RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 ZAP70P43403 619 aa17.83■□□□□ 0.44
COMMD3-206ENST00000468179 GTF2A2P52657 109 aa17.83■□□□□ 0.44
COMMD3-206ENST00000468179 NOM1Q5C9Z4 860 aaKnown RBP17.83■□□□□ 0.44
COMMD3-206ENST00000468179 MIGA2Q7L4E1 593 aa17.83■□□□□ 0.44
COMMD3-206ENST00000468179 IFNL1Q8IU54 200 aa17.83■□□□□ 0.44
COMMD3-206ENST00000468179 SIRT2Q8IXJ6 389 aa17.83■□□□□ 0.44
COMMD3-206ENST00000468179 CFHR5Q9BXR6 569 aa17.83■□□□□ 0.44
COMMD3-206ENST00000468179 IL1RAPL2Q9NP60 686 aa17.83■□□□□ 0.44
COMMD3-206ENST00000468179 TLR7Q9NYK1 1049 aaKnown RBP17.83■□□□□ 0.44
COMMD3-206ENST00000468179 APBB1O00213 710 aa17.82■□□□□ 0.44
COMMD3-206ENST00000468179 CYP2E1P05181 493 aaPredicted RBP17.82■□□□□ 0.44
COMMD3-206ENST00000468179 CERS3Q8IU89 383 aa17.82■□□□□ 0.44
COMMD3-206ENST00000468179 YTHDC1Q96MU7 727 aaKnown RBP17.82■□□□□ 0.44
COMMD3-206ENST00000468179 TESPA1A2RU30 521 aaPredicted RBP17.81■□□□□ 0.44
COMMD3-206ENST00000468179 SPDYE5A6NIY4 337 aa17.81■□□□□ 0.44
COMMD3-206ENST00000468179 WDHD1O75717 1129 aaPredicted RBP17.81■□□□□ 0.44
COMMD3-206ENST00000468179 TBC1D8O95759 1140 aa17.81■□□□□ 0.44
COMMD3-206ENST00000468179 RHBDL3P58872 404 aa17.81■□□□□ 0.44
COMMD3-206ENST00000468179 PICALMQ13492 652 aa17.81■□□□□ 0.44
COMMD3-206ENST00000468179 TTF1Q15361 905 aaPredicted RBP17.81■□□□□ 0.44
COMMD3-206ENST00000468179 ZNF384Q8TF68 577 aa17.81■□□□□ 0.44
COMMD3-206ENST00000468179 OTUD5Q96G74 571 aa17.81■□□□□ 0.44
COMMD3-206ENST00000468179 ZNF112Q9UJU3 913 aa17.81■□□□□ 0.44
COMMD3-206ENST00000468179 AKAP11Q9UKA4 1901 aa17.81■□□□□ 0.44
COMMD3-206ENST00000468179 PPATQ06203 517 aa17.8■□□□□ 0.44
COMMD3-206ENST00000468179 MAP3K12Q12852 859 aa17.8■□□□□ 0.44
COMMD3-206ENST00000468179 TEX11Q8IYF3 940 aa17.8■□□□□ 0.44
COMMD3-206ENST00000468179 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.8■□□□□ 0.44
COMMD3-206ENST00000468179 ZKSCAN4Q969J2 545 aaPredicted RBP17.8■□□□□ 0.44
COMMD3-206ENST00000468179 SNCAIPQ9Y6H5 919 aa17.8■□□□□ 0.44
COMMD3-206ENST00000468179 IDH1O75874 414 aaKnown RBP17.79■□□□□ 0.44
COMMD3-206ENST00000468179 CETPP11597 493 aa17.79■□□□□ 0.44
COMMD3-206ENST00000468179 GJA5P36382 358 aa17.79■□□□□ 0.44
COMMD3-206ENST00000468179 PPP4CP60510 307 aa17.79■□□□□ 0.44
COMMD3-206ENST00000468179 SNAPC2Q13487 334 aa17.79■□□□□ 0.44
COMMD3-206ENST00000468179 DGKZQ13574 1117 aa17.79■□□□□ 0.44
COMMD3-206ENST00000468179 ZFPM1Q8IX07 1006 aa17.79■□□□□ 0.44
COMMD3-206ENST00000468179 LRRCC1Q9C099 1032 aa17.79■□□□□ 0.44
COMMD3-206ENST00000468179 MYH2Q9UKX2 1941 aa17.79■□□□□ 0.44
COMMD3-206ENST00000468179 RFX7Q2KHR2 1363 aa17.78■□□□□ 0.44
COMMD3-206ENST00000468179 GPR25O00155 361 aa17.78■□□□□ 0.44
COMMD3-206ENST00000468179 TBC1D12O60347 775 aa17.78■□□□□ 0.44
COMMD3-206ENST00000468179 RRP1P56182 461 aaKnown RBP17.78■□□□□ 0.44
COMMD3-206ENST00000468179 PPIL2Q13356 520 aa17.78■□□□□ 0.44
COMMD3-206ENST00000468179 NOL9Q5SY16 702 aaKnown RBP17.78■□□□□ 0.44
COMMD3-206ENST00000468179 MS4A4AQ96JQ5 239 aa17.78■□□□□ 0.44
COMMD3-206ENST00000468179 DHX36Q9H2U1 1008 aaKnown RBP17.78■□□□□ 0.44
COMMD3-206ENST00000468179 DDX4Q9NQI0 724 aaKnown RBP17.78■□□□□ 0.44
COMMD3-206ENST00000468179 PIH1D3Q9NQM4 214 aaKnown RBP17.78■□□□□ 0.44
COMMD3-206ENST00000468179 CCL15-CCL14A0A0B4J2E2 113 aa17.77■□□□□ 0.44
COMMD3-206ENST00000468179 IGF2BP3O00425 579 aaKnown RBP eCLIP17.77■□□□□ 0.44
COMMD3-206ENST00000468179 FKTNO75072 461 aa17.77■□□□□ 0.44
COMMD3-206ENST00000468179 CYP7A1P22680 504 aa17.77■□□□□ 0.44
COMMD3-206ENST00000468179 INPP5BP32019 993 aa17.77■□□□□ 0.44
COMMD3-206ENST00000468179 MAP3K10Q02779 954 aa17.77■□□□□ 0.44
COMMD3-206ENST00000468179 CCL15Q16663 113 aa17.77■□□□□ 0.44
COMMD3-206ENST00000468179 ZNF296Q8WUU4 475 aaPredicted RBP17.77■□□□□ 0.44
COMMD3-206ENST00000468179 ABHD8Q96I13 439 aa17.77■□□□□ 0.44
COMMD3-206ENST00000468179 PICK1Q9NRD5 415 aa17.77■□□□□ 0.44
COMMD3-206ENST00000468179 AATFQ9NY61 560 aaKnown RBP eCLIP17.77■□□□□ 0.44
COMMD3-206ENST00000468179 ATRNL1Q5VV63 1379 aa17.77■□□□□ 0.43
COMMD3-206ENST00000468179 DDTLA6NHG4 134 aaPredicted RBP17.76■□□□□ 0.43
COMMD3-206ENST00000468179 CTNND1O60716 968 aaKnown RBP17.76■□□□□ 0.43
COMMD3-206ENST00000468179 PKN2Q16513 984 aaKnown RBP17.76■□□□□ 0.43
COMMD3-206ENST00000468179 SH3BP5LQ7L8J4 393 aa17.76■□□□□ 0.43
COMMD3-206ENST00000468179 CTU1Q7Z7A3 348 aaKnown RBP17.76■□□□□ 0.43
COMMD3-206ENST00000468179 SH3RF3Q8TEJ3 882 aaPredicted RBP17.76■□□□□ 0.43
COMMD3-206ENST00000468179 MCOLN1Q9GZU1 580 aa17.76■□□□□ 0.43
COMMD3-206ENST00000468179 OSBPL5Q9H0X9 879 aaPredicted RBP17.76■□□□□ 0.43
COMMD3-206ENST00000468179 BCL11AQ9H165 835 aa17.76■□□□□ 0.43
COMMD3-206ENST00000468179 ZCCHC17Q9NP64 241 aaKnown RBP17.76■□□□□ 0.43
COMMD3-206ENST00000468179 COL2A1P02458 1487 aaPredicted RBP17.76■□□□□ 0.43
COMMD3-206ENST00000468179 SCYL3Q8IZE3 742 aa17.75■□□□□ 0.43
COMMD3-206ENST00000468179 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.75■□□□□ 0.43
COMMD3-206ENST00000468179 ZFYVE28Q9HCC9 887 aa17.75■□□□□ 0.43
COMMD3-206ENST00000468179 PHF20L1A8MW92 1017 aa17.74■□□□□ 0.43
COMMD3-206ENST00000468179 IRF6O14896 467 aa17.74■□□□□ 0.43
COMMD3-206ENST00000468179 MKRN4PQ13434 485 aaPredicted RBP17.74■□□□□ 0.43
COMMD3-206ENST00000468179 MAGEB6Q8N7X4 407 aa17.74■□□□□ 0.43
COMMD3-206ENST00000468179 TGFBRAP1Q8WUH2 860 aa17.74■□□□□ 0.43
COMMD3-206ENST00000468179 BRI3BPQ8WY22 251 aa17.74■□□□□ 0.43
COMMD3-206ENST00000468179 PTPN18Q99952 460 aa17.74■□□□□ 0.43
COMMD3-206ENST00000468179 DCTPP1Q9H773 170 aa17.74■□□□□ 0.43
COMMD3-206ENST00000468179 PI4KBQ9UBF8 816 aa17.74■□□□□ 0.43
COMMD3-206ENST00000468179 HERC5Q9UII4 1024 aaKnown RBP17.74■□□□□ 0.43
COMMD3-206ENST00000468179 CXCL11O14625 94 aa17.73■□□□□ 0.43
COMMD3-206ENST00000468179 ATP5JP18859 108 aa17.73■□□□□ 0.43
COMMD3-206ENST00000468179 GPATCH3Q96I76 525 aa17.73■□□□□ 0.43
COMMD3-206ENST00000468179 DNAJC2Q99543 621 aaKnown RBP17.73■□□□□ 0.43
COMMD3-206ENST00000468179 TRIM34Q9BYJ4 488 aa17.73■□□□□ 0.43
COMMD3-206ENST00000468179 ANTXR1Q9H6X2 564 aa17.73■□□□□ 0.43
COMMD3-206ENST00000468179 KCNH4Q9UQ05 1017 aa17.73■□□□□ 0.43
COMMD3-206ENST00000468179 CRHR2Q13324 411 aa17.72■□□□□ 0.43
COMMD3-206ENST00000468179 ARHGEF6Q15052 776 aa17.72■□□□□ 0.43
COMMD3-206ENST00000468179 TAF1CQ15572 869 aaPredicted RBP17.72■□□□□ 0.43
COMMD3-206ENST00000468179 ADGRA1Q86SQ6 560 aa17.72■□□□□ 0.43
COMMD3-206ENST00000468179 FOXP4Q8IVH2 680 aaPredicted RBP17.72■□□□□ 0.43
COMMD3-206ENST00000468179 ERO1AQ96HE7 468 aa17.72■□□□□ 0.43
COMMD3-206ENST00000468179 AK9Q5TCS8 1911 aa17.72■□□□□ 0.43
COMMD3-206ENST00000468179 OTOFQ9HC10 1997 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms