RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 MS4A4AQ96JQ5 239 aa20.94■□□□□ 0.94
SSBP1-207ENST00000468267 MCOLN1Q9GZU1 580 aa20.94■□□□□ 0.94
SSBP1-207ENST00000468267 ZNF112Q9UJU3 913 aa20.94■□□□□ 0.94
SSBP1-207ENST00000468267 SNCAIPQ9Y6H5 919 aa20.94■□□□□ 0.94
SSBP1-207ENST00000468267 SPDYE5A6NIY4 337 aa20.93■□□□□ 0.94
SSBP1-207ENST00000468267 ZAP70P43403 619 aa20.93■□□□□ 0.94
SSBP1-207ENST00000468267 AACSQ86V21 672 aa20.93■□□□□ 0.94
SSBP1-207ENST00000468267 R3HDMLQ9H3Y0 253 aa20.93■□□□□ 0.94
SSBP1-207ENST00000468267 DDX4Q9NQI0 724 aaKnown RBP20.93■□□□□ 0.94
SSBP1-207ENST00000468267 DOCK2Q92608 1830 aa20.92■□□□□ 0.94
SSBP1-207ENST00000468267 GPR25O00155 361 aa20.92■□□□□ 0.94
SSBP1-207ENST00000468267 NPM3O75607 178 aaKnown RBP20.92■□□□□ 0.94
SSBP1-207ENST00000468267 GTF2A2P52657 109 aa20.92■□□□□ 0.94
SSBP1-207ENST00000468267 OTUD7BQ6GQQ9 843 aa20.92■□□□□ 0.94
SSBP1-207ENST00000468267 SH3BP5LQ7L8J4 393 aa20.92■□□□□ 0.94
SSBP1-207ENST00000468267 ERO1BQ86YB8 467 aa20.92■□□□□ 0.94
SSBP1-207ENST00000468267 ZNF296Q8WUU4 475 aaPredicted RBP20.92■□□□□ 0.94
SSBP1-207ENST00000468267 OTUD5Q96G74 571 aa20.92■□□□□ 0.94
SSBP1-207ENST00000468267 PTPN18Q99952 460 aa20.92■□□□□ 0.94
SSBP1-207ENST00000468267 IL1RAPL2Q9NP60 686 aa20.92■□□□□ 0.94
SSBP1-207ENST00000468267 IGSF3O75054 1194 aa20.91■□□□□ 0.94
SSBP1-207ENST00000468267 INPP5BP32019 993 aa20.91■□□□□ 0.94
SSBP1-207ENST00000468267 ATRNL1Q5VV63 1379 aa20.91■□□□□ 0.94
SSBP1-207ENST00000468267 NAA16Q6N069 864 aaPredicted RBP20.91■□□□□ 0.94
SSBP1-207ENST00000468267 KIF1BPQ96EK5 621 aa20.91■□□□□ 0.94
SSBP1-207ENST00000468267 MAST2Q6P0Q8 1798 aa20.9■□□□□ 0.94
SSBP1-207ENST00000468267 DDTLA6NHG4 134 aaPredicted RBP20.9■□□□□ 0.94
SSBP1-207ENST00000468267 RAB11FIP3O75154 756 aa20.9■□□□□ 0.94
SSBP1-207ENST00000468267 MAP3K10Q02779 954 aa20.9■□□□□ 0.94
SSBP1-207ENST00000468267 PICALMQ13492 652 aa20.9■□□□□ 0.94
SSBP1-207ENST00000468267 ZSCAN29Q8IWY8 852 aaPredicted RBP20.9■□□□□ 0.94
SSBP1-207ENST00000468267 BRI3BPQ8WY22 251 aa20.9■□□□□ 0.94
SSBP1-207ENST00000468267 PIH1D3Q9NQM4 214 aaKnown RBP20.9■□□□□ 0.94
SSBP1-207ENST00000468267 APBB1O00213 710 aa20.89■□□□□ 0.93
SSBP1-207ENST00000468267 PPIL2Q13356 520 aa20.89■□□□□ 0.93
SSBP1-207ENST00000468267 CTU1Q7Z7A3 348 aaKnown RBP20.89■□□□□ 0.93
SSBP1-207ENST00000468267 CLASRPQ8N2M8 674 aaKnown RBP20.89■□□□□ 0.93
SSBP1-207ENST00000468267 NOL10Q9BSC4 688 aaKnown RBP20.89■□□□□ 0.93
SSBP1-207ENST00000468267 CCL15-CCL14A0A0B4J2E2 113 aa20.88■□□□□ 0.93
SSBP1-207ENST00000468267 PHF20L1A8MW92 1017 aa20.88■□□□□ 0.93
SSBP1-207ENST00000468267 IRF6O14896 467 aa20.88■□□□□ 0.93
SSBP1-207ENST00000468267 FKTNO75072 461 aa20.88■□□□□ 0.93
SSBP1-207ENST00000468267 PPP4CP60510 307 aa20.88■□□□□ 0.93
SSBP1-207ENST00000468267 PPATQ06203 517 aa20.88■□□□□ 0.93
SSBP1-207ENST00000468267 CCL15Q16663 113 aa20.88■□□□□ 0.93
SSBP1-207ENST00000468267 NOL9Q5SY16 702 aaKnown RBP20.88■□□□□ 0.93
SSBP1-207ENST00000468267 BAG3O95817 575 aa20.87■□□□□ 0.93
SSBP1-207ENST00000468267 TEX11Q8IYF3 940 aa20.87■□□□□ 0.93
SSBP1-207ENST00000468267 SH3RF3Q8TEJ3 882 aaPredicted RBP20.87■□□□□ 0.93
SSBP1-207ENST00000468267 CDK5RAP2Q96SN8 1893 aa20.86■□□□□ 0.93
SSBP1-207ENST00000468267 CETPP11597 493 aa20.86■□□□□ 0.93
SSBP1-207ENST00000468267 PLCG2P16885 1265 aa20.86■□□□□ 0.93
SSBP1-207ENST00000468267 CRHR2Q13324 411 aa20.86■□□□□ 0.93
SSBP1-207ENST00000468267 SNAPC2Q13487 334 aa20.86■□□□□ 0.93
SSBP1-207ENST00000468267 ADGRA1Q86SQ6 560 aa20.86■□□□□ 0.93
SSBP1-207ENST00000468267 AATFQ9NY61 560 aaKnown RBP eCLIP20.86■□□□□ 0.93
SSBP1-207ENST00000468267 NDUFB9Q9Y6M9 179 aa20.86■□□□□ 0.93
SSBP1-207ENST00000468267 TBC1D12O60347 775 aa20.85■□□□□ 0.93
SSBP1-207ENST00000468267 IDH1O75874 414 aaKnown RBP20.85■□□□□ 0.93
SSBP1-207ENST00000468267 IFIT2P09913 472 aaKnown RBP20.85■□□□□ 0.93
SSBP1-207ENST00000468267 OSBPL5Q9H0X9 879 aaPredicted RBP20.85■□□□□ 0.93
SSBP1-207ENST00000468267 ANTXR1Q9H6X2 564 aa20.85■□□□□ 0.93
SSBP1-207ENST00000468267 COL2A1P02458 1487 aaPredicted RBP20.85■□□□□ 0.93
SSBP1-207ENST00000468267 CCDC85CA6NKD9 419 aa20.84■□□□□ 0.93
SSBP1-207ENST00000468267 SLURP2P0DP57 97 aa20.84■□□□□ 0.93
SSBP1-207ENST00000468267 CYP7A1P22680 504 aa20.84■□□□□ 0.93
SSBP1-207ENST00000468267 FAM43AQ8N2R8 423 aa20.84■□□□□ 0.93
SSBP1-207ENST00000468267 KCNH4Q9UQ05 1017 aa20.84■□□□□ 0.93
SSBP1-207ENST00000468267 FOCADQ5VW36 1801 aa20.83■□□□□ 0.93
SSBP1-207ENST00000468267 PKN2Q16513 984 aaKnown RBP20.83■□□□□ 0.93
SSBP1-207ENST00000468267 TMED8Q6PL24 325 aaPredicted RBP20.83■□□□□ 0.93
SSBP1-207ENST00000468267 SCYL3Q8IZE3 742 aa20.83■□□□□ 0.93
SSBP1-207ENST00000468267 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.83■□□□□ 0.93
SSBP1-207ENST00000468267 YTHDC1Q96MU7 727 aaKnown RBP20.83■□□□□ 0.93
SSBP1-207ENST00000468267 ZCCHC17Q9NP64 241 aaKnown RBP20.83■□□□□ 0.93
SSBP1-207ENST00000468267 HTTP42858 3142 aa20.82■□□□□ 0.92
SSBP1-207ENST00000468267 BTBD19C9JJ37 291 aa20.82■□□□□ 0.92
SSBP1-207ENST00000468267 CTNND1O60716 968 aaKnown RBP20.82■□□□□ 0.92
SSBP1-207ENST00000468267 MAP3K12Q12852 859 aa20.82■□□□□ 0.92
SSBP1-207ENST00000468267 MAGEB6Q8N7X4 407 aa20.82■□□□□ 0.92
SSBP1-207ENST00000468267 TGFBRAP1Q8WUH2 860 aa20.82■□□□□ 0.92
SSBP1-207ENST00000468267 BCL11AQ9H165 835 aa20.82■□□□□ 0.92
SSBP1-207ENST00000468267 PICK1Q9NRD5 415 aa20.82■□□□□ 0.92
SSBP1-207ENST00000468267 PTPRAP18433 802 aa20.81■□□□□ 0.92
SSBP1-207ENST00000468267 RRP1P56182 461 aaKnown RBP20.81■□□□□ 0.92
SSBP1-207ENST00000468267 DYNLL1P63167 89 aaKnown RBP20.81■□□□□ 0.92
SSBP1-207ENST00000468267 TTF1Q15361 905 aaPredicted RBP20.81■□□□□ 0.92
SSBP1-207ENST00000468267 TAF1CQ15572 869 aaPredicted RBP20.81■□□□□ 0.92
SSBP1-207ENST00000468267 LRRCC1Q9C099 1032 aa20.81■□□□□ 0.92
SSBP1-207ENST00000468267 DHX36Q9H2U1 1008 aaKnown RBP20.81■□□□□ 0.92
SSBP1-207ENST00000468267 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.81■□□□□ 0.92
SSBP1-207ENST00000468267 ZFYVE28Q9HCC9 887 aa20.81■□□□□ 0.92
SSBP1-207ENST00000468267 DOCK1Q14185 1865 aa20.81■□□□□ 0.92
SSBP1-207ENST00000468267 CXCL11O14625 94 aa20.8■□□□□ 0.92
SSBP1-207ENST00000468267 MAPKAPK5Q8IW41 473 aa20.8■□□□□ 0.92
SSBP1-207ENST00000468267 PI4KBQ9UBF8 816 aa20.8■□□□□ 0.92
SSBP1-207ENST00000468267 ZHX2Q9Y6X8 837 aa20.8■□□□□ 0.92
SSBP1-207ENST00000468267 FLT1P17948 1338 aa20.79■□□□□ 0.92
SSBP1-207ENST00000468267 PHIPQ8WWQ0 1821 aa20.79■□□□□ 0.92
SSBP1-207ENST00000468267 FAM196BA6NMK8 535 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms