RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 PCP11498 1178 aaKnown RBP24.82■■□□□ 1.56
PPP1R3F-203ENST00000466508 POLD1P28340 1107 aa24.82■■□□□ 1.56
PPP1R3F-203ENST00000466508 CHRNA5P30532 468 aa24.82■■□□□ 1.56
PPP1R3F-203ENST00000466508 CTR9Q6PD62 1173 aa24.82■■□□□ 1.56
PPP1R3F-203ENST00000466508 CNKSR1Q969H4 720 aa24.82■■□□□ 1.56
PPP1R3F-203ENST00000466508 PTPDC1A2A3K4 754 aa24.81■■□□□ 1.56
PPP1R3F-203ENST00000466508 DHX16O60231 1041 aaKnown RBP24.81■■□□□ 1.56
PPP1R3F-203ENST00000466508 LIFRP42702 1097 aa24.81■■□□□ 1.56
PPP1R3F-203ENST00000466508 PPP4CP60510 307 aa24.81■■□□□ 1.56
PPP1R3F-203ENST00000466508 RRP12Q5JTH9 1297 aaKnown RBP24.81■■□□□ 1.56
PPP1R3F-203ENST00000466508 SGMS1Q86VZ5 419 aa24.81■■□□□ 1.56
PPP1R3F-203ENST00000466508 CERS3Q8IU89 383 aa24.81■■□□□ 1.56
PPP1R3F-203ENST00000466508 MTA3Q9BTC8 594 aa24.81■■□□□ 1.56
PPP1R3F-203ENST00000466508 LY9Q9HBG7 655 aa24.81■■□□□ 1.56
PPP1R3F-203ENST00000466508 TOMM22Q9NS69 142 aa24.81■■□□□ 1.56
PPP1R3F-203ENST00000466508 C10orf71Q711Q0 1435 aa24.81■■□□□ 1.56
PPP1R3F-203ENST00000466508 NAV1Q8NEY1 1877 aa24.81■■□□□ 1.56
PPP1R3F-203ENST00000466508 USP17L12C9JPN9 530 aa24.81■■□□□ 1.56
PPP1R3F-203ENST00000466508 USP17L21D6R901 530 aa24.81■■□□□ 1.56
PPP1R3F-203ENST00000466508 TMEM67Q5HYA8 995 aa24.81■■□□□ 1.56
PPP1R3F-203ENST00000466508 EYA3Q99504 573 aa24.81■■□□□ 1.56
PPP1R3F-203ENST00000466508 NOL10Q9BSC4 688 aaKnown RBP24.81■■□□□ 1.56
PPP1R3F-203ENST00000466508 ARPP21Q9UBL0 812 aaPredicted RBP24.81■■□□□ 1.56
PPP1R3F-203ENST00000466508 KIF3AQ9Y496 699 aa24.81■■□□□ 1.56
PPP1R3F-203ENST00000466508 CDC37L1Q7L3B6 337 aa24.8■■□□□ 1.56
PPP1R3F-203ENST00000466508 FAM184AQ8NB25 1140 aa24.8■■□□□ 1.56
PPP1R3F-203ENST00000466508 DDX11Q96FC9 970 aa24.8■■□□□ 1.56
PPP1R3F-203ENST00000466508 RTFDC1Q9BY42 306 aaPredicted RBP24.8■■□□□ 1.56
PPP1R3F-203ENST00000466508 CYP2D7A0A087X1C5 515 aa24.79■■□□□ 1.56
PPP1R3F-203ENST00000466508 IFIT3O14879 490 aaKnown RBP24.79■■□□□ 1.56
PPP1R3F-203ENST00000466508 PRPF40AO75400 957 aaKnown RBP24.79■■□□□ 1.56
PPP1R3F-203ENST00000466508 GTF2IP78347 998 aa24.79■■□□□ 1.56
PPP1R3F-203ENST00000466508 SART3Q15020 963 aaKnown RBP24.79■■□□□ 1.56
PPP1R3F-203ENST00000466508 SBK1Q52WX2 424 aa24.79■■□□□ 1.56
PPP1R3F-203ENST00000466508 APOA5Q6Q788 366 aa24.79■■□□□ 1.56
PPP1R3F-203ENST00000466508 FGRP09769 529 aa24.79■■□□□ 1.56
PPP1R3F-203ENST00000466508 KLHL40Q2TBA0 621 aa24.79■■□□□ 1.56
PPP1R3F-203ENST00000466508 FOXD4L6Q3SYB3 417 aaPredicted RBP24.79■■□□□ 1.56
PPP1R3F-203ENST00000466508 FOXD4L3Q6VB84 417 aaPredicted RBP24.79■■□□□ 1.56
PPP1R3F-203ENST00000466508 SLF2Q8IX21 1173 aa24.79■■□□□ 1.56
PPP1R3F-203ENST00000466508 STK11IPQ8N1F8 1099 aa24.79■■□□□ 1.56
PPP1R3F-203ENST00000466508 ESR2Q92731 530 aa24.79■■□□□ 1.56
PPP1R3F-203ENST00000466508 SMIM22K7EJ46 135 aa24.78■■□□□ 1.56
PPP1R3F-203ENST00000466508 SH3RF3Q8TEJ3 882 aaPredicted RBP24.78■■□□□ 1.56
PPP1R3F-203ENST00000466508 FAM163AQ96GL9 167 aaPredicted RBP24.78■■□□□ 1.56
PPP1R3F-203ENST00000466508 MKRN1Q9UHC7 482 aaKnown RBP24.78■■□□□ 1.56
PPP1R3F-203ENST00000466508 SUGT1Q9Y2Z0 365 aa24.78■■□□□ 1.56
PPP1R3F-203ENST00000466508 SENP2Q9HC62 589 aa24.77■■□□□ 1.56
PPP1R3F-203ENST00000466508 DDX49Q9Y6V7 483 aaKnown RBP24.77■■□□□ 1.56
PPP1R3F-203ENST00000466508 GPR75-ASB3A0A0A6YYF3 556 aa24.77■■□□□ 1.56
PPP1R3F-203ENST00000466508 NFXL1Q6ZNB6 911 aa24.77■■□□□ 1.56
PPP1R3F-203ENST00000466508 GOLGB1Q14789 3259 aaKnown RBP24.76■■□□□ 1.55
PPP1R3F-203ENST00000466508 GAKO14976 1311 aa24.76■■□□□ 1.55
PPP1R3F-203ENST00000466508 USP5P45974 858 aa24.76■■□□□ 1.55
PPP1R3F-203ENST00000466508 ERICH2A1L162 156 aa24.75■■□□□ 1.55
PPP1R3F-203ENST00000466508 DEKP35659 375 aaKnown RBP24.75■■□□□ 1.55
PPP1R3F-203ENST00000466508 BTDP43251 543 aa24.75■■□□□ 1.55
PPP1R3F-203ENST00000466508 METAP2P50579 478 aaKnown RBP eCLIP24.75■■□□□ 1.55
PPP1R3F-203ENST00000466508 DOK7Q18PE1 504 aa24.75■■□□□ 1.55
PPP1R3F-203ENST00000466508 C7orf43Q8WVR3 580 aa24.75■■□□□ 1.55
PPP1R3F-203ENST00000466508 MCM9Q9NXL9 1143 aa24.75■■□□□ 1.55
PPP1R3F-203ENST00000466508 FOCADQ5VW36 1801 aa24.75■■□□□ 1.55
PPP1R3F-203ENST00000466508 KIF13BQ9NQT8 1826 aa24.75■■□□□ 1.55
PPP1R3F-203ENST00000466508 SNED1Q8TER0 1413 aa24.75■■□□□ 1.55
PPP1R3F-203ENST00000466508 CPLX1O14810 134 aa24.75■■□□□ 1.55
PPP1R3F-203ENST00000466508 ZBTB43O43298 467 aa24.75■■□□□ 1.55
PPP1R3F-203ENST00000466508 SLC3A2P08195 630 aaKnown RBP24.75■■□□□ 1.55
PPP1R3F-203ENST00000466508 RAB11FIP4Q86YS3 637 aa24.75■■□□□ 1.55
PPP1R3F-203ENST00000466508 TMEM87AQ8NBN3 555 aa24.75■■□□□ 1.55
PPP1R3F-203ENST00000466508 UBAC1Q9BSL1 405 aa24.75■■□□□ 1.55
PPP1R3F-203ENST00000466508 FHDC1Q9C0D6 1143 aaPredicted RBP24.75■■□□□ 1.55
PPP1R3F-203ENST00000466508 GZF1Q9H116 711 aaPredicted RBP24.75■■□□□ 1.55
PPP1R3F-203ENST00000466508 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.75■■□□□ 1.55
PPP1R3F-203ENST00000466508 DDX60LQ5H9U9 1706 aaKnown RBP24.74■■□□□ 1.55
PPP1R3F-203ENST00000466508 CCDC69A6NI79 296 aa24.74■■□□□ 1.55
PPP1R3F-203ENST00000466508 G3V3G9 751 aa24.74■■□□□ 1.55
PPP1R3F-203ENST00000466508 H3BQV1 296 aa24.74■■□□□ 1.55
PPP1R3F-203ENST00000466508 ORC4O43929 436 aa24.74■■□□□ 1.55
PPP1R3F-203ENST00000466508 PLCG2P16885 1265 aa24.74■■□□□ 1.55
PPP1R3F-203ENST00000466508 WTAPQ15007 396 aa24.74■■□□□ 1.55
PPP1R3F-203ENST00000466508 DCAF8Q5TAQ9 597 aa24.74■■□□□ 1.55
PPP1R3F-203ENST00000466508 IFFO2Q5TF58 517 aa24.74■■□□□ 1.55
PPP1R3F-203ENST00000466508 PODNQ7Z5L7 613 aa24.74■■□□□ 1.55
PPP1R3F-203ENST00000466508 TMTC2Q8N394 836 aa24.74■■□□□ 1.55
PPP1R3F-203ENST00000466508 ZKSCAN3Q9BRR0 538 aa24.74■■□□□ 1.55
PPP1R3F-203ENST00000466508 SLC12A7Q9Y666 1083 aa24.74■■□□□ 1.55
PPP1R3F-203ENST00000466508 CC2D2BQ6DHV5 1058 aa24.73■■□□□ 1.55
PPP1R3F-203ENST00000466508 FERMT3Q86UX7 667 aa24.73■■□□□ 1.55
PPP1R3F-203ENST00000466508 MICU3Q86XE3 530 aa24.73■■□□□ 1.55
PPP1R3F-203ENST00000466508 NID2Q14112 1375 aa24.73■■□□□ 1.55
PPP1R3F-203ENST00000466508 FDPSP14324 419 aaKnown RBP24.72■■□□□ 1.55
PPP1R3F-203ENST00000466508 FBXW7Q969H0 707 aa24.72■■□□□ 1.55
PPP1R3F-203ENST00000466508 CNPY2Q9Y2B0 182 aa24.72■■□□□ 1.55
PPP1R3F-203ENST00000466508 SCN9AQ15858 1988 aa24.72■■□□□ 1.55
PPP1R3F-203ENST00000466508 USP17L8P0C7I0 530 aa24.72■■□□□ 1.55
PPP1R3F-203ENST00000466508 CYP2D6P10635 497 aa24.72■■□□□ 1.55
PPP1R3F-203ENST00000466508 EVX2Q03828 476 aa24.72■■□□□ 1.55
PPP1R3F-203ENST00000466508 C12orf60Q5U649 245 aa24.72■■□□□ 1.55
PPP1R3F-203ENST00000466508 CERS5Q8N5B7 392 aa24.72■■□□□ 1.55
PPP1R3F-203ENST00000466508 TGFBRAP1Q8WUH2 860 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms