RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 STOX1Q6ZVD7 989 aa20.83■□□□□ 0.93
RPL39-202ENST00000468844 ZBED3Q96IU2 234 aaPredicted RBP20.83■□□□□ 0.93
RPL39-202ENST00000468844 TDRD3Q9H7E2 651 aaKnown RBP20.83■□□□□ 0.93
RPL39-202ENST00000468844 DDX4Q9NQI0 724 aaKnown RBP20.83■□□□□ 0.93
RPL39-202ENST00000468844 SMIM22K7EJ46 135 aa20.82■□□□□ 0.92
RPL39-202ENST00000468844 CACNB3P54284 484 aa20.82■□□□□ 0.92
RPL39-202ENST00000468844 CTR9Q6PD62 1173 aa20.82■□□□□ 0.92
RPL39-202ENST00000468844 DDRGK1Q96HY6 314 aa20.82■□□□□ 0.92
RPL39-202ENST00000468844 MCM9Q9NXL9 1143 aa20.82■□□□□ 0.92
RPL39-202ENST00000468844 ZC3H4Q9UPT8 1303 aaKnown RBP20.82■□□□□ 0.92
RPL39-202ENST00000468844 CYP2D7A0A087X1C5 515 aa20.82■□□□□ 0.92
RPL39-202ENST00000468844 USP17L12C9JPN9 530 aa20.82■□□□□ 0.92
RPL39-202ENST00000468844 USP17L21D6R901 530 aa20.82■□□□□ 0.92
RPL39-202ENST00000468844 WNT10BO00744 389 aa20.82■□□□□ 0.92
RPL39-202ENST00000468844 EVX2Q03828 476 aa20.82■□□□□ 0.92
RPL39-202ENST00000468844 PICALMQ13492 652 aa20.82■□□□□ 0.92
RPL39-202ENST00000468844 COL9A3Q14050 684 aaPredicted RBP20.82■□□□□ 0.92
RPL39-202ENST00000468844 GPRC5DQ9NZD1 345 aa20.81■□□□□ 0.92
RPL39-202ENST00000468844 ARPP21Q9UBL0 812 aaPredicted RBP20.81■□□□□ 0.92
RPL39-202ENST00000468844 MINDY4BA8MYZ0 360 aa20.8■□□□□ 0.92
RPL39-202ENST00000468844 E7EWF7 191 aa20.8■□□□□ 0.92
RPL39-202ENST00000468844 PPARAQ07869 468 aa20.8■□□□□ 0.92
RPL39-202ENST00000468844 NBPF9Q3BBW0 867 aa20.8■□□□□ 0.92
RPL39-202ENST00000468844 SAMD7Q7Z3H4 446 aa20.8■□□□□ 0.92
RPL39-202ENST00000468844 TBC1D10CQ8IV04 446 aa20.8■□□□□ 0.92
RPL39-202ENST00000468844 IDI2Q9BXS1 227 aa20.8■□□□□ 0.92
RPL39-202ENST00000468844 CTDSPL2Q05D32 466 aa20.8■□□□□ 0.92
RPL39-202ENST00000468844 RABEP1Q15276 862 aa20.8■□□□□ 0.92
RPL39-202ENST00000468844 SLC4A8Q2Y0W8 1093 aa20.8■□□□□ 0.92
RPL39-202ENST00000468844 SBK1Q52WX2 424 aa20.8■□□□□ 0.92
RPL39-202ENST00000468844 JAKMIP1Q96N16 626 aaKnown RBP20.8■□□□□ 0.92
RPL39-202ENST00000468844 UPF3BQ9BZI7 483 aaKnown RBP20.8■□□□□ 0.92
RPL39-202ENST00000468844 CYP2D6P10635 497 aa20.79■□□□□ 0.92
RPL39-202ENST00000468844 CASTP20810 708 aaKnown RBP20.79■□□□□ 0.92
RPL39-202ENST00000468844 KRT32Q14532 448 aa20.79■□□□□ 0.92
RPL39-202ENST00000468844 FAM198AQ9UFP1 575 aa20.79■□□□□ 0.92
RPL39-202ENST00000468844 ANAPC4Q9UJX5 808 aa20.79■□□□□ 0.92
RPL39-202ENST00000468844 SPDYE2Q495Y8 402 aa20.78■□□□□ 0.92
RPL39-202ENST00000468844 TBC1D10BQ4KMP7 808 aaPredicted RBP20.78■□□□□ 0.92
RPL39-202ENST00000468844 TM6SF1Q9BZW5 370 aa20.78■□□□□ 0.92
RPL39-202ENST00000468844 OSBPL5Q9H0X9 879 aaPredicted RBP20.78■□□□□ 0.92
RPL39-202ENST00000468844 SAP30BPQ9UHR5 308 aaKnown RBP20.78■□□□□ 0.92
RPL39-202ENST00000468844 TACC3Q9Y6A5 838 aa20.78■□□□□ 0.92
RPL39-202ENST00000468844 CLRN2A0PK11 232 aa20.78■□□□□ 0.92
RPL39-202ENST00000468844 CPA1P15085 419 aa20.78■□□□□ 0.92
RPL39-202ENST00000468844 RBM26Q5T8P6 1007 aaKnown RBP20.78■□□□□ 0.92
RPL39-202ENST00000468844 C12orf60Q5U649 245 aa20.78■□□□□ 0.92
RPL39-202ENST00000468844 ZNF70Q9UC06 446 aaPredicted RBP20.78■□□□□ 0.92
RPL39-202ENST00000468844 WDR90Q96KV7 1748 aa20.78■□□□□ 0.92
RPL39-202ENST00000468844 ROBO3Q96MS0 1386 aa20.77■□□□□ 0.92
RPL39-202ENST00000468844 H7C1D1 291 aa20.77■□□□□ 0.92
RPL39-202ENST00000468844 EPS15P42566 896 aa20.77■□□□□ 0.92
RPL39-202ENST00000468844 PLCD1P51178 756 aa20.77■□□□□ 0.92
RPL39-202ENST00000468844 DPY19L2Q6NUT2 758 aa20.77■□□□□ 0.92
RPL39-202ENST00000468844 INCENPQ9NQS7 918 aa20.77■□□□□ 0.92
RPL39-202ENST00000468844 NEDD4P46934 1319 aa20.76■□□□□ 0.91
RPL39-202ENST00000468844 NPM3O75607 178 aaKnown RBP20.76■□□□□ 0.91
RPL39-202ENST00000468844 KIF4BQ2VIQ3 1234 aa20.76■□□□□ 0.91
RPL39-202ENST00000468844 ZFPM1Q8IX07 1006 aa20.76■□□□□ 0.91
RPL39-202ENST00000468844 STK11IPQ8N1F8 1099 aa20.76■□□□□ 0.91
RPL39-202ENST00000468844 NEK1Q96PY6 1258 aa20.76■□□□□ 0.91
RPL39-202ENST00000468844 ZSWIM6Q9HCJ5 1215 aa20.76■□□□□ 0.91
RPL39-202ENST00000468844 MYO1BO43795 1136 aa20.76■□□□□ 0.91
RPL39-202ENST00000468844 PSMA5P28066 241 aa20.76■□□□□ 0.91
RPL39-202ENST00000468844 ANP32AP39687 249 aaKnown RBP20.76■□□□□ 0.91
RPL39-202ENST00000468844 NEK4P51957 841 aa20.76■□□□□ 0.91
RPL39-202ENST00000468844 TCP10Q12799 353 aa20.76■□□□□ 0.91
RPL39-202ENST00000468844 AKNAD1Q5T1N1 836 aa20.76■□□□□ 0.91
RPL39-202ENST00000468844 NKX2-3Q8TAU0 364 aa20.76■□□□□ 0.91
RPL39-202ENST00000468844 TRPM4Q8TD43 1214 aa20.76■□□□□ 0.91
RPL39-202ENST00000468844 STAG1Q8WVM7 1258 aa20.76■□□□□ 0.91
RPL39-202ENST00000468844 GLTPD2A6NH11 291 aa20.75■□□□□ 0.91
RPL39-202ENST00000468844 POLR3DP05423 398 aaPredicted RBP20.75■□□□□ 0.91
RPL39-202ENST00000468844 RUFY3Q7L099 469 aa20.75■□□□□ 0.91
RPL39-202ENST00000468844 L3MBTL3Q96JM7 780 aaPredicted RBP20.75■□□□□ 0.91
RPL39-202ENST00000468844 TMOD2Q9NZR1 351 aa20.75■□□□□ 0.91
RPL39-202ENST00000468844 CD2BP2O95400 341 aaKnown RBP20.74■□□□□ 0.91
RPL39-202ENST00000468844 BLOC1S2Q6QNY1 142 aa20.74■□□□□ 0.91
RPL39-202ENST00000468844 MFSD6Q6ZSS7 791 aa20.74■□□□□ 0.91
RPL39-202ENST00000468844 AMOTL1Q8IY63 956 aa20.74■□□□□ 0.91
RPL39-202ENST00000468844 VEZTQ9HBM0 779 aa20.74■□□□□ 0.91
RPL39-202ENST00000468844 COL2A1P02458 1487 aaPredicted RBP20.74■□□□□ 0.91
RPL39-202ENST00000468844 ASTN2O75129 1339 aaPredicted RBP20.74■□□□□ 0.91
RPL39-202ENST00000468844 TCP10L2B9ZVM9 353 aa20.74■□□□□ 0.91
RPL39-202ENST00000468844 NCOA7Q8NI08 942 aa20.74■□□□□ 0.91
RPL39-202ENST00000468844 CYP46A1Q9Y6A2 500 aa20.74■□□□□ 0.91
RPL39-202ENST00000468844 CNTNAP1P78357 1384 aa20.73■□□□□ 0.91
RPL39-202ENST00000468844 ATRNL1Q5VV63 1379 aa20.73■□□□□ 0.91
RPL39-202ENST00000468844 ENTPD3O75355 529 aa20.73■□□□□ 0.91
RPL39-202ENST00000468844 FGRP09769 529 aa20.73■□□□□ 0.91
RPL39-202ENST00000468844 LMOD1P29536 600 aaPredicted RBP20.73■□□□□ 0.91
RPL39-202ENST00000468844 FKBP1CQ5VVH2 108 aa20.73■□□□□ 0.91
RPL39-202ENST00000468844 SH3BP5LQ7L8J4 393 aa20.73■□□□□ 0.91
RPL39-202ENST00000468844 MB21D2Q8IYB1 491 aaPredicted RBP20.73■□□□□ 0.91
RPL39-202ENST00000468844 TCEANC2Q96MN5 208 aa20.73■□□□□ 0.91
RPL39-202ENST00000468844 TTC14Q96N46 770 aa20.73■□□□□ 0.91
RPL39-202ENST00000468844 DDTLA6NHG4 134 aaPredicted RBP20.72■□□□□ 0.91
RPL39-202ENST00000468844 RPS6KB1P23443 525 aa20.72■□□□□ 0.91
RPL39-202ENST00000468844 HIRAP54198 1017 aaPredicted RBP20.72■□□□□ 0.91
RPL39-202ENST00000468844 DYNLL2Q96FJ2 89 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms