RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 DBNDD2Q9BQY9 259 aa7.04□□□□□ -1.28
SHQ1-205ENST00000468371 CCDC39Q9UFE4 941 aa7.04□□□□□ -1.28
SHQ1-205ENST00000468371 EP400Q96L91 3159 aa7.04□□□□□ -1.28
SHQ1-205ENST00000468371 TRIM75PA6NK02 468 aa7.04□□□□□ -1.28
SHQ1-205ENST00000468371 GTF2A2P52657 109 aa7.04□□□□□ -1.28
SHQ1-205ENST00000468371 PTPN12Q05209 780 aaKnown RBP7.04□□□□□ -1.28
SHQ1-205ENST00000468371 RABEP1Q15276 862 aa7.04□□□□□ -1.28
SHQ1-205ENST00000468371 ZYXQ15942 572 aaKnown RBP7.04□□□□□ -1.28
SHQ1-205ENST00000468371 TNNI3KQ59H18 835 aa7.04□□□□□ -1.28
SHQ1-205ENST00000468371 TDRD7Q8NHU6 1098 aaKnown RBP7.04□□□□□ -1.28
SHQ1-205ENST00000468371 EFCC1Q9HA90 598 aa7.04□□□□□ -1.28
SHQ1-205ENST00000468371 CIZ1Q9ULV3 898 aaPredicted RBP7.04□□□□□ -1.28
SHQ1-205ENST00000468371 RIPOR2Q9Y4F9 1068 aa7.04□□□□□ -1.28
SHQ1-205ENST00000468371 TRIM17Q9Y577 477 aa7.04□□□□□ -1.28
SHQ1-205ENST00000468371 FPGT-TNNI3KV9GXZ4 949 aa7.04□□□□□ -1.28
SHQ1-205ENST00000468371 KLRK1P26718 216 aa7.03□□□□□ -1.28
SHQ1-205ENST00000468371 HDLBPQ00341 1268 aaKnown RBP7.03□□□□□ -1.28
SHQ1-205ENST00000468371 ZNF771Q7L3S4 317 aaPredicted RBP7.03□□□□□ -1.28
SHQ1-205ENST00000468371 FASTKD5Q7L8L6 764 aaKnown RBP7.03□□□□□ -1.28
SHQ1-205ENST00000468371 RUFY2Q8WXA3 655 aa7.03□□□□□ -1.28
SHQ1-205ENST00000468371 PDCL3Q9H2J4 239 aa7.03□□□□□ -1.28
SHQ1-205ENST00000468371 ZHX1Q9UKY1 873 aaPredicted RBP7.03□□□□□ -1.28
SHQ1-205ENST00000468371 FKTNO75072 461 aa7.03□□□□□ -1.28
SHQ1-205ENST00000468371 NBPF12Q5TAG4 269 aaPredicted RBP7.03□□□□□ -1.28
SHQ1-205ENST00000468371 SPC24Q8NBT2 197 aa7.03□□□□□ -1.28
SHQ1-205ENST00000468371 COA7Q96BR5 231 aa7.03□□□□□ -1.28
SHQ1-205ENST00000468371 ERO1AQ96HE7 468 aa7.03□□□□□ -1.28
SHQ1-205ENST00000468371 PAGR1Q9BTK6 254 aa7.03□□□□□ -1.28
SHQ1-205ENST00000468371 NAPBQ9H115 298 aa7.03□□□□□ -1.28
SHQ1-205ENST00000468371 SHTN1A0MZ66 631 aa7.03□□□□□ -1.28
SHQ1-205ENST00000468371 ERICH2A1L162 156 aa7.03□□□□□ -1.28
SHQ1-205ENST00000468371 BAG4O95429 457 aaKnown RBP7.03□□□□□ -1.28
SHQ1-205ENST00000468371 ADORA1P30542 326 aa7.03□□□□□ -1.28
SHQ1-205ENST00000468371 TMEM39BQ9GZU3 492 aa7.03□□□□□ -1.28
SHQ1-205ENST00000468371 ECHDC1Q9NTX5 307 aa7.03□□□□□ -1.28
SHQ1-205ENST00000468371 SMARCA5O60264 1052 aaPredicted RBP7.02□□□□□ -1.29
SHQ1-205ENST00000468371 PRDX5P30044 214 aa7.02□□□□□ -1.29
SHQ1-205ENST00000468371 HHIPL2Q6UWX4 724 aa7.02□□□□□ -1.29
SHQ1-205ENST00000468371 VTI1AQ96AJ9 217 aa7.02□□□□□ -1.29
SHQ1-205ENST00000468371 DHX36Q9H2U1 1008 aaKnown RBP7.02□□□□□ -1.29
SHQ1-205ENST00000468371 VPS37CA5D8V6 355 aaPredicted RBP7.02□□□□□ -1.29
SHQ1-205ENST00000468371 CCNA1P78396 465 aa7.02□□□□□ -1.29
SHQ1-205ENST00000468371 FMR1Q06787 632 aaKnown RBP eCLIP7.02□□□□□ -1.29
SHQ1-205ENST00000468371 MOB2Q70IA6 237 aa7.02□□□□□ -1.29
SHQ1-205ENST00000468371 LRP10Q7Z4F1 713 aa7.02□□□□□ -1.29
SHQ1-205ENST00000468371 ERO1BQ86YB8 467 aa7.02□□□□□ -1.29
SHQ1-205ENST00000468371 CHMP4CQ96CF2 233 aa7.02□□□□□ -1.29
SHQ1-205ENST00000468371 GCC1Q96CN9 775 aa7.02□□□□□ -1.29
SHQ1-205ENST00000468371 MAP7D2Q96T17 732 aa7.02□□□□□ -1.29
SHQ1-205ENST00000468371 GDPD2Q9HCC8 539 aa7.02□□□□□ -1.29
SHQ1-205ENST00000468371 SLC5A4Q9NY91 659 aa7.02□□□□□ -1.29
SHQ1-205ENST00000468371 PI4KBQ9UBF8 816 aa7.02□□□□□ -1.29
SHQ1-205ENST00000468371 TLL2Q9Y6L7 1015 aa7.02□□□□□ -1.29
SHQ1-205ENST00000468371 SCN11AQ9UI33 1791 aa7.02□□□□□ -1.29
SHQ1-205ENST00000468371 PDE4BQ07343 736 aa7.02□□□□□ -1.29
SHQ1-205ENST00000468371 FBXO33Q7Z6M2 555 aa7.02□□□□□ -1.29
SHQ1-205ENST00000468371 SAPCD2Q86UD0 394 aa7.02□□□□□ -1.29
SHQ1-205ENST00000468371 ANKRD44Q8N8A2 993 aa7.02□□□□□ -1.29
SHQ1-205ENST00000468371 FAM151AQ8WW52 585 aa7.02□□□□□ -1.29
SHQ1-205ENST00000468371 TANGO6Q9C0B7 1094 aa7.02□□□□□ -1.29
SHQ1-205ENST00000468371 TSPY26PQ9H489 355 aa7.02□□□□□ -1.29
SHQ1-205ENST00000468371 ARHGEF10LQ9HCE6 1279 aa7.02□□□□□ -1.29
SHQ1-205ENST00000468371 SLC4A4Q9Y6R1 1079 aa7.02□□□□□ -1.29
SHQ1-205ENST00000468371 RTL9Q8NET4 1388 aa7.01□□□□□ -1.29
SHQ1-205ENST00000468371 FIBPO43427 364 aa7.01□□□□□ -1.29
SHQ1-205ENST00000468371 MAP4K4O95819 1239 aaPredicted RBP7.01□□□□□ -1.29
SHQ1-205ENST00000468371 IL1R1P14778 569 aa7.01□□□□□ -1.29
SHQ1-205ENST00000468371 UBXN2AP68543 259 aa7.01□□□□□ -1.29
SHQ1-205ENST00000468371 CBX1P83916 185 aa7.01□□□□□ -1.29
SHQ1-205ENST00000468371 RREB1Q92766 1687 aa7.01□□□□□ -1.29
SHQ1-205ENST00000468371 PITPNM2Q9BZ72 1349 aa7.01□□□□□ -1.29
SHQ1-205ENST00000468371 MYH14Q7Z406 1995 aaKnown RBP7.01□□□□□ -1.29
SHQ1-205ENST00000468371 PNMA6EA0A0J9YXQ4 647 aa7.01□□□□□ -1.29
SHQ1-205ENST00000468371 GOLGA6L6A8MZA4 724 aa7.01□□□□□ -1.29
SHQ1-205ENST00000468371 TNPO2O14787 897 aaKnown RBP7.01□□□□□ -1.29
SHQ1-205ENST00000468371 TBC1D8O95759 1140 aa7.01□□□□□ -1.29
SHQ1-205ENST00000468371 ZAP70P43403 619 aa7.01□□□□□ -1.29
SHQ1-205ENST00000468371 PARK7Q99497 189 aaKnown RBP7.01□□□□□ -1.29
SHQ1-205ENST00000468371 ASNSP08243 561 aa7.01□□□□□ -1.29
SHQ1-205ENST00000468371 RASGRF1Q13972 1273 aa7.01□□□□□ -1.29
SHQ1-205ENST00000468371 RABL6Q3YEC7 729 aaPredicted RBP7.01□□□□□ -1.29
SHQ1-205ENST00000468371 RALYLQ86SE5 291 aaKnown RBP7.01□□□□□ -1.29
SHQ1-205ENST00000468371 OPTNQ96CV9 577 aa7.01□□□□□ -1.29
SHQ1-205ENST00000468371 PAG1Q9NWQ8 432 aa7.01□□□□□ -1.29
SHQ1-205ENST00000468371 ZFYP08048 801 aaPredicted RBP7□□□□□ -1.29
SHQ1-205ENST00000468371 CNGA1P29973 690 aa7□□□□□ -1.29
SHQ1-205ENST00000468371 ZNF280AP59817 542 aaPredicted RBP7□□□□□ -1.29
SHQ1-205ENST00000468371 PPP4R3BQ5MIZ7 849 aa7□□□□□ -1.29
SHQ1-205ENST00000468371 SYNE3Q6ZMZ3 975 aa7□□□□□ -1.29
SHQ1-205ENST00000468371 FOXP4Q8IVH2 680 aaPredicted RBP7□□□□□ -1.29
SHQ1-205ENST00000468371 ZNF830Q96NB3 372 aaPredicted RBP7□□□□□ -1.29
SHQ1-205ENST00000468371 RANBP6O60518 1105 aaKnown RBP7□□□□□ -1.29
SHQ1-205ENST00000468371 FKBP1AP62942 108 aaKnown RBP7□□□□□ -1.29
SHQ1-205ENST00000468371 MECOMQ03112 1051 aa7□□□□□ -1.29
SHQ1-205ENST00000468371 CERKLQ49MI3 558 aaPredicted RBP7□□□□□ -1.29
SHQ1-205ENST00000468371 GAS2L3Q86XJ1 694 aa7□□□□□ -1.29
SHQ1-205ENST00000468371 UPF3BQ9BZI7 483 aaKnown RBP7□□□□□ -1.29
SHQ1-205ENST00000468371 RGPD3A6NKT7 1758 aaPredicted RBP7□□□□□ -1.29
SHQ1-205ENST00000468371 RGPD4Q7Z3J3 1758 aa7□□□□□ -1.29
SHQ1-205ENST00000468371 HIP1O00291 1037 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms