RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 DEKP35659 375 aaKnown RBP10.96□□□□□ -0.65
SMC1A-205ENST00000469129 RCAN1P53805 252 aa10.96□□□□□ -0.65
SMC1A-205ENST00000469129 CTDSPL2Q05D32 466 aa10.96□□□□□ -0.65
SMC1A-205ENST00000469129 IFFO2Q5TF58 517 aa10.96□□□□□ -0.65
SMC1A-205ENST00000469129 FOXD4L5Q5VV16 416 aaPredicted RBP10.96□□□□□ -0.65
SMC1A-205ENST00000469129 MSL1Q68DK7 614 aa10.96□□□□□ -0.65
SMC1A-205ENST00000469129 DPP8Q6V1X1 898 aaPredicted RBP10.96□□□□□ -0.65
SMC1A-205ENST00000469129 C2CD5Q86YS7 1000 aa10.96□□□□□ -0.65
SMC1A-205ENST00000469129 MPNDQ8N594 471 aa10.96□□□□□ -0.65
SMC1A-205ENST00000469129 TMEM87AQ8NBN3 555 aa10.96□□□□□ -0.65
SMC1A-205ENST00000469129 NSUN7Q8NE18 718 aaKnown RBP10.96□□□□□ -0.65
SMC1A-205ENST00000469129 FOXD4L4Q8WXT5 416 aaPredicted RBP10.96□□□□□ -0.65
SMC1A-205ENST00000469129 ESR2Q92731 530 aa10.96□□□□□ -0.65
SMC1A-205ENST00000469129 TOMM22Q9NS69 142 aa10.96□□□□□ -0.65
SMC1A-205ENST00000469129 LMBRD1Q9NUN5 540 aa10.96□□□□□ -0.65
SMC1A-205ENST00000469129 SUGT1Q9Y2Z0 365 aa10.96□□□□□ -0.65
SMC1A-205ENST00000469129 BRCA1P38398 1863 aaKnown RBP10.95□□□□□ -0.66
SMC1A-205ENST00000469129 ADAMTSL1Q8N6G6 1762 aa10.95□□□□□ -0.66
SMC1A-205ENST00000469129 ROBO3Q96MS0 1386 aa10.95□□□□□ -0.66
SMC1A-205ENST00000469129 CCDC69A6NI79 296 aa10.95□□□□□ -0.66
SMC1A-205ENST00000469129 KDM4AO75164 1064 aa10.95□□□□□ -0.66
SMC1A-205ENST00000469129 DYNLL1P63167 89 aaKnown RBP10.95□□□□□ -0.66
SMC1A-205ENST00000469129 SBK1Q52WX2 424 aa10.95□□□□□ -0.66
SMC1A-205ENST00000469129 TMEM67Q5HYA8 995 aa10.95□□□□□ -0.66
SMC1A-205ENST00000469129 SYNE3Q6ZMZ3 975 aa10.95□□□□□ -0.66
SMC1A-205ENST00000469129 NFXL1Q6ZNB6 911 aa10.95□□□□□ -0.66
SMC1A-205ENST00000469129 CHST3Q7LGC8 479 aa10.95□□□□□ -0.66
SMC1A-205ENST00000469129 SGMS1Q86VZ5 419 aa10.95□□□□□ -0.66
SMC1A-205ENST00000469129 TMTC2Q8N394 836 aa10.95□□□□□ -0.66
SMC1A-205ENST00000469129 ZNF384Q8TF68 577 aa10.95□□□□□ -0.66
SMC1A-205ENST00000469129 SDR42E1Q8WUS8 393 aa10.95□□□□□ -0.66
SMC1A-205ENST00000469129 CNKSR1Q969H4 720 aa10.95□□□□□ -0.66
SMC1A-205ENST00000469129 SYAP1Q96A49 352 aaPredicted RBP10.95□□□□□ -0.66
SMC1A-205ENST00000469129 UBAC1Q9BSL1 405 aa10.95□□□□□ -0.66
SMC1A-205ENST00000469129 AATFQ9NY61 560 aaKnown RBP eCLIP10.95□□□□□ -0.66
SMC1A-205ENST00000469129 MINDY4BA8MYZ0 360 aa10.94□□□□□ -0.66
SMC1A-205ENST00000469129 IFIT3O14879 490 aaKnown RBP10.94□□□□□ -0.66
SMC1A-205ENST00000469129 ZBTB43O43298 467 aa10.94□□□□□ -0.66
SMC1A-205ENST00000469129 METAP2P50579 478 aaKnown RBP eCLIP10.94□□□□□ -0.669e-6■□□□□ 8.1
SMC1A-205ENST00000469129 PPP4CP60510 307 aa10.94□□□□□ -0.66
SMC1A-205ENST00000469129 CCT2P78371 535 aaKnown RBP10.94□□□□□ -0.66
SMC1A-205ENST00000469129 KRT85P78386 507 aa10.94□□□□□ -0.66
SMC1A-205ENST00000469129 WTAPQ15007 396 aa10.94□□□□□ -0.66
SMC1A-205ENST00000469129 GRIPAP1Q4V328 841 aa10.94□□□□□ -0.66
SMC1A-205ENST00000469129 CC2D2BQ6DHV5 1058 aa10.94□□□□□ -0.66
SMC1A-205ENST00000469129 APOA5Q6Q788 366 aa10.94□□□□□ -0.66
SMC1A-205ENST00000469129 CYB5R4Q7L1T6 521 aa10.94□□□□□ -0.66
SMC1A-205ENST00000469129 ZC3H12CQ9C0D7 883 aaKnown RBP10.94□□□□□ -0.66
SMC1A-205ENST00000469129 ZSCAN16Q9H4T2 348 aaPredicted RBP10.94□□□□□ -0.66
SMC1A-205ENST00000469129 POLLQ9UGP5 575 aa10.94□□□□□ -0.66
SMC1A-205ENST00000469129 STK36Q9NRP7 1315 aa10.93□□□□□ -0.66
SMC1A-205ENST00000469129 GOLGA8AA7E2F4 631 aa10.93□□□□□ -0.66
SMC1A-205ENST00000469129 G3V3G9 751 aa10.93□□□□□ -0.66
SMC1A-205ENST00000469129 ORC4O43929 436 aa10.93□□□□□ -0.66
SMC1A-205ENST00000469129 JAK2O60674 1132 aa10.93□□□□□ -0.66
SMC1A-205ENST00000469129 PRPF40AO75400 957 aaKnown RBP10.93□□□□□ -0.66
SMC1A-205ENST00000469129 USP5P45974 858 aa10.93□□□□□ -0.66
SMC1A-205ENST00000469129 PDE4BQ07343 736 aa10.93□□□□□ -0.66
SMC1A-205ENST00000469129 RRP12Q5JTH9 1297 aaKnown RBP10.93□□□□□ -0.66
SMC1A-205ENST00000469129 MFSD14BQ5SR56 506 aa10.93□□□□□ -0.66
SMC1A-205ENST00000469129 L1TD1Q5T7N2 865 aaKnown RBP10.93□□□□□ -0.66
SMC1A-205ENST00000469129 DCAF8Q5TAQ9 597 aa10.93□□□□□ -0.66
SMC1A-205ENST00000469129 CDC37L1Q7L3B6 337 aa10.93□□□□□ -0.66
SMC1A-205ENST00000469129 IQCA1Q86XH1 822 aa10.93□□□□□ -0.66
SMC1A-205ENST00000469129 SUPT20HQ8NEM7 779 aa10.93□□□□□ -0.66
SMC1A-205ENST00000469129 ZNF622Q969S3 477 aaKnown RBP eCLIP10.93□□□□□ -0.66
SMC1A-205ENST00000469129 GPR101Q96P66 508 aaPredicted RBP10.93□□□□□ -0.66
SMC1A-205ENST00000469129 FHDC1Q9C0D6 1143 aaPredicted RBP10.93□□□□□ -0.66
SMC1A-205ENST00000469129 LY9Q9HBG7 655 aa10.93□□□□□ -0.66
SMC1A-205ENST00000469129 DCP1AQ9NPI6 582 aaPredicted RBP10.93□□□□□ -0.66
SMC1A-205ENST00000469129 BRPF3Q9ULD4 1205 aa10.93□□□□□ -0.66
SMC1A-205ENST00000469129 SLC12A7Q9Y666 1083 aa10.93□□□□□ -0.66
SMC1A-205ENST00000469129 SCN9AQ15858 1988 aa10.93□□□□□ -0.66
SMC1A-205ENST00000469129 GAKO14976 1311 aa10.92□□□□□ -0.66
SMC1A-205ENST00000469129 CCDC196A0A1B0GTZ2 297 aa10.92□□□□□ -0.66
SMC1A-205ENST00000469129 FGRP09769 529 aa10.92□□□□□ -0.66
SMC1A-205ENST00000469129 PPP2R5BQ15173 497 aa10.92□□□□□ -0.66
SMC1A-205ENST00000469129 CTR9Q6PD62 1173 aa10.92□□□□□ -0.66
SMC1A-205ENST00000469129 KLHL34Q8N239 644 aa10.92□□□□□ -0.66
SMC1A-205ENST00000469129 IGDCC4Q8TDY8 1250 aa10.92□□□□□ -0.66
SMC1A-205ENST00000469129 DDX11Q96FC9 970 aa10.92□□□□□ -0.66
SMC1A-205ENST00000469129 RTFDC1Q9BY42 306 aaPredicted RBP10.92□□□□□ -0.66
SMC1A-205ENST00000469129 ZNF287Q9HBT7 754 aa10.92□□□□□ -0.66
SMC1A-205ENST00000469129 NCOA5Q9HCD5 579 aaKnown RBP10.92□□□□□ -0.66
SMC1A-205ENST00000469129 ZSWIM5Q9P217 1185 aa10.92□□□□□ -0.66
SMC1A-205ENST00000469129 HPS5Q9UPZ3 1129 aa10.92□□□□□ -0.66
SMC1A-205ENST00000469129 JAG2Q9Y219 1238 aa10.92□□□□□ -0.66
SMC1A-205ENST00000469129 ELP1O95163 1332 aa10.91□□□□□ -0.66
SMC1A-205ENST00000469129 GPR75-ASB3A0A0A6YYF3 556 aa10.91□□□□□ -0.66
SMC1A-205ENST00000469129 USP17L12C9JPN9 530 aa10.91□□□□□ -0.66
SMC1A-205ENST00000469129 USP17L21D6R901 530 aa10.91□□□□□ -0.66
SMC1A-205ENST00000469129 CTDNEP1O95476 244 aa10.91□□□□□ -0.66
SMC1A-205ENST00000469129 CALM1P0DP23 149 aa10.91□□□□□ -0.66
SMC1A-205ENST00000469129 CALM2P0DP24 149 aa10.91□□□□□ -0.66
SMC1A-205ENST00000469129 CALM3P0DP25 149 aa10.91□□□□□ -0.66
SMC1A-205ENST00000469129 BTDP43251 543 aa10.91□□□□□ -0.66
SMC1A-205ENST00000469129 CCDC178Q5BJE1 867 aa10.91□□□□□ -0.66
SMC1A-205ENST00000469129 ATL3Q6DD88 541 aa10.91□□□□□ -0.66
SMC1A-205ENST00000469129 MICU3Q86XE3 530 aa10.91□□□□□ -0.66
SMC1A-205ENST00000469129 WASF1Q92558 559 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms