RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 USP17L3A6NCW0 530 aa17.96■□□□□ 0.47
SNED1-208ENST00000466618 USP17L4A6NCW7 530 aa17.96■□□□□ 0.47
SNED1-208ENST00000466618 PDIA4P13667 645 aaKnown RBP17.96■□□□□ 0.47
SNED1-208ENST00000466618 TTF1Q15361 905 aaPredicted RBP17.96■□□□□ 0.47
SNED1-208ENST00000466618 DACT2Q5SW24 774 aa17.96■□□□□ 0.47
SNED1-208ENST00000466618 USP17L1Q7RTZ2 530 aa17.96■□□□□ 0.47
SNED1-208ENST00000466618 KBTBD3Q8NAB2 608 aa17.96■□□□□ 0.47
SNED1-208ENST00000466618 ZNF397Q8NF99 534 aaPredicted RBP17.96■□□□□ 0.47
SNED1-208ENST00000466618 NRBP1Q9UHY1 535 aa17.96■□□□□ 0.47
SNED1-208ENST00000466618 CAPN2P17655 700 aa17.96■□□□□ 0.46
SNED1-208ENST00000466618 FKBP1AP62942 108 aaKnown RBP17.96■□□□□ 0.46
SNED1-208ENST00000466618 ZSCAN25Q6NSZ9 544 aa17.96■□□□□ 0.46
SNED1-208ENST00000466618 CNTROBQ8N137 903 aa17.96■□□□□ 0.46
SNED1-208ENST00000466618 IL25Q9H293 177 aa17.96■□□□□ 0.46
SNED1-208ENST00000466618 MRVI1Q9Y6F6 885 aa17.96■□□□□ 0.46
SNED1-208ENST00000466618 TRIM6-TRIM34B2RNG4 842 aa17.95■□□□□ 0.46
SNED1-208ENST00000466618 CXCL9Q07325 125 aa17.95■□□□□ 0.46
SNED1-208ENST00000466618 CERS5Q8N5B7 392 aa17.95■□□□□ 0.46
SNED1-208ENST00000466618 TBC1D22AQ8WUA7 517 aa17.95■□□□□ 0.46
SNED1-208ENST00000466618 VIL1P09327 827 aaKnown RBP17.94■□□□□ 0.46
SNED1-208ENST00000466618 HSPA4P34932 840 aa17.94■□□□□ 0.46
SNED1-208ENST00000466618 LUZP1Q86V48 1076 aa17.94■□□□□ 0.46
SNED1-208ENST00000466618 CHD4Q14839 1912 aa17.94■□□□□ 0.46
SNED1-208ENST00000466618 RAD17O75943 681 aa17.94■□□□□ 0.46
SNED1-208ENST00000466618 DNM1Q05193 864 aaKnown RBP17.94■□□□□ 0.46
SNED1-208ENST00000466618 GRIK5Q16478 980 aa17.94■□□□□ 0.46
SNED1-208ENST00000466618 MFSD14BQ5SR56 506 aa17.94■□□□□ 0.46
SNED1-208ENST00000466618 TICAM2Q86XR7 235 aa17.94■□□□□ 0.46
SNED1-208ENST00000466618 RILPL2Q969X0 211 aa17.94■□□□□ 0.46
SNED1-208ENST00000466618 TTC14Q96N46 770 aa17.94■□□□□ 0.46
SNED1-208ENST00000466618 RNF181Q9P0P0 153 aa17.94■□□□□ 0.46
SNED1-208ENST00000466618 SCN9AQ15858 1988 aa17.93■□□□□ 0.46
SNED1-208ENST00000466618 PRDX5P30044 214 aa17.93■□□□□ 0.46
SNED1-208ENST00000466618 C9orf131Q5VYM1 1079 aa17.93■□□□□ 0.46
SNED1-208ENST00000466618 PLA2G4DQ86XP0 818 aa17.93■□□□□ 0.46
SNED1-208ENST00000466618 PLCD3Q8N3E9 789 aa17.93■□□□□ 0.46
SNED1-208ENST00000466618 MXD3Q9BW11 206 aa17.93■□□□□ 0.46
SNED1-208ENST00000466618 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.93■□□□□ 0.46
SNED1-208ENST00000466618 PSMD14O00487 310 aa17.93■□□□□ 0.46
SNED1-208ENST00000466618 CALCOCO1Q9P1Z2 691 aa17.93■□□□□ 0.46
SNED1-208ENST00000466618 ABCF2Q9UG63 623 aa17.93■□□□□ 0.46
SNED1-208ENST00000466618 SUGT1Q9Y2Z0 365 aa17.93■□□□□ 0.46
SNED1-208ENST00000466618 ATP6V1DQ9Y5K8 247 aa17.93■□□□□ 0.46
SNED1-208ENST00000466618 ZNF646O15015 1829 aaPredicted RBP17.92■□□□□ 0.46
SNED1-208ENST00000466618 ERICH4A6NGS2 130 aa17.92■□□□□ 0.46
SNED1-208ENST00000466618 TYRO3Q06418 890 aa17.92■□□□□ 0.46
SNED1-208ENST00000466618 ZNF384Q8TF68 577 aa17.92■□□□□ 0.46
SNED1-208ENST00000466618 GMLQ99445 158 aa17.92■□□□□ 0.46
SNED1-208ENST00000466618 ST7Q9NRC1 585 aa17.92■□□□□ 0.46
SNED1-208ENST00000466618 RFX7Q2KHR2 1363 aa17.92■□□□□ 0.46
SNED1-208ENST00000466618 ZNF75DP51815 510 aa17.91■□□□□ 0.46
SNED1-208ENST00000466618 TPD52L1Q16890 204 aaPredicted RBP17.91■□□□□ 0.46
SNED1-208ENST00000466618 CEP135Q66GS9 1140 aa17.91■□□□□ 0.46
SNED1-208ENST00000466618 CIAPIN1Q6FI81 312 aa17.91■□□□□ 0.46
SNED1-208ENST00000466618 RSBN1LQ6PCB5 846 aaPredicted RBP17.91■□□□□ 0.46
SNED1-208ENST00000466618 FBXO38Q6PIJ6 1188 aa17.91■□□□□ 0.46
SNED1-208ENST00000466618 FSD1Q9BTV5 496 aa17.91■□□□□ 0.46
SNED1-208ENST00000466618 LRP2BPQ9P2M1 347 aa17.91■□□□□ 0.46
SNED1-208ENST00000466618 ZNF215Q9UL58 517 aaPredicted RBP17.91■□□□□ 0.46
SNED1-208ENST00000466618 SBF1O95248 1867 aa17.91■□□□□ 0.46
SNED1-208ENST00000466618 SPTY2D1Q68D10 685 aaPredicted RBP17.91■□□□□ 0.46
SNED1-208ENST00000466618 RUFY3Q7L099 469 aa17.91■□□□□ 0.46
SNED1-208ENST00000466618 CACTINQ8WUQ7 758 aaKnown RBP17.91■□□□□ 0.46
SNED1-208ENST00000466618 FBXW7Q969H0 707 aa17.91■□□□□ 0.46
SNED1-208ENST00000466618 MTMR6Q9Y217 621 aa17.91■□□□□ 0.46
SNED1-208ENST00000466618 ZNF541Q9H0D2 1346 aa17.9■□□□□ 0.46
SNED1-208ENST00000466618 EPB41L2O43491 1005 aaKnown RBP17.9■□□□□ 0.46
SNED1-208ENST00000466618 IDH1O75874 414 aaKnown RBP17.9■□□□□ 0.46
SNED1-208ENST00000466618 CHGBP05060 677 aa17.9■□□□□ 0.46
SNED1-208ENST00000466618 AK2P54819 239 aa17.9■□□□□ 0.46
SNED1-208ENST00000466618 FAM193AP78312 1265 aa17.9■□□□□ 0.46
SNED1-208ENST00000466618 MAP3K12Q12852 859 aa17.9■□□□□ 0.46
SNED1-208ENST00000466618 TNIP1Q15025 636 aa17.9■□□□□ 0.46
SNED1-208ENST00000466618 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.9■□□□□ 0.46
SNED1-208ENST00000466618 NSUN4Q96CB9 384 aaKnown RBP17.9■□□□□ 0.46
SNED1-208ENST00000466618 CBX8Q9HC52 389 aa17.9■□□□□ 0.46
SNED1-208ENST00000466618 LDHBP07195 334 aaKnown RBP17.9■□□□□ 0.46
SNED1-208ENST00000466618 EIF6P56537 245 aaKnown RBP17.9■□□□□ 0.46
SNED1-208ENST00000466618 LARP6Q9BRS8 491 aaKnown RBP17.9■□□□□ 0.46
SNED1-208ENST00000466618 MYO3BQ8WXR4 1341 aa17.89■□□□□ 0.45
SNED1-208ENST00000466618 TCRBV5S4A2TA0A5A2 114 aa17.89■□□□□ 0.45
SNED1-208ENST00000466618 ADD2P35612 726 aa17.89■□□□□ 0.45
SNED1-208ENST00000466618 MECOMQ03112 1051 aa17.89■□□□□ 0.45
SNED1-208ENST00000466618 MAP3K11Q16584 847 aa17.89■□□□□ 0.45
SNED1-208ENST00000466618 SLC9C2Q5TAH2 1124 aa17.89■□□□□ 0.45
SNED1-208ENST00000466618 TMED8Q6PL24 325 aaPredicted RBP17.89■□□□□ 0.45
SNED1-208ENST00000466618 DRC7Q8IY82 874 aa17.89■□□□□ 0.45
SNED1-208ENST00000466618 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.89■□□□□ 0.45
SNED1-208ENST00000466618 SMC3Q9UQE7 1217 aa17.89■□□□□ 0.45
SNED1-208ENST00000466618 V9GYY5 206 aaPredicted RBP17.89■□□□□ 0.45
SNED1-208ENST00000466618 RAD50Q92878 1312 aa17.89■□□□□ 0.45
SNED1-208ENST00000466618 ZC3H4Q9UPT8 1303 aaKnown RBP17.89■□□□□ 0.45
SNED1-208ENST00000466618 LARGE1O95461 756 aa17.89■□□□□ 0.45
SNED1-208ENST00000466618 ZFYP08048 801 aaPredicted RBP17.89■□□□□ 0.45
SNED1-208ENST00000466618 PDE6AP16499 860 aa17.89■□□□□ 0.45
SNED1-208ENST00000466618 CCDC144BQ3MJ40 725 aa17.89■□□□□ 0.45
SNED1-208ENST00000466618 SLFNL1Q499Z3 407 aa17.89■□□□□ 0.45
SNED1-208ENST00000466618 CCDC144CPQ8IYA2 1237 aa17.89■□□□□ 0.45
SNED1-208ENST00000466618 AGBL3Q8NEM8 1001 aa17.89■□□□□ 0.45
SNED1-208ENST00000466618 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms