RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 ZNF202O95125 648 aa17.04■□□□□ 0.32
CBWD3-205ENST00000469687 PFKFB1P16118 471 aa17.04■□□□□ 0.32
CBWD3-205ENST00000469687 LIFRP42702 1097 aa17.04■□□□□ 0.32
CBWD3-205ENST00000469687 CACTINQ8WUQ7 758 aaKnown RBP17.04■□□□□ 0.32
CBWD3-205ENST00000469687 SDR42E1Q8WUS8 393 aa17.04■□□□□ 0.32
CBWD3-205ENST00000469687 TSC1Q92574 1164 aa17.04■□□□□ 0.32
CBWD3-205ENST00000469687 SLC26A6Q9BXS9 759 aa17.04■□□□□ 0.32
CBWD3-205ENST00000469687 KIAA1468Q9P260 1216 aa17.04■□□□□ 0.32
CBWD3-205ENST00000469687 ABCF2Q9UG63 623 aa17.04■□□□□ 0.32
CBWD3-205ENST00000469687 BAZ2AQ9UIF9 1905 aaKnown RBP17.03■□□□□ 0.32
CBWD3-205ENST00000469687 CICQ96RK0 1608 aaPredicted RBP17.03■□□□□ 0.32
CBWD3-205ENST00000469687 PNPLA7Q6ZV29 1317 aa17.03■□□□□ 0.32
CBWD3-205ENST00000469687 BIN1O00499 593 aa17.03■□□□□ 0.32
CBWD3-205ENST00000469687 ARID5BQ14865 1188 aa17.03■□□□□ 0.32
CBWD3-205ENST00000469687 SLC39A14Q15043 492 aa17.03■□□□□ 0.32
CBWD3-205ENST00000469687 SARM1Q6SZW1 724 aa17.03■□□□□ 0.32
CBWD3-205ENST00000469687 CMTR1Q8N1G2 835 aaKnown RBP17.03■□□□□ 0.32
CBWD3-205ENST00000469687 LINC00116Q8NCU8 138 aa17.03■□□□□ 0.32
CBWD3-205ENST00000469687 CCDC69A6NI79 296 aa17.02■□□□□ 0.32
CBWD3-205ENST00000469687 CPLX2Q6PUV4 134 aaKnown RBP17.02■□□□□ 0.32
CBWD3-205ENST00000469687 MYRIPQ8NFW9 859 aa17.02■□□□□ 0.32
CBWD3-205ENST00000469687 STAG1Q8WVM7 1258 aa17.02■□□□□ 0.32
CBWD3-205ENST00000469687 MYH2Q9UKX2 1941 aa17.02■□□□□ 0.32
CBWD3-205ENST00000469687 CYP7A1P22680 504 aa17.02■□□□□ 0.31
CBWD3-205ENST00000469687 PTPAQ15257 358 aa17.02■□□□□ 0.31
CBWD3-205ENST00000469687 BICDL1Q6ZP65 573 aa17.02■□□□□ 0.31
CBWD3-205ENST00000469687 CEP57L1Q8IYX8 460 aa17.02■□□□□ 0.31
CBWD3-205ENST00000469687 CCDC82Q8N4S0 544 aa17.02■□□□□ 0.31
CBWD3-205ENST00000469687 MAP3K14Q99558 947 aa17.02■□□□□ 0.31
CBWD3-205ENST00000469687 CMA1P23946 247 aa17.01■□□□□ 0.31
CBWD3-205ENST00000469687 GNL2Q13823 731 aaKnown RBP17.01■□□□□ 0.31
CBWD3-205ENST00000469687 PTF1AQ7RTS3 328 aa17.01■□□□□ 0.31
CBWD3-205ENST00000469687 CLIC6Q96NY7 704 aa17.01■□□□□ 0.31
CBWD3-205ENST00000469687 KRT23Q9C075 422 aa17.01■□□□□ 0.31
CBWD3-205ENST00000469687 CNNM2Q9H8M5 875 aa17.01■□□□□ 0.31
CBWD3-205ENST00000469687 CACNA1SQ13698 1873 aa17.01■□□□□ 0.31
CBWD3-205ENST00000469687 DYNC1I1O14576 645 aa17.01■□□□□ 0.31
CBWD3-205ENST00000469687 CDC25BP30305 580 aa17.01■□□□□ 0.31
CBWD3-205ENST00000469687 SHC4Q6S5L8 630 aa17.01■□□□□ 0.31
CBWD3-205ENST00000469687 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.01■□□□□ 0.31
CBWD3-205ENST00000469687 NACAP1Q9BZK3 213 aa17.01■□□□□ 0.31
CBWD3-205ENST00000469687 MINDY4BA8MYZ0 360 aa17■□□□□ 0.31
CBWD3-205ENST00000469687 FMNL1O95466 1100 aaPredicted RBP17■□□□□ 0.31
CBWD3-205ENST00000469687 SLC3A2P08195 630 aaKnown RBP17■□□□□ 0.31
CBWD3-205ENST00000469687 GNAT2P19087 354 aa17■□□□□ 0.31
CBWD3-205ENST00000469687 U2AF2P26368 475 aaKnown RBP eCLIP17■□□□□ 0.31
CBWD3-205ENST00000469687 SSRP1Q08945 709 aaKnown RBP17■□□□□ 0.31
CBWD3-205ENST00000469687 ISM2Q6H9L7 571 aa17■□□□□ 0.31
CBWD3-205ENST00000469687 MRFAP1L1Q96HT8 127 aa17■□□□□ 0.31
CBWD3-205ENST00000469687 CDC5LQ99459 802 aaKnown RBP17■□□□□ 0.31
CBWD3-205ENST00000469687 RAI14Q9P0K7 980 aa17■□□□□ 0.31
CBWD3-205ENST00000469687 MYH6P13533 1939 aa17■□□□□ 0.31
CBWD3-205ENST00000469687 ZNF804BA4D1E1 1349 aa17■□□□□ 0.31
CBWD3-205ENST00000469687 PPARAQ07869 468 aa16.99■□□□□ 0.31
CBWD3-205ENST00000469687 WTAPQ15007 396 aa16.99■□□□□ 0.31
CBWD3-205ENST00000469687 PRIMPOLQ96LW4 560 aa16.99■□□□□ 0.31
CBWD3-205ENST00000469687 KCNJ14Q9UNX9 436 aa16.99■□□□□ 0.31
CBWD3-205ENST00000469687 ZNF652Q9Y2D9 606 aa16.99■□□□□ 0.31
CBWD3-205ENST00000469687 TRIM29Q14134 588 aa16.99■□□□□ 0.31
CBWD3-205ENST00000469687 FAM98CQ17RN3 349 aaKnown RBP16.99■□□□□ 0.31
CBWD3-205ENST00000469687 ANKRD18AQ8IVF6 992 aa16.99■□□□□ 0.31
CBWD3-205ENST00000469687 CELF1Q92879 486 aaKnown RBP16.99■□□□□ 0.31
CBWD3-205ENST00000469687 STK36Q9NRP7 1315 aa16.98■□□□□ 0.31
CBWD3-205ENST00000469687 BTBD18B2RXH4 712 aa16.98■□□□□ 0.31
CBWD3-205ENST00000469687 IFNAR1P17181 557 aa16.98■□□□□ 0.31
CBWD3-205ENST00000469687 KLRK1P26718 216 aa16.98■□□□□ 0.31
CBWD3-205ENST00000469687 RTN1Q16799 776 aa16.98■□□□□ 0.31
CBWD3-205ENST00000469687 BARGINQ6ZT62 677 aa16.98■□□□□ 0.31
CBWD3-205ENST00000469687 RGS22Q8NE09 1264 aa16.98■□□□□ 0.31
CBWD3-205ENST00000469687 ZNF384Q8TF68 577 aa16.98■□□□□ 0.31
CBWD3-205ENST00000469687 HPSEQ9Y251 543 aa16.98■□□□□ 0.31
CBWD3-205ENST00000469687 CYP2D7A0A087X1C5 515 aa16.98■□□□□ 0.31
CBWD3-205ENST00000469687 SYKP43405 635 aa16.98■□□□□ 0.31
CBWD3-205ENST00000469687 DYNLL1P63167 89 aaKnown RBP16.98■□□□□ 0.31
CBWD3-205ENST00000469687 TBC1D9BQ66K14 1250 aa16.98■□□□□ 0.31
CBWD3-205ENST00000469687 FILIP1Q7Z7B0 1213 aa16.98■□□□□ 0.31
CBWD3-205ENST00000469687 NBPF11Q86T75 865 aa16.98■□□□□ 0.31
CBWD3-205ENST00000469687 NUP133Q8WUM0 1156 aa16.98■□□□□ 0.31
CBWD3-205ENST00000469687 NAT10Q9H0A0 1025 aaKnown RBP16.98■□□□□ 0.31
CBWD3-205ENST00000469687 MINPP1Q9UNW1 487 aa16.98■□□□□ 0.31
CBWD3-205ENST00000469687 SCN7AQ01118 1682 aa16.97■□□□□ 0.31
CBWD3-205ENST00000469687 MAGEB6P1A0A0J9YX57 407 aa16.97■□□□□ 0.31
CBWD3-205ENST00000469687 PPP6R2O75170 966 aa16.97■□□□□ 0.31
CBWD3-205ENST00000469687 CLEC4GQ6UXB4 293 aa16.97■□□□□ 0.31
CBWD3-205ENST00000469687 LRRC8AQ8IWT6 810 aa16.97■□□□□ 0.31
CBWD3-205ENST00000469687 CCDC24Q8N4L8 307 aa16.97■□□□□ 0.31
CBWD3-205ENST00000469687 SMARCC1Q92922 1105 aaPredicted RBP16.97■□□□□ 0.31
CBWD3-205ENST00000469687 C16orf45Q96MC5 204 aaPredicted RBP16.97■□□□□ 0.31
CBWD3-205ENST00000469687 RIOK1Q9BRS2 568 aaKnown RBP16.97■□□□□ 0.31
CBWD3-205ENST00000469687 NID2Q14112 1375 aa16.97■□□□□ 0.31
CBWD3-205ENST00000469687 EVX2Q03828 476 aa16.96■□□□□ 0.31
CBWD3-205ENST00000469687 SF3B3Q15393 1217 aaKnown RBP16.96■□□□□ 0.31
CBWD3-205ENST00000469687 SPECC1Q5M775 1068 aa16.96■□□□□ 0.31
CBWD3-205ENST00000469687 BCL2L12Q9HB09 334 aa16.96■□□□□ 0.31
CBWD3-205ENST00000469687 MYH13Q9UKX3 1938 aa16.96■□□□□ 0.31
CBWD3-205ENST00000469687 MMP1P03956 469 aa16.96■□□□□ 0.31
CBWD3-205ENST00000469687 TOB1P50616 345 aaPredicted RBP16.96■□□□□ 0.31
CBWD3-205ENST00000469687 NLRP12P59046 1061 aa16.96■□□□□ 0.31
CBWD3-205ENST00000469687 GRIN1Q05586 938 aa16.96■□□□□ 0.31
CBWD3-205ENST00000469687 PNOCQ13519 176 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms