9 759 aa15.72■□□□□ 0.11
BRCA1-209ENST00000470026 FOXP1Q9H334 677 aaPredicted RBP15.72■□□□□ 0.11
BRCA1-209ENST00000470026 PRDM10Q9NQV6 1147 aa15.72■□□□□ 0.11
BRCA1-209ENST00000470026 RTL9Q8NET4 1388 aa15.72■□□□□ 0.11
BRCA1-209ENST00000470026 SPDYE4A6NLX3 237 aa15.71■□□□□ 0.11
BRCA1-209ENST00000470026 UBE2Q2LH0YL09 131 aa15.71■□□□□ 0.11
BRCA1-209ENST00000470026 NRDCO43847 1150 aa15.71■□□□□ 0.11
BRCA1-209ENST00000470026 PTPREP23469 700 aa15.71■□□□□ 0.11
BRCA1-209ENST00000470026 HSPA2P54652 639 aa15.71■□□□□ 0.11
BRCA1-209ENST00000470026 UBASH3AP57075 661 aa15.71■□□□□ 0.11
BRCA1-209ENST00000470026 CTDSPL2Q05D32 466 aa15.71■□□□□ 0.11
BRCA1-209ENST00000470026 VSTM4Q8IW00 320 aa15.71■□□□□ 0.11
BRCA1-209ENST00000470026 ZNF579Q8NAF0 562 aaKnown RBP15.71■□□□□ 0.11
BRCA1-209ENST00000470026 PCDHA5Q9Y5H7 936 aa15.71■□□□□ 0.11
BRCA1-209ENST00000470026 COL22A1Q8NFW1 1626 aaPredicted RBP15.71■□□□□ 0.11
BRCA1-209ENST00000470026 STRCQ7RTU9 1775 aa15.71■□□□□ 0.11
BRCA1-209ENST00000470026 BMP6P22004 513 aa15.71■□□□□ 0.11
BRCA1-209ENST00000470026 HELBQ8NG08 1087 aaPredicted RBP15.71■□□□□ 0.11
BRCA1-209ENST00000470026 ARMT1Q9H993 441 aa15.71■□□□□ 0.11
BRCA1-209ENST00000470026 FAM53CQ9NYF3 392 aa15.71■□□□□ 0.11
BRCA1-209ENST00000470026 FBXO2Q9UK22 296 aaPredicted RBP15.71■□□□□ 0.11
BRCA1-209ENST00000470026 RREB1Q92766 1687 aa15.71■□□□□ 0.1
BRCA1-209ENST00000470026 LAMB2P55268 1798 aa15.71■□□□□ 0.1
BRCA1-209ENST00000470026 BTBD18B2RXH4 712 aa15.7■□□□□ 0.1
BRCA1-209ENST00000470026 CCP110O43303 1012 aa15.7■□□□□ 0.1
BRCA1-209ENST00000470026 GUCY1A2P33402 732 aa15.7■□□□□ 0.1
BRCA1-209ENST00000470026 SARSP49591 514 aaKnown RBP15.7■□□□□ 0.1
BRCA1-209ENST00000470026 EIF5P55010 431 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms