RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 CHRM1P11229 460 aaPredicted RBP9.79□□□□□ -0.84
BRCA1-208ENST00000468300 ECE2O60344 883 aa9.79□□□□□ -0.84
BRCA1-208ENST00000468300 APPP05067 770 aa9.79□□□□□ -0.84
BRCA1-208ENST00000468300 DACT2Q5SW24 774 aa9.79□□□□□ -0.84
BRCA1-208ENST00000468300 STAG1Q8WVM7 1258 aa9.79□□□□□ -0.84
BRCA1-208ENST00000468300 SIPA1L1O43166 1804 aa9.79□□□□□ -0.84
BRCA1-208ENST00000468300 RAB3GAP1Q15042 981 aa9.78□□□□□ -0.84
BRCA1-208ENST00000468300 CC2D2BQ6DHV5 1058 aa9.78□□□□□ -0.84
BRCA1-208ENST00000468300 GIMAP6Q6P9H5 292 aa9.78□□□□□ -0.84
BRCA1-208ENST00000468300 PODNQ7Z5L7 613 aa9.78□□□□□ -0.84
BRCA1-208ENST00000468300 DZIP1Q86YF9 867 aaKnown RBP9.78□□□□□ -0.84
BRCA1-208ENST00000468300 EYA3Q99504 573 aa9.78□□□□□ -0.84
BRCA1-208ENST00000468300 SENP2Q9HC62 589 aa9.78□□□□□ -0.84
BRCA1-208ENST00000468300 MYH1P12882 1939 aa9.78□□□□□ -0.84
BRCA1-208ENST00000468300 WDR19Q8NEZ3 1342 aa9.78□□□□□ -0.84
BRCA1-208ENST00000468300 PPARAQ07869 468 aa9.78□□□□□ -0.84
BRCA1-208ENST00000468300 PLCD3Q8N3E9 789 aa9.78□□□□□ -0.84
BRCA1-208ENST00000468300 NECAB1Q8N987 351 aa9.78□□□□□ -0.84
BRCA1-208ENST00000468300 TBC1D22AQ8WUA7 517 aa9.78□□□□□ -0.84
BRCA1-208ENST00000468300 NAPBQ9H115 298 aa9.78□□□□□ -0.84
BRCA1-208ENST00000468300 CHMP5Q9NZZ3 219 aa9.78□□□□□ -0.84
BRCA1-208ENST00000468300 CYP2D6P10635 497 aa9.77□□□□□ -0.85
BRCA1-208ENST00000468300 PRELPP51888 382 aa9.77□□□□□ -0.85
BRCA1-208ENST00000468300 FKBP1AP62942 108 aaKnown RBP9.77□□□□□ -0.85
BRCA1-208ENST00000468300 FAM193AP78312 1265 aa9.77□□□□□ -0.85
BRCA1-208ENST00000468300 AKNAD1Q5T1N1 836 aa9.77□□□□□ -0.85
BRCA1-208ENST00000468300 ILDR2Q71H61 639 aa9.77□□□□□ -0.85
BRCA1-208ENST00000468300 NCOA7Q8NI08 942 aa9.77□□□□□ -0.85
BRCA1-208ENST00000468300 IGDCC4Q8TDY8 1250 aa9.77□□□□□ -0.85
BRCA1-208ENST00000468300 BRF1Q92994 677 aa9.77□□□□□ -0.85
BRCA1-208ENST00000468300 CIZ1Q9ULV3 898 aaPredicted RBP9.77□□□□□ -0.85
BRCA1-208ENST00000468300 SUGT1Q9Y2Z0 365 aa9.77□□□□□ -0.85
BRCA1-208ENST00000468300 DAGLAQ9Y4D2 1042 aa9.77□□□□□ -0.85
BRCA1-208ENST00000468300 PCDHAC2Q9Y5I4 1007 aa9.77□□□□□ -0.85
BRCA1-208ENST00000468300 B4E1Z4 1266 aa9.77□□□□□ -0.85
BRCA1-208ENST00000468300 ZSWIM5Q9P217 1185 aa9.77□□□□□ -0.85
BRCA1-208ENST00000468300 HPS5Q9UPZ3 1129 aa9.77□□□□□ -0.85
BRCA1-208ENST00000468300 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.77□□□□□ -0.85
BRCA1-208ENST00000468300 CTDNEP1O95476 244 aa9.76□□□□□ -0.85
BRCA1-208ENST00000468300 BTDP43251 543 aa9.76□□□□□ -0.85
BRCA1-208ENST00000468300 GSTO1P78417 241 aa9.76□□□□□ -0.85
BRCA1-208ENST00000468300 APOBRQ0VD83 1088 aa9.76□□□□□ -0.85
BRCA1-208ENST00000468300 SCRN1Q12765 414 aa9.76□□□□□ -0.85
BRCA1-208ENST00000468300 SBK1Q52WX2 424 aa9.76□□□□□ -0.85
BRCA1-208ENST00000468300 CCDC93Q567U6 631 aa9.76□□□□□ -0.85
BRCA1-208ENST00000468300 STRIP1Q5VSL9 837 aa9.76□□□□□ -0.85
BRCA1-208ENST00000468300 CCDC83Q8IWF9 413 aa9.76□□□□□ -0.85
BRCA1-208ENST00000468300 FAM177A1Q8N128 213 aaPredicted RBP9.76□□□□□ -0.85
BRCA1-208ENST00000468300 NLGN2Q8NFZ4 835 aa9.76□□□□□ -0.85
BRCA1-208ENST00000468300 ZSCAN31Q96LW9 406 aaPredicted RBP9.76□□□□□ -0.85
BRCA1-208ENST00000468300 SH2B1Q9NRF2 756 aaPredicted RBP9.76□□□□□ -0.85
BRCA1-208ENST00000468300 ATP8A2Q9NTI2 1148 aa9.76□□□□□ -0.85
BRCA1-208ENST00000468300 PIM2Q9P1W9 311 aa9.76□□□□□ -0.85
BRCA1-208ENST00000468300 CD2APQ9Y5K6 639 aa9.76□□□□□ -0.85
BRCA1-208ENST00000468300 ROBO3Q96MS0 1386 aa9.76□□□□□ -0.85
BRCA1-208ENST00000468300 USP17L12C9JPN9 530 aa9.76□□□□□ -0.85
BRCA1-208ENST00000468300 USP17L21D6R901 530 aa9.76□□□□□ -0.85
BRCA1-208ENST00000468300 PRC1O43663 620 aa9.76□□□□□ -0.85
BRCA1-208ENST00000468300 USP17L8P0C7I0 530 aa9.76□□□□□ -0.85
BRCA1-208ENST00000468300 POLD1P28340 1107 aa9.76□□□□□ -0.85
BRCA1-208ENST00000468300 TDO2P48775 406 aa9.76□□□□□ -0.85
BRCA1-208ENST00000468300 ANKRD1Q15327 319 aa9.76□□□□□ -0.85
BRCA1-208ENST00000468300 RTKN2Q8IZC4 609 aa9.76□□□□□ -0.85
BRCA1-208ENST00000468300 KCTD17Q8N5Z5 321 aa9.76□□□□□ -0.85
BRCA1-208ENST00000468300 PDIA3P30101 505 aaKnown RBP9.76□□□□□ -0.85
BRCA1-208ENST00000468300 GRIPAP1Q4V328 841 aa9.76□□□□□ -0.85
BRCA1-208ENST00000468300 APOBEC3HQ6NTF7 200 aaKnown RBP9.76□□□□□ -0.85
BRCA1-208ENST00000468300 GTF3C6Q969F1 213 aa9.76□□□□□ -0.85
BRCA1-208ENST00000468300 NACAP1Q9BZK3 213 aa9.76□□□□□ -0.85
BRCA1-208ENST00000468300 ZNF277Q9NRM2 450 aaPredicted RBP9.76□□□□□ -0.85
BRCA1-208ENST00000468300 NFKBIEO00221 500 aa9.75□□□□□ -0.85
BRCA1-208ENST00000468300 SH2B2O14492 632 aaPredicted RBP9.75□□□□□ -0.85
BRCA1-208ENST00000468300 PFKFB2O60825 505 aa9.75□□□□□ -0.85
BRCA1-208ENST00000468300 MCM5P33992 734 aa9.75□□□□□ -0.85
BRCA1-208ENST00000468300 NFKBIBQ15653 356 aa9.75□□□□□ -0.85
BRCA1-208ENST00000468300 TNPO1Q92973 898 aaKnown RBP9.75□□□□□ -0.85
BRCA1-208ENST00000468300 CRNKL1Q9BZJ0 848 aaKnown RBP9.75□□□□□ -0.85
BRCA1-208ENST00000468300 LY9Q9HBG7 655 aa9.75□□□□□ -0.85
BRCA1-208ENST00000468300 KDM4AO75164 1064 aa9.75□□□□□ -0.85
BRCA1-208ENST00000468300 C12orf60Q5U649 245 aa9.75□□□□□ -0.85
BRCA1-208ENST00000468300 CLEC17AQ6ZS10 378 aa9.75□□□□□ -0.85
BRCA1-208ENST00000468300 USP17L3A6NCW0 530 aa9.74□□□□□ -0.85
BRCA1-208ENST00000468300 USP17L4A6NCW7 530 aa9.74□□□□□ -0.85
BRCA1-208ENST00000468300 F8W031 263 aaPredicted RBP9.74□□□□□ -0.85
BRCA1-208ENST00000468300 SCNN1DP51172 638 aa9.74□□□□□ -0.85
BRCA1-208ENST00000468300 PLCD1P51178 756 aa9.74□□□□□ -0.85
BRCA1-208ENST00000468300 USP17L1Q7RTZ2 530 aa9.74□□□□□ -0.85
BRCA1-208ENST00000468300 SUPT20HQ8NEM7 779 aa9.74□□□□□ -0.85
BRCA1-208ENST00000468300 TGFBRAP1Q8WUH2 860 aa9.74□□□□□ -0.85
BRCA1-208ENST00000468300 ZNF274Q96GC6 653 aaPredicted RBP9.74□□□□□ -0.85
BRCA1-208ENST00000468300 GMLQ99445 158 aa9.74□□□□□ -0.85
BRCA1-208ENST00000468300 MRIQ9BWK5 157 aa9.74□□□□□ -0.85
BRCA1-208ENST00000468300 TMX4Q9H1E5 349 aaPredicted RBP9.74□□□□□ -0.85
BRCA1-208ENST00000468300 DDX4Q9NQI0 724 aaKnown RBP9.74□□□□□ -0.85
BRCA1-208ENST00000468300 TTF2Q9UNY4 1162 aaKnown RBP9.74□□□□□ -0.85
BRCA1-208ENST00000468300 FLT1P17948 1338 aa9.74□□□□□ -0.85
BRCA1-208ENST00000468300 PPIP5K2O43314 1243 aa9.74□□□□□ -0.85
BRCA1-208ENST00000468300 WDHD1O75717 1129 aaPredicted RBP9.74□□□□□ -0.85
BRCA1-208ENST00000468300 PTMAP06454 111 aaKnown RBP9.74□□□□□ -0.85
BRCA1-208ENST00000468300 STK3Q13188 491 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms