RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 ACDQ96AP0 544 aa5.4□□□□□ -1.54
TMEM39A-204ENST00000468545 MDFIQ99750 246 aa5.4□□□□□ -1.54
TMEM39A-204ENST00000468545 PODXL2Q9NZ53 605 aa5.4□□□□□ -1.54
TMEM39A-204ENST00000468545 FOXD3Q9UJU5 478 aaPredicted RBP5.4□□□□□ -1.54
TMEM39A-204ENST00000468545 CCDC9Q9Y3X0 531 aaKnown RBP5.4□□□□□ -1.54
TMEM39A-204ENST00000468545 SPATA31A3Q5VYP0 1347 aa5.4□□□□□ -1.55
TMEM39A-204ENST00000468545 BRD4O60885 1362 aaPredicted RBP5.4□□□□□ -1.55
TMEM39A-204ENST00000468545 SSH2Q76I76 1423 aa5.4□□□□□ -1.55
TMEM39A-204ENST00000468545 AKAP12Q02952 1782 aa5.39□□□□□ -1.55
TMEM39A-204ENST00000468545 ELOA3CA0A087WX78 387 aaPredicted RBP5.39□□□□□ -1.55
TMEM39A-204ENST00000468545 ELOA3DA6NLF2 546 aaPredicted RBP5.39□□□□□ -1.55
TMEM39A-204ENST00000468545 PHF20L1A8MW92 1017 aa5.39□□□□□ -1.55
TMEM39A-204ENST00000468545 DIAPH1O60610 1272 aaKnown RBP5.39□□□□□ -1.55
TMEM39A-204ENST00000468545 U2AF1L5P0DN76 240 aaPredicted RBP5.39□□□□□ -1.55
TMEM39A-204ENST00000468545 BCRP11274 1271 aa5.39□□□□□ -1.55
TMEM39A-204ENST00000468545 EPXP11678 715 aa5.39□□□□□ -1.55
TMEM39A-204ENST00000468545 ADH7P40394 386 aa5.39□□□□□ -1.55
TMEM39A-204ENST00000468545 U2AF1Q01081 240 aaKnown RBP eCLIP5.39□□□□□ -1.553e-12■■■■□ 20.9
TMEM39A-204ENST00000468545 TBC1D8BQ0IIM8 1120 aa5.39□□□□□ -1.55
TMEM39A-204ENST00000468545 KCNMA1Q12791 1236 aa5.39□□□□□ -1.55
TMEM39A-204ENST00000468545 COL19A1Q14993 1142 aa5.39□□□□□ -1.55
TMEM39A-204ENST00000468545 CHRNA2Q15822 529 aa5.39□□□□□ -1.55
TMEM39A-204ENST00000468545 ELOA3BQ3SY89 546 aa5.39□□□□□ -1.55
TMEM39A-204ENST00000468545 HSP90AB2PQ58FF8 381 aa5.39□□□□□ -1.55
TMEM39A-204ENST00000468545 NPAS4Q8IUM7 802 aa5.39□□□□□ -1.55
TMEM39A-204ENST00000468545 CCDC146Q8IYE0 955 aa5.39□□□□□ -1.55
TMEM39A-204ENST00000468545 C1orf127Q8N9H9 656 aa5.39□□□□□ -1.55
TMEM39A-204ENST00000468545 ELOA3Q8NG57 546 aa5.39□□□□□ -1.55
TMEM39A-204ENST00000468545 TRPM4Q8TD43 1214 aa5.39□□□□□ -1.55
TMEM39A-204ENST00000468545 PNISRQ8TF01 805 aaKnown RBP5.39□□□□□ -1.55
TMEM39A-204ENST00000468545 PMEPA1Q969W9 287 aa5.39□□□□□ -1.55
TMEM39A-204ENST00000468545 NIF3L1Q9GZT8 377 aa5.39□□□□□ -1.55
TMEM39A-204ENST00000468545 DNAJC25Q9H1X3 360 aa5.39□□□□□ -1.55
TMEM39A-204ENST00000468545 CHRDQ9H2X0 955 aa5.39□□□□□ -1.55
TMEM39A-204ENST00000468545 DNAJB12Q9NXW2 375 aaKnown RBP5.39□□□□□ -1.55
TMEM39A-204ENST00000468545 CNTN3Q9P232 1028 aa5.39□□□□□ -1.55
TMEM39A-204ENST00000468545 NUDCQ9Y266 331 aa5.39□□□□□ -1.55
TMEM39A-204ENST00000468545 MAP3K19Q56UN5 1328 aa5.39□□□□□ -1.55
TMEM39A-204ENST00000468545 SBNO1A3KN83 1393 aa5.39□□□□□ -1.55
TMEM39A-204ENST00000468545 USP31Q70CQ4 1352 aa5.39□□□□□ -1.55
TMEM39A-204ENST00000468545 KIF1AQ12756 1690 aa5.38□□□□□ -1.55
TMEM39A-204ENST00000468545 MON2Q7Z3U7 1717 aa5.38□□□□□ -1.55
TMEM39A-204ENST00000468545 OIP5O43482 229 aa5.38□□□□□ -1.55
TMEM39A-204ENST00000468545 CPNE3O75131 537 aaKnown RBP5.38□□□□□ -1.55
TMEM39A-204ENST00000468545 ARHGEF15O94989 841 aa5.38□□□□□ -1.55
TMEM39A-204ENST00000468545 HMOX1P09601 288 aa5.38□□□□□ -1.55
TMEM39A-204ENST00000468545 CES1P23141 567 aa5.38□□□□□ -1.55
TMEM39A-204ENST00000468545 GSK3AP49840 483 aa5.38□□□□□ -1.55
TMEM39A-204ENST00000468545 HNRNPUQ00839 825 aaKnown RBP eCLIP5.38□□□□□ -1.55
TMEM39A-204ENST00000468545 PLCB3Q01970 1234 aa5.38□□□□□ -1.55
TMEM39A-204ENST00000468545 ORC1Q13415 861 aa5.38□□□□□ -1.55
TMEM39A-204ENST00000468545 LYPD4Q6UWN0 246 aa5.38□□□□□ -1.55
TMEM39A-204ENST00000468545 CSRNP1Q96S65 589 aa5.38□□□□□ -1.55
TMEM39A-204ENST00000468545 IGFLR1Q9H665 355 aa5.38□□□□□ -1.55
TMEM39A-204ENST00000468545 ZFYVE28Q9HCC9 887 aa5.38□□□□□ -1.55
TMEM39A-204ENST00000468545 SLC6A14Q9UN76 642 aa5.38□□□□□ -1.55
TMEM39A-204ENST00000468545 KIF20BQ96Q89 1820 aa5.38□□□□□ -1.55
TMEM39A-204ENST00000468545 TNS3Q68CZ2 1445 aa5.38□□□□□ -1.55
TMEM39A-204ENST00000468545 KIF4AO95239 1232 aa5.37□□□□□ -1.55
TMEM39A-204ENST00000468545 CYP2E1P05181 493 aaPredicted RBP5.37□□□□□ -1.55
TMEM39A-204ENST00000468545 P4HBP07237 508 aaKnown RBP5.37□□□□□ -1.55
TMEM39A-204ENST00000468545 CELA2BP08218 269 aaPredicted RBP5.37□□□□□ -1.55
TMEM39A-204ENST00000468545 ALAS2P22557 587 aa5.37□□□□□ -1.55
TMEM39A-204ENST00000468545 HOXC9P31274 260 aa5.37□□□□□ -1.55
TMEM39A-204ENST00000468545 HSPA1LP34931 641 aa5.37□□□□□ -1.55
TMEM39A-204ENST00000468545 EVA1CP58658 441 aa5.37□□□□□ -1.55
TMEM39A-204ENST00000468545 MAP3K10Q02779 954 aa5.37□□□□□ -1.55
TMEM39A-204ENST00000468545 RASSF7Q02833 373 aa5.37□□□□□ -1.55
TMEM39A-204ENST00000468545 HYAL2Q12891 473 aa5.37□□□□□ -1.55
TMEM39A-204ENST00000468545 ENOX2Q16206 610 aaKnown RBP5.37□□□□□ -1.55
TMEM39A-204ENST00000468545 TMEM151AQ8N4L1 468 aa5.37□□□□□ -1.55
TMEM39A-204ENST00000468545 GALNT6Q8NCL4 622 aa5.37□□□□□ -1.55
TMEM39A-204ENST00000468545 EDARADDQ8WWZ3 215 aa5.37□□□□□ -1.55
TMEM39A-204ENST00000468545 IP6K1Q92551 441 aa5.37□□□□□ -1.55
TMEM39A-204ENST00000468545 NSUN5Q96P11 429 aaKnown RBP5.37□□□□□ -1.55
TMEM39A-204ENST00000468545 KANSL3Q9P2N6 904 aa5.37□□□□□ -1.55
TMEM39A-204ENST00000468545 ARHGEF10O15013 1369 aa5.37□□□□□ -1.55
TMEM39A-204ENST00000468545 AATKQ6ZMQ8 1374 aa5.37□□□□□ -1.55
TMEM39A-204ENST00000468545 OVOS2A0A0J9YW53 1432 aa5.37□□□□□ -1.55
TMEM39A-204ENST00000468545 OVOS2Q6IE36 1432 aa5.37□□□□□ -1.55
TMEM39A-204ENST00000468545 PXDNQ92626 1479 aa5.37□□□□□ -1.55
TMEM39A-204ENST00000468545 ROBO1Q9Y6N7 1651 aa5.37□□□□□ -1.55
TMEM39A-204ENST00000468545 LOC102724428A0A0B4J2F2 783 aa5.36□□□□□ -1.55
TMEM39A-204ENST00000468545 PNMA6FA0A0J9YX94 578 aa5.36□□□□□ -1.55
TMEM39A-204ENST00000468545 ZBTB42B2RXF5 422 aa5.36□□□□□ -1.55
TMEM39A-204ENST00000468545 RNF225M0QZC1 329 aaPredicted RBP5.36□□□□□ -1.55
TMEM39A-204ENST00000468545 EIF1AYO14602 144 aaKnown RBP5.36□□□□□ -1.55
TMEM39A-204ENST00000468545 EREGO14944 169 aa5.36□□□□□ -1.55
TMEM39A-204ENST00000468545 GDF11O95390 407 aa5.36□□□□□ -1.55
TMEM39A-204ENST00000468545 EDN3P14138 238 aa5.36□□□□□ -1.55
TMEM39A-204ENST00000468545 IL13P35225 146 aa5.36□□□□□ -1.55
TMEM39A-204ENST00000468545 MAPK8P45983 427 aa5.36□□□□□ -1.55
TMEM39A-204ENST00000468545 SIK1P57059 783 aa5.36□□□□□ -1.55
TMEM39A-204ENST00000468545 MLLT1Q03111 559 aaPredicted RBP5.36□□□□□ -1.55
TMEM39A-204ENST00000468545 EIF4A2Q14240 407 aaKnown RBP5.36□□□□□ -1.55
TMEM39A-204ENST00000468545 SULT6B1Q6IMI4 303 aa5.36□□□□□ -1.55
TMEM39A-204ENST00000468545 KANK3Q6NY19 840 aa5.36□□□□□ -1.55
TMEM39A-204ENST00000468545 C1orf229Q6ZS94 237 aaPredicted RBP5.36□□□□□ -1.55
TMEM39A-204ENST00000468545 ARHGEF25Q86VW2 580 aa5.36□□□□□ -1.55
TMEM39A-204ENST00000468545 USHBP1Q8N6Y0 703 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms