RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 MFSD6Q6ZSS7 791 aa14.37□□□□□ -0.11
VPS16-206ENST00000466415 STOX1Q6ZVD7 989 aa14.37□□□□□ -0.11
VPS16-206ENST00000466415 TBC1D10CQ8IV04 446 aa14.37□□□□□ -0.11
VPS16-206ENST00000466415 GMLQ99445 158 aa14.37□□□□□ -0.11
VPS16-206ENST00000466415 CNNM2Q9H8M5 875 aa14.37□□□□□ -0.11
VPS16-206ENST00000466415 TOMM22Q9NS69 142 aa14.37□□□□□ -0.11
VPS16-206ENST00000466415 RNF181Q9P0P0 153 aa14.37□□□□□ -0.11
VPS16-206ENST00000466415 USP17L12C9JPN9 530 aa14.36□□□□□ -0.11
VPS16-206ENST00000466415 USP17L21D6R901 530 aa14.36□□□□□ -0.11
VPS16-206ENST00000466415 K7ELQ4 463 aaPredicted RBP14.36□□□□□ -0.11
VPS16-206ENST00000466415 CPA1P15085 419 aa14.36□□□□□ -0.11
VPS16-206ENST00000466415 MMP14P50281 582 aa14.36□□□□□ -0.11
VPS16-206ENST00000466415 SBK1Q52WX2 424 aa14.36□□□□□ -0.11
VPS16-206ENST00000466415 AKNAD1Q5T1N1 836 aa14.36□□□□□ -0.11
VPS16-206ENST00000466415 APOBEC3HQ6NTF7 200 aaKnown RBP14.36□□□□□ -0.11
VPS16-206ENST00000466415 CDC42EP5Q6NZY7 148 aa14.36□□□□□ -0.11
VPS16-206ENST00000466415 CTR9Q6PD62 1173 aa14.36□□□□□ -0.11
VPS16-206ENST00000466415 NOL8Q76FK4 1167 aaKnown RBP14.36□□□□□ -0.11
VPS16-206ENST00000466415 STAG1Q8WVM7 1258 aa14.36□□□□□ -0.11
VPS16-206ENST00000466415 KRT23Q9C075 422 aa14.36□□□□□ -0.11
VPS16-206ENST00000466415 SAP30BPQ9UHR5 308 aaKnown RBP14.36□□□□□ -0.11
VPS16-206ENST00000466415 ZNF541Q9H0D2 1346 aa14.36□□□□□ -0.11
VPS16-206ENST00000466415 HSP90AA1P07900 732 aaKnown RBP14.35□□□□□ -0.11
VPS16-206ENST00000466415 ANKRD1Q15327 319 aa14.35□□□□□ -0.11
VPS16-206ENST00000466415 SLC4A8Q2Y0W8 1093 aa14.35□□□□□ -0.11
VPS16-206ENST00000466415 RRP12Q5JTH9 1297 aaKnown RBP14.35□□□□□ -0.11
VPS16-206ENST00000466415 DHX32Q7L7V1 743 aaKnown RBP14.35□□□□□ -0.11
VPS16-206ENST00000466415 STK11IPQ8N1F8 1099 aa14.35□□□□□ -0.11
VPS16-206ENST00000466415 NBPF3Q9H094 633 aa14.35□□□□□ -0.11
VPS16-206ENST00000466415 ANAPC4Q9UJX5 808 aa14.35□□□□□ -0.11
VPS16-206ENST00000466415 NEDD4P46934 1319 aa14.35□□□□□ -0.11
VPS16-206ENST00000466415 CYP2D7A0A087X1C5 515 aa14.34□□□□□ -0.11
VPS16-206ENST00000466415 MYO1BO43795 1136 aa14.34□□□□□ -0.11
VPS16-206ENST00000466415 GRIN3BO60391 1043 aa14.34□□□□□ -0.11
VPS16-206ENST00000466415 CD2BP2O95400 341 aaKnown RBP14.34□□□□□ -0.11
VPS16-206ENST00000466415 PCP11498 1178 aaKnown RBP14.34□□□□□ -0.11
VPS16-206ENST00000466415 MCM5P33992 734 aa14.34□□□□□ -0.11
VPS16-206ENST00000466415 GMPSP49915 693 aaPredicted RBP14.34□□□□□ -0.11
VPS16-206ENST00000466415 AK2P54819 239 aa14.34□□□□□ -0.11
VPS16-206ENST00000466415 PDE4BQ07343 736 aa14.34□□□□□ -0.11
VPS16-206ENST00000466415 TTC14Q96N46 770 aa14.34□□□□□ -0.11
VPS16-206ENST00000466415 PCDHAC2Q9Y5I4 1007 aa14.34□□□□□ -0.11
VPS16-206ENST00000466415 BAZ2AQ9UIF9 1905 aaKnown RBP14.33□□□□□ -0.11
VPS16-206ENST00000466415 DDX60LQ5H9U9 1706 aaKnown RBP14.33□□□□□ -0.12
VPS16-206ENST00000466415 SPDYE2BA6NHP3 402 aa14.33□□□□□ -0.12
VPS16-206ENST00000466415 B4E1Z4 1266 aa14.33□□□□□ -0.12
VPS16-206ENST00000466415 PRC1O43663 620 aa14.33□□□□□ -0.12
VPS16-206ENST00000466415 WDHD1O75717 1129 aaPredicted RBP14.33□□□□□ -0.12
VPS16-206ENST00000466415 HLA-DOAP06340 250 aa14.33□□□□□ -0.12
VPS16-206ENST00000466415 SPDYE6P0CI01 402 aa14.33□□□□□ -0.12
VPS16-206ENST00000466415 CYP2D6P10635 497 aa14.33□□□□□ -0.12
VPS16-206ENST00000466415 SLC4A3P48751 1232 aa14.33□□□□□ -0.12
VPS16-206ENST00000466415 C12orf60Q5U649 245 aa14.33□□□□□ -0.12
VPS16-206ENST00000466415 C9orf131Q5VYM1 1079 aa14.33□□□□□ -0.12
VPS16-206ENST00000466415 Q6ZUG5 572 aa14.33□□□□□ -0.12
VPS16-206ENST00000466415 MB21D2Q8IYB1 491 aaPredicted RBP14.33□□□□□ -0.12
VPS16-206ENST00000466415 DPF2Q92785 391 aa14.33□□□□□ -0.12
VPS16-206ENST00000466415 TCEANC2Q96MN5 208 aa14.33□□□□□ -0.12
VPS16-206ENST00000466415 OSBPL5Q9H0X9 879 aaPredicted RBP14.33□□□□□ -0.12
VPS16-206ENST00000466415 TDRD3Q9H7E2 651 aaKnown RBP14.33□□□□□ -0.12
VPS16-206ENST00000466415 ZNF287Q9HBT7 754 aa14.33□□□□□ -0.12
VPS16-206ENST00000466415 MYOZ2Q9NPC6 264 aa14.33□□□□□ -0.12
VPS16-206ENST00000466415 MKRN1Q9UHC7 482 aaKnown RBP14.33□□□□□ -0.12
VPS16-206ENST00000466415 ROBO3Q96MS0 1386 aa14.33□□□□□ -0.12
VPS16-206ENST00000466415 DICER1Q9UPY3 1922 aaKnown RBP14.33□□□□□ -0.12
VPS16-206ENST00000466415 FOCADQ5VW36 1801 aa14.32□□□□□ -0.12
VPS16-206ENST00000466415 CDK5RAP2Q96SN8 1893 aa14.32□□□□□ -0.12
VPS16-206ENST00000466415 TTC6Q86TZ1 520 aa14.32□□□□□ -0.12
VPS16-206ENST00000466415 MICALL2Q8IY33 904 aa14.32□□□□□ -0.12
VPS16-206ENST00000466415 GPC2Q8N158 579 aa14.32□□□□□ -0.12
VPS16-206ENST00000466415 MTMR14Q8NCE2 650 aa14.32□□□□□ -0.12
VPS16-206ENST00000466415 ESR2Q92731 530 aa14.32□□□□□ -0.12
VPS16-206ENST00000466415 IDI2Q9BXS1 227 aa14.32□□□□□ -0.12
VPS16-206ENST00000466415 ALDH8A1Q9H2A2 487 aaPredicted RBP14.32□□□□□ -0.12
VPS16-206ENST00000466415 WDR19Q8NEZ3 1342 aa14.32□□□□□ -0.12
VPS16-206ENST00000466415 ECM29Q5VYK3 1845 aa14.31□□□□□ -0.12
VPS16-206ENST00000466415 CLRN2A0PK11 232 aa14.31□□□□□ -0.12
VPS16-206ENST00000466415 H7C1D1 291 aa14.31□□□□□ -0.12
VPS16-206ENST00000466415 KDM4AO75164 1064 aa14.31□□□□□ -0.12
VPS16-206ENST00000466415 CACNB3P54284 484 aa14.31□□□□□ -0.12
VPS16-206ENST00000466415 ZNF280AP59817 542 aaPredicted RBP14.31□□□□□ -0.12
VPS16-206ENST00000466415 SART3Q15020 963 aaKnown RBP14.31□□□□□ -0.12
VPS16-206ENST00000466415 CHST3Q7LGC8 479 aa14.31□□□□□ -0.12
VPS16-206ENST00000466415 ZSCAN29Q8IWY8 852 aaPredicted RBP14.31□□□□□ -0.12
VPS16-206ENST00000466415 PRMT6Q96LA8 375 aaPredicted RBP14.31□□□□□ -0.12
VPS16-206ENST00000466415 ZSCAN31Q96LW9 406 aaPredicted RBP14.31□□□□□ -0.12
VPS16-206ENST00000466415 LRRC2Q9BYS8 371 aa14.31□□□□□ -0.12
VPS16-206ENST00000466415 MKNK2Q9HBH9 465 aa14.31□□□□□ -0.12
VPS16-206ENST00000466415 VEZTQ9HBM0 779 aa14.31□□□□□ -0.12
VPS16-206ENST00000466415 DDX4Q9NQI0 724 aaKnown RBP14.31□□□□□ -0.12
VPS16-206ENST00000466415 LIMCH1Q9UPQ0 1083 aa14.31□□□□□ -0.12
VPS16-206ENST00000466415 ERICH2A1L162 156 aa14.3□□□□□ -0.12
VPS16-206ENST00000466415 RANBP6O60518 1105 aaKnown RBP14.3□□□□□ -0.12
VPS16-206ENST00000466415 ENTPD3O75355 529 aa14.3□□□□□ -0.12
VPS16-206ENST00000466415 NPM3O75607 178 aaKnown RBP14.3□□□□□ -0.12
VPS16-206ENST00000466415 LMOD1P29536 600 aaPredicted RBP14.3□□□□□ -0.12
VPS16-206ENST00000466415 NT5C2P49902 561 aa14.3□□□□□ -0.12
VPS16-206ENST00000466415 EXOSC10Q01780 885 aaKnown RBP14.3□□□□□ -0.12
VPS16-206ENST00000466415 TCP10Q12799 353 aa14.3□□□□□ -0.12
VPS16-206ENST00000466415 NFIAQ12857 509 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms