RNA–Protein interactions for RNA: ENST00000469498.1

GAPVD1-213, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 385 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-213ENST00000469498 ZSCAN25Q6NSZ9 544 aa10.12□□□□□ -0.79
GAPVD1-213ENST00000469498 RSBN1LQ6PCB5 846 aaPredicted RBP10.12□□□□□ -0.79
GAPVD1-213ENST00000469498 ZNF384Q8TF68 577 aa10.12□□□□□ -0.79
GAPVD1-213ENST00000469498 FAM227BQ96M60 508 aa10.12□□□□□ -0.79
GAPVD1-213ENST00000469498 TTF2Q9UNY4 1162 aaKnown RBP10.12□□□□□ -0.79
GAPVD1-213ENST00000469498 ATAD5Q96QE3 1844 aa10.12□□□□□ -0.79
GAPVD1-213ENST00000469498 MAST3O60307 1309 aa10.11□□□□□ -0.79
GAPVD1-213ENST00000469498 TCRBV5S4A2TA0A5A2 114 aa10.11□□□□□ -0.79
GAPVD1-213ENST00000469498 M0R2C6 588 aa10.11□□□□□ -0.79
GAPVD1-213ENST00000469498 HIP1O00291 1037 aa10.11□□□□□ -0.79
GAPVD1-213ENST00000469498 VIL1P09327 827 aaKnown RBP10.11□□□□□ -0.79
GAPVD1-213ENST00000469498 FKBP1AP62942 108 aaKnown RBP10.11□□□□□ -0.79
GAPVD1-213ENST00000469498 LRRFIP1Q32MZ4 808 aaKnown RBP10.11□□□□□ -0.79
GAPVD1-213ENST00000469498 C8orf34Q49A92 452 aa10.11□□□□□ -0.79
GAPVD1-213ENST00000469498 ARSIQ5FYB1 569 aa10.11□□□□□ -0.79
GAPVD1-213ENST00000469498 CASC1Q6TDU7 716 aa10.11□□□□□ -0.79
GAPVD1-213ENST00000469498 CWC27Q6UX04 472 aaKnown RBP10.11□□□□□ -0.79
GAPVD1-213ENST00000469498 ADGRA1Q86SQ6 560 aa10.11□□□□□ -0.79
GAPVD1-213ENST00000469498 NSUN4Q96CB9 384 aaKnown RBP10.11□□□□□ -0.79
GAPVD1-213ENST00000469498 GOLGB1Q14789 3259 aaKnown RBP10.11□□□□□ -0.79
GAPVD1-213ENST00000469498 MROH7-TTC4A0A0A0MT08 1334 aa10.1□□□□□ -0.79
GAPVD1-213ENST00000469498 SHTN1A0MZ66 631 aa10.1□□□□□ -0.79
GAPVD1-213ENST00000469498 ZFYP08048 801 aaPredicted RBP10.1□□□□□ -0.79
GAPVD1-213ENST00000469498 GMPSP49915 693 aaPredicted RBP10.1□□□□□ -0.79
GAPVD1-213ENST00000469498 GSTO1P78417 241 aa10.1□□□□□ -0.79
GAPVD1-213ENST00000469498 ZMYM1Q5SVZ6 1142 aa10.1□□□□□ -0.79
GAPVD1-213ENST00000469498 CCDC129Q6ZRS4 1044 aa10.1□□□□□ -0.79
GAPVD1-213ENST00000469498 MIGA1Q8NAN2 632 aa10.1□□□□□ -0.79
GAPVD1-213ENST00000469498 APPBP2Q92624 585 aa10.1□□□□□ -0.79
GAPVD1-213ENST00000469498 SEC62Q99442 399 aaKnown RBP10.1□□□□□ -0.79
GAPVD1-213ENST00000469498 GMLQ99445 158 aa10.1□□□□□ -0.79
GAPVD1-213ENST00000469498 IL25Q9H293 177 aa10.1□□□□□ -0.79
GAPVD1-213ENST00000469498 SUGT1Q9Y2Z0 365 aa10.1□□□□□ -0.79
GAPVD1-213ENST00000469498 RAD50Q92878 1312 aa10.09□□□□□ -0.79
GAPVD1-213ENST00000469498 DDNO94850 711 aaPredicted RBP10.09□□□□□ -0.79
GAPVD1-213ENST00000469498 MBD4O95243 580 aa10.09□□□□□ -0.79
GAPVD1-213ENST00000469498 CRKP46108 304 aa10.09□□□□□ -0.79
GAPVD1-213ENST00000469498 RBM5P52756 815 aaKnown RBP eCLIP10.09□□□□□ -0.79
GAPVD1-213ENST00000469498 DYNLL1P63167 89 aaKnown RBP10.09□□□□□ -0.79
GAPVD1-213ENST00000469498 UBE3CQ15386 1083 aa10.09□□□□□ -0.79
GAPVD1-213ENST00000469498 ZNF589Q86UQ0 364 aaPredicted RBP10.09□□□□□ -0.79
GAPVD1-213ENST00000469498 GPC2Q8N158 579 aa10.09□□□□□ -0.79
GAPVD1-213ENST00000469498 AGBL3Q8NEM8 1001 aa10.09□□□□□ -0.79
GAPVD1-213ENST00000469498 RUFY2Q8WXA3 655 aa10.09□□□□□ -0.79
GAPVD1-213ENST00000469498 OSBP2Q969R2 916 aa10.09□□□□□ -0.79
GAPVD1-213ENST00000469498 TEKT1Q969V4 418 aa10.09□□□□□ -0.79
GAPVD1-213ENST00000469498 ESYT1Q9BSJ8 1104 aa10.09□□□□□ -0.79
GAPVD1-213ENST00000469498 PUS7LQ9H0K6 701 aaKnown RBP10.09□□□□□ -0.79
GAPVD1-213ENST00000469498 EMILIN3Q9NT22 766 aa10.09□□□□□ -0.79
GAPVD1-213ENST00000469498 DAGLAQ9Y4D2 1042 aa10.09□□□□□ -0.79
GAPVD1-213ENST00000469498 ARIH1Q9Y4X5 557 aaPredicted RBP10.09□□□□□ -0.79
GAPVD1-213ENST00000469498 PCDHAC2Q9Y5I4 1007 aa10.09□□□□□ -0.79
GAPVD1-213ENST00000469498 GAKO14976 1311 aa10.08□□□□□ -0.8
GAPVD1-213ENST00000469498 CCDC171Q6TFL3 1326 aa10.08□□□□□ -0.8
GAPVD1-213ENST00000469498 ZC3H4Q9UPT8 1303 aaKnown RBP10.08□□□□□ -0.8
GAPVD1-213ENST00000469498 MAGEB6P1A0A0J9YX57 407 aa10.08□□□□□ -0.8
GAPVD1-213ENST00000469498 GPAA1O43292 621 aa10.08□□□□□ -0.8
GAPVD1-213ENST00000469498 LDHCP07864 332 aa10.08□□□□□ -0.8
GAPVD1-213ENST00000469498 USP17L8P0C7I0 530 aa10.08□□□□□ -0.8
GAPVD1-213ENST00000469498 RPS12P25398 132 aaKnown RBP10.08□□□□□ -0.8
GAPVD1-213ENST00000469498 BTDP43251 543 aa10.08□□□□□ -0.8
GAPVD1-213ENST00000469498 CFAP100Q494V2 611 aa10.08□□□□□ -0.8
GAPVD1-213ENST00000469498 MCMDC2Q4G0Z9 681 aa10.08□□□□□ -0.8
GAPVD1-213ENST00000469498 SLF2Q8IX21 1173 aa10.08□□□□□ -0.8
GAPVD1-213ENST00000469498 LCORLQ8N3X6 602 aa10.08□□□□□ -0.8
GAPVD1-213ENST00000469498 AIDAQ96BJ3 306 aa10.08□□□□□ -0.8
GAPVD1-213ENST00000469498 NOL10Q9BSC4 688 aaKnown RBP10.08□□□□□ -0.8
GAPVD1-213ENST00000469498 ARMT1Q9H993 441 aa10.08□□□□□ -0.8
GAPVD1-213ENST00000469498 HELLSQ9NRZ9 838 aa10.08□□□□□ -0.8
GAPVD1-213ENST00000469498 AATFQ9NY61 560 aaKnown RBP eCLIP10.08□□□□□ -0.8
GAPVD1-213ENST00000469498 HDAC9Q9UKV0 1011 aa10.08□□□□□ -0.8
GAPVD1-213ENST00000469498 OTOFQ9HC10 1997 aa10.08□□□□□ -0.8
GAPVD1-213ENST00000469498 TRPM7Q96QT4 1865 aa10.07□□□□□ -0.8
GAPVD1-213ENST00000469498 SGSM2O43147 1006 aa10.07□□□□□ -0.8
GAPVD1-213ENST00000469498 MFAP1P55081 439 aaKnown RBP10.07□□□□□ -0.8
GAPVD1-213ENST00000469498 OGFOD1Q8N543 542 aa10.07□□□□□ -0.8
GAPVD1-213ENST00000469498 MYH4Q9Y623 1939 aa10.07□□□□□ -0.8
GAPVD1-213ENST00000469498 IGSF3O75054 1194 aa10.06□□□□□ -0.8
GAPVD1-213ENST00000469498 EGFRP00533 1210 aa10.06□□□□□ -0.8
GAPVD1-213ENST00000469498 LMOD1P29536 600 aaPredicted RBP10.06□□□□□ -0.8
GAPVD1-213ENST00000469498 HDLBPQ00341 1268 aaKnown RBP10.06□□□□□ -0.8
GAPVD1-213ENST00000469498 DLGAP5Q15398 846 aa10.06□□□□□ -0.8
GAPVD1-213ENST00000469498 TBC1D10BQ4KMP7 808 aaPredicted RBP10.06□□□□□ -0.8
GAPVD1-213ENST00000469498 RBM26Q5T8P6 1007 aaKnown RBP10.06□□□□□ -0.8
GAPVD1-213ENST00000469498 VPS53Q5VIR6 699 aa10.06□□□□□ -0.8
GAPVD1-213ENST00000469498 HHIPL2Q6UWX4 724 aa10.06□□□□□ -0.8
GAPVD1-213ENST00000469498 TICAM2Q86XR7 235 aa10.06□□□□□ -0.8
GAPVD1-213ENST00000469498 SH3RF3Q8TEJ3 882 aaPredicted RBP10.06□□□□□ -0.8
GAPVD1-213ENST00000469498 RIOK1Q9BRS2 568 aaKnown RBP10.06□□□□□ -0.8
GAPVD1-213ENST00000469498 MYOZ2Q9NPC6 264 aa10.06□□□□□ -0.8
GAPVD1-213ENST00000469498 ANO2Q9NQ90 1003 aa10.06□□□□□ -0.8
GAPVD1-213ENST00000469498 GPRC5DQ9NZD1 345 aa10.06□□□□□ -0.8
GAPVD1-213ENST00000469498 CNOT7Q9UIV1 285 aaKnown RBP10.06□□□□□ -0.8
GAPVD1-213ENST00000469498 SERPINA10Q9UK55 444 aa10.06□□□□□ -0.8
GAPVD1-213ENST00000469498 DOCK1Q14185 1865 aa10.05□□□□□ -0.8
GAPVD1-213ENST00000469498 GPR75-ASB3A0A0A6YYF3 556 aa10.05□□□□□ -0.8
GAPVD1-213ENST00000469498 GLTPD2A6NH11 291 aa10.05□□□□□ -0.8
GAPVD1-213ENST00000469498 PRKAB2O43741 272 aa10.05□□□□□ -0.8
GAPVD1-213ENST00000469498 RGS20O76081 388 aa10.05□□□□□ -0.8
GAPVD1-213ENST00000469498 BAG3O95817 575 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms