RNA–Protein interactions for RNA: ENST00000468358.5

CLDN11-202, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 593 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-202ENST00000468358 GPATCH3Q96I76 525 aa21.07■□□□□ 0.96
CLDN11-202ENST00000468358 WNK4Q96J92 1243 aa21.07■□□□□ 0.96
CLDN11-202ENST00000468358 DDX4Q9NQI0 724 aaKnown RBP21.07■□□□□ 0.96
CLDN11-202ENST00000468358 RFX7Q2KHR2 1363 aa21.07■□□□□ 0.96
CLDN11-202ENST00000468358 HSPA8P11142 646 aaKnown RBP21.06■□□□□ 0.96
CLDN11-202ENST00000468358 ATP5JP18859 108 aa21.06■□□□□ 0.96
CLDN11-202ENST00000468358 SREBF2Q12772 1141 aa21.06■□□□□ 0.96
CLDN11-202ENST00000468358 VGLL4Q14135 290 aa21.06■□□□□ 0.96
CLDN11-202ENST00000468358 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.06■□□□□ 0.96
CLDN11-202ENST00000468358 ADGRA1Q86SQ6 560 aa21.06■□□□□ 0.96
CLDN11-202ENST00000468358 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.06■□□□□ 0.96
CLDN11-202ENST00000468358 TRPA1O75762 1119 aa21.05■□□□□ 0.96
CLDN11-202ENST00000468358 ZBTB48P10074 688 aaPredicted RBP21.05■□□□□ 0.96
CLDN11-202ENST00000468358 AAMPQ13685 434 aa21.05■□□□□ 0.96
CLDN11-202ENST00000468358 MIGA1Q8NAN2 632 aa21.05■□□□□ 0.96
CLDN11-202ENST00000468358 EXOC6Q8TAG9 804 aa21.05■□□□□ 0.96
CLDN11-202ENST00000468358 OPTNQ96CV9 577 aa21.05■□□□□ 0.96
CLDN11-202ENST00000468358 EDC3Q96F86 508 aaKnown RBP21.05■□□□□ 0.96
CLDN11-202ENST00000468358 PAG1Q9NWQ8 432 aa21.05■□□□□ 0.96
CLDN11-202ENST00000468358 COL13A1Q5TAT6 717 aaPredicted RBP21.04■□□□□ 0.96
CLDN11-202ENST00000468358 ZKSCAN4Q969J2 545 aaPredicted RBP21.04■□□□□ 0.96
CLDN11-202ENST00000468358 ECHDC1Q9NTX5 307 aa21.04■□□□□ 0.96
CLDN11-202ENST00000468358 DDTLA6NHG4 134 aaPredicted RBP21.03■□□□□ 0.96
CLDN11-202ENST00000468358 DYNLL1P63167 89 aaKnown RBP21.03■□□□□ 0.96
CLDN11-202ENST00000468358 SLC9C2Q5TAH2 1124 aa21.03■□□□□ 0.96
CLDN11-202ENST00000468358 SH3BP5LQ7L8J4 393 aa21.03■□□□□ 0.96
CLDN11-202ENST00000468358 TGFBRAP1Q8WUH2 860 aa21.03■□□□□ 0.96
CLDN11-202ENST00000468358 OTUD5Q96G74 571 aa21.03■□□□□ 0.96
CLDN11-202ENST00000468358 RNF186Q9NXI6 227 aa21.03■□□□□ 0.96
CLDN11-202ENST00000468358 CDK5RAP2Q96SN8 1893 aa21.03■□□□□ 0.96
CLDN11-202ENST00000468358 MANSC4A6NHS7 340 aaPredicted RBP21.02■□□□□ 0.96
CLDN11-202ENST00000468358 INPP5BP32019 993 aa21.02■□□□□ 0.96
CLDN11-202ENST00000468358 PPP4CP60510 307 aa21.02■□□□□ 0.96
CLDN11-202ENST00000468358 MAPKAPK5Q8IW41 473 aa21.02■□□□□ 0.96
CLDN11-202ENST00000468358 CNKSR2Q8WXI2 1034 aa21.02■□□□□ 0.96
CLDN11-202ENST00000468358 HAUS7Q99871 368 aa21.02■□□□□ 0.96
CLDN11-202ENST00000468358 OSBPL5Q9H0X9 879 aaPredicted RBP21.02■□□□□ 0.96
CLDN11-202ENST00000468358 PRDM10Q9NQV6 1147 aa21.02■□□□□ 0.96
CLDN11-202ENST00000468358 NPM3O75607 178 aaKnown RBP21.01■□□□□ 0.95
CLDN11-202ENST00000468358 PDE6AP16499 860 aa21.01■□□□□ 0.95
CLDN11-202ENST00000468358 IRX6P78412 446 aaPredicted RBP21.01■□□□□ 0.95
CLDN11-202ENST00000468358 ANKRD45Q5TZF3 282 aa21.01■□□□□ 0.95
CLDN11-202ENST00000468358 TSHZ3Q63HK5 1081 aa21.01■□□□□ 0.95
CLDN11-202ENST00000468358 SAGE1Q9NXZ1 904 aa21.01■□□□□ 0.95
CLDN11-202ENST00000468358 SNCAIPQ9Y6H5 919 aa21.01■□□□□ 0.95
CLDN11-202ENST00000468358 FOCADQ5VW36 1801 aa21■□□□□ 0.95
CLDN11-202ENST00000468358 GJA5P36382 358 aa21■□□□□ 0.95
CLDN11-202ENST00000468358 USP5P45974 858 aa21■□□□□ 0.95
CLDN11-202ENST00000468358 TM4SF4P48230 202 aa21■□□□□ 0.95
CLDN11-202ENST00000468358 HDAC1Q13547 482 aaPredicted RBP21■□□□□ 0.95
CLDN11-202ENST00000468358 TMED8Q6PL24 325 aaPredicted RBP21■□□□□ 0.95
CLDN11-202ENST00000468358 CERS3Q8IU89 383 aa21■□□□□ 0.95
CLDN11-202ENST00000468358 GCC1Q96CN9 775 aa21■□□□□ 0.95
CLDN11-202ENST00000468358 DDX24Q9GZR7 859 aaKnown RBP eCLIP21■□□□□ 0.95
CLDN11-202ENST00000468358 ZNF532Q9HCE3 1301 aa21■□□□□ 0.95
CLDN11-202ENST00000468358 MYH7P12883 1935 aa21■□□□□ 0.95
CLDN11-202ENST00000468358 ATRNL1Q5VV63 1379 aa20.99■□□□□ 0.95
CLDN11-202ENST00000468358 SPDYE5A6NIY4 337 aa20.99■□□□□ 0.95
CLDN11-202ENST00000468358 INHBEP58166 350 aa20.99■□□□□ 0.95
CLDN11-202ENST00000468358 ERO1BQ86YB8 467 aa20.99■□□□□ 0.95
CLDN11-202ENST00000468358 RWDD1Q9H446 243 aaPredicted RBP20.99■□□□□ 0.95
CLDN11-202ENST00000468358 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.99■□□□□ 0.95
CLDN11-202ENST00000468358 FLT1P17948 1338 aa20.99■□□□□ 0.95
CLDN11-202ENST00000468358 MAGEB6P1A0A0J9YX57 407 aa20.98■□□□□ 0.95
CLDN11-202ENST00000468358 FAM196BA6NMK8 535 aa20.98■□□□□ 0.95
CLDN11-202ENST00000468358 SLURP2P0DP57 97 aa20.98■□□□□ 0.95
CLDN11-202ENST00000468358 TRIM34Q9BYJ4 488 aa20.98■□□□□ 0.95
CLDN11-202ENST00000468358 SAP30BPQ9UHR5 308 aaKnown RBP20.98■□□□□ 0.95
CLDN11-202ENST00000468358 ZNF112Q9UJU3 913 aa20.98■□□□□ 0.95
CLDN11-202ENST00000468358 COL2A1P02458 1487 aaPredicted RBP20.98■□□□□ 0.95
CLDN11-202ENST00000468358 CASP8AP2Q9UKL3 1982 aa20.97■□□□□ 0.95
CLDN11-202ENST00000468358 SLC4A8Q2Y0W8 1093 aa20.97■□□□□ 0.95
CLDN11-202ENST00000468358 TNS4Q8IZW8 715 aa20.97■□□□□ 0.95
CLDN11-202ENST00000468358 DHX36Q9H2U1 1008 aaKnown RBP20.97■□□□□ 0.95
CLDN11-202ENST00000468358 MYH1P12882 1939 aa20.97■□□□□ 0.95
CLDN11-202ENST00000468358 LAMB1P07942 1786 aa20.97■□□□□ 0.95
CLDN11-202ENST00000468358 CCL15-CCL14A0A0B4J2E2 113 aa20.96■□□□□ 0.95
CLDN11-202ENST00000468358 ERC2O15083 957 aa20.96■□□□□ 0.95
CLDN11-202ENST00000468358 TBC1D8O95759 1140 aa20.96■□□□□ 0.95
CLDN11-202ENST00000468358 GTF2A2P52657 109 aa20.96■□□□□ 0.95
CLDN11-202ENST00000468358 CCL15Q16663 113 aa20.96■□□□□ 0.95
CLDN11-202ENST00000468358 OTUD7BQ6GQQ9 843 aa20.96■□□□□ 0.95
CLDN11-202ENST00000468358 ZSCAN25Q6NSZ9 544 aa20.96■□□□□ 0.95
CLDN11-202ENST00000468358 CRACR2BQ8N4Y2 399 aaPredicted RBP20.96■□□□□ 0.95
CLDN11-202ENST00000468358 OTUD7AQ8TE49 926 aaPredicted RBP20.96■□□□□ 0.95
CLDN11-202ENST00000468358 PICK1Q9NRD5 415 aa20.96■□□□□ 0.95
CLDN11-202ENST00000468358 PALD1Q9ULE6 856 aa20.96■□□□□ 0.95
CLDN11-202ENST00000468358 TTC41PQ6P2S7 1318 aa20.96■□□□□ 0.95
CLDN11-202ENST00000468358 DOCK1Q14185 1865 aa20.95■□□□□ 0.94
CLDN11-202ENST00000468358 ALDH1A1P00352 501 aa20.95■□□□□ 0.94
CLDN11-202ENST00000468358 HLA-DOAP06340 250 aa20.95■□□□□ 0.94
CLDN11-202ENST00000468358 MX1P20591 662 aa20.95■□□□□ 0.94
CLDN11-202ENST00000468358 ADD2P35612 726 aa20.95■□□□□ 0.94
CLDN11-202ENST00000468358 PPIL2Q13356 520 aa20.95■□□□□ 0.94
CLDN11-202ENST00000468358 B4GALNT3Q6L9W6 998 aa20.95■□□□□ 0.94
CLDN11-202ENST00000468358 IFNL1Q8IU54 200 aa20.95■□□□□ 0.94
CLDN11-202ENST00000468358 CRNKL1Q9BZJ0 848 aaKnown RBP20.95■□□□□ 0.94
CLDN11-202ENST00000468358 PI4KBQ9UBF8 816 aa20.95■□□□□ 0.94
CLDN11-202ENST00000468358 PHF20L1A8MW92 1017 aa20.94■□□□□ 0.94
CLDN11-202ENST00000468358 IGF2BP3O00425 579 aaKnown RBP eCLIP20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms