RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 BICC1Q9H694 974 aaKnown RBP9.79□□□□□ -0.84
HPS4-209ENST00000466781 DENND2AQ9ULE3 1009 aa9.79□□□□□ -0.84
HPS4-209ENST00000466781 FAM135BQ49AJ0 1406 aa9.78□□□□□ -0.84
HPS4-209ENST00000466781 DAPK3O43293 454 aa9.78□□□□□ -0.84
HPS4-209ENST00000466781 RPL13P26373 211 aaKnown RBP9.78□□□□□ -0.84
HPS4-209ENST00000466781 SMTNP53814 917 aa9.78□□□□□ -0.84
HPS4-209ENST00000466781 KIF5AQ12840 1032 aa9.78□□□□□ -0.84
HPS4-209ENST00000466781 IFT74Q96LB3 600 aa9.78□□□□□ -0.84
HPS4-209ENST00000466781 NACA2Q9H009 215 aa9.78□□□□□ -0.84
HPS4-209ENST00000466781 BCS1LQ9Y276 419 aa9.78□□□□□ -0.84
HPS4-209ENST00000466781 CDC42BPGQ6DT37 1551 aa9.78□□□□□ -0.84
HPS4-209ENST00000466781 CTAGE9A4FU28 777 aa9.78□□□□□ -0.84
HPS4-209ENST00000466781 ANO6Q4KMQ2 910 aa9.78□□□□□ -0.84
HPS4-209ENST00000466781 BMP2KLQ5H9B9 411 aa9.78□□□□□ -0.84
HPS4-209ENST00000466781 HAUS2Q9NVX0 235 aa9.78□□□□□ -0.84
HPS4-209ENST00000466781 PARD3Q8TEW0 1356 aa9.78□□□□□ -0.84
HPS4-209ENST00000466781 ABCA9Q8IUA7 1624 aa9.78□□□□□ -0.84
HPS4-209ENST00000466781 KRT86O43790 486 aa9.78□□□□□ -0.84
HPS4-209ENST00000466781 RRP9O43818 475 aaKnown RBP9.78□□□□□ -0.84
HPS4-209ENST00000466781 TRPC3Q13507 836 aa9.78□□□□□ -0.84
HPS4-209ENST00000466781 CERKQ8TCT0 537 aa9.78□□□□□ -0.84
HPS4-209ENST00000466781 TSGA10Q9BZW7 698 aa9.78□□□□□ -0.84
HPS4-209ENST00000466781 FAM204AQ9H8W3 233 aa9.78□□□□□ -0.84
HPS4-209ENST00000466781 MTRF1LQ9UGC7 380 aaKnown RBP9.78□□□□□ -0.84
HPS4-209ENST00000466781 MTUS1Q9ULD2 1270 aa9.78□□□□□ -0.84
HPS4-209ENST00000466781 RAPGEF1Q13905 1077 aa9.78□□□□□ -0.84
HPS4-209ENST00000466781 DDX21Q9NR30 783 aaKnown RBP eCLIP9.78□□□□□ -0.84
HPS4-209ENST00000466781 STK10O94804 968 aaKnown RBP9.78□□□□□ -0.84
HPS4-209ENST00000466781 KRT9P35527 623 aa9.78□□□□□ -0.84
HPS4-209ENST00000466781 EAPPQ56P03 285 aaPredicted RBP9.78□□□□□ -0.84
HPS4-209ENST00000466781 ARHGAP27Q6ZUM4 889 aa9.78□□□□□ -0.84
HPS4-209ENST00000466781 LGR6Q9HBX8 967 aa9.78□□□□□ -0.84
HPS4-209ENST00000466781 MAST3O60307 1309 aa9.78□□□□□ -0.84
HPS4-209ENST00000466781 KIAA0232Q92628 1395 aa9.77□□□□□ -0.84
HPS4-209ENST00000466781 MYOM2P54296 1465 aa9.77□□□□□ -0.84
HPS4-209ENST00000466781 PPP1R21Q6ZMI0 780 aa9.77□□□□□ -0.84
HPS4-209ENST00000466781 AOPEPQ8N6M6 819 aa9.77□□□□□ -0.84
HPS4-209ENST00000466781 GABPB2Q8TAK5 448 aaPredicted RBP9.77□□□□□ -0.84
HPS4-209ENST00000466781 CCDC169A6NNP5 214 aa9.77□□□□□ -0.85
HPS4-209ENST00000466781 DKC1O60832 514 aaKnown RBP eCLIP9.77□□□□□ -0.85
HPS4-209ENST00000466781 NMIQ13287 307 aaPredicted RBP9.77□□□□□ -0.85
HPS4-209ENST00000466781 GIMAP6Q6P9H5 292 aa9.77□□□□□ -0.85
HPS4-209ENST00000466781 CCDC42Q96M95 316 aa9.77□□□□□ -0.85
HPS4-209ENST00000466781 METTL22Q9BUU2 404 aaPredicted RBP9.77□□□□□ -0.85
HPS4-209ENST00000466781 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.77□□□□□ -0.85
HPS4-209ENST00000466781 SMIM23A6NLE4 172 aa9.77□□□□□ -0.85
HPS4-209ENST00000466781 DYNC1I1O14576 645 aa9.77□□□□□ -0.85
HPS4-209ENST00000466781 ITGA6P23229 1130 aa9.77□□□□□ -0.85
HPS4-209ENST00000466781 ATP8B2P98198 1209 aa9.77□□□□□ -0.85
HPS4-209ENST00000466781 TCIRG1Q13488 830 aa9.77□□□□□ -0.85
HPS4-209ENST00000466781 INF2Q27J81 1249 aa9.77□□□□□ -0.85
HPS4-209ENST00000466781 TEX11Q8IYF3 940 aa9.77□□□□□ -0.85
HPS4-209ENST00000466781 EXOC7Q9UPT5 735 aa9.77□□□□□ -0.85
HPS4-209ENST00000466781 CHMP2AO43633 222 aa9.77□□□□□ -0.85
HPS4-209ENST00000466781 C2CD5Q86YS7 1000 aa9.77□□□□□ -0.85
HPS4-209ENST00000466781 SH3TC1Q8TE82 1336 aa9.77□□□□□ -0.85
HPS4-209ENST00000466781 CSRNP2Q9H175 543 aa9.77□□□□□ -0.85
HPS4-209ENST00000466781 CACYBPQ9HB71 228 aaKnown RBP9.77□□□□□ -0.85
HPS4-209ENST00000466781 HCLS1P14317 486 aaPredicted RBP9.76□□□□□ -0.85
HPS4-209ENST00000466781 SV2BQ7L1I2 683 aa9.76□□□□□ -0.85
HPS4-209ENST00000466781 CCDC25Q86WR0 208 aa9.76□□□□□ -0.85
HPS4-209ENST00000466781 GPCPD1Q9NPB8 672 aa9.76□□□□□ -0.85
HPS4-209ENST00000466781 PRDM10Q9NQV6 1147 aa9.76□□□□□ -0.85
HPS4-209ENST00000466781 CALUO43852 315 aaPredicted RBP9.76□□□□□ -0.85
HPS4-209ENST00000466781 PHKG2P15735 406 aa9.76□□□□□ -0.85
HPS4-209ENST00000466781 CUL4BQ13620 913 aa9.76□□□□□ -0.85
HPS4-209ENST00000466781 DNAJC10Q8IXB1 793 aa9.76□□□□□ -0.85
HPS4-209ENST00000466781 NSMCE1Q8WV22 266 aa9.76□□□□□ -0.85
HPS4-209ENST00000466781 CNPY2Q9Y2B0 182 aa9.76□□□□□ -0.85
HPS4-209ENST00000466781 NUCB1Q02818 461 aa9.76□□□□□ -0.85
HPS4-209ENST00000466781 SEC62Q99442 399 aaKnown RBP9.76□□□□□ -0.85
HPS4-209ENST00000466781 CARD10Q9BWT7 1032 aa9.76□□□□□ -0.85
HPS4-209ENST00000466781 TBC1D2Q9BYX2 928 aa9.76□□□□□ -0.85
HPS4-209ENST00000466781 KCNK9Q9NPC2 374 aa9.76□□□□□ -0.85
HPS4-209ENST00000466781 THRAP3Q9Y2W1 955 aaKnown RBP9.76□□□□□ -0.85
HPS4-209ENST00000466781 ROBO2Q9HCK4 1378 aa9.76□□□□□ -0.85
HPS4-209ENST00000466781 A1BGP04217 495 aa9.76□□□□□ -0.85
HPS4-209ENST00000466781 UAP1Q16222 522 aaPredicted RBP9.76□□□□□ -0.85
HPS4-209ENST00000466781 CEP128Q6ZU80 1094 aa9.76□□□□□ -0.85
HPS4-209ENST00000466781 TMX3Q96JJ7 454 aa9.76□□□□□ -0.85
HPS4-209ENST00000466781 CAPZA3Q96KX2 299 aa9.76□□□□□ -0.85
HPS4-209ENST00000466781 TCEANC2Q96MN5 208 aa9.76□□□□□ -0.85
HPS4-209ENST00000466781 PTPDC1A2A3K4 754 aa9.76□□□□□ -0.85
HPS4-209ENST00000466781 SPTLC2O15270 562 aa9.76□□□□□ -0.85
HPS4-209ENST00000466781 ZBED4O75132 1171 aa9.76□□□□□ -0.85
HPS4-209ENST00000466781 HIBADHP31937 336 aaKnown RBP9.76□□□□□ -0.85
HPS4-209ENST00000466781 CCT6AP40227 531 aaKnown RBP9.76□□□□□ -0.85
HPS4-209ENST00000466781 LIN9Q5TKA1 542 aa9.76□□□□□ -0.85
HPS4-209ENST00000466781 CHST3Q7LGC8 479 aa9.76□□□□□ -0.85
HPS4-209ENST00000466781 PLIN2Q99541 437 aa9.76□□□□□ -0.85
HPS4-209ENST00000466781 STK24Q9Y6E0 443 aa9.76□□□□□ -0.85
HPS4-209ENST00000466781 MAPK8IP2Q13387 824 aaPredicted RBP9.75□□□□□ -0.85
HPS4-209ENST00000466781 TBC1D31Q96DN5 1066 aa9.75□□□□□ -0.85
HPS4-209ENST00000466781 FAM89AQ96GI7 184 aa9.75□□□□□ -0.85
HPS4-209ENST00000466781 ERCC5P28715 1186 aaPredicted RBP9.75□□□□□ -0.85
HPS4-209ENST00000466781 DPY19L2Q6NUT2 758 aa9.75□□□□□ -0.85
HPS4-209ENST00000466781 ATRIPQ8WXE1 791 aa9.75□□□□□ -0.85
HPS4-209ENST00000466781 CEP152O94986 1710 aa9.75□□□□□ -0.85
HPS4-209ENST00000466781 MYCLP12524 364 aaPredicted RBP9.75□□□□□ -0.85
HPS4-209ENST00000466781 SYT1P21579 422 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms