RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 ASB11Q8WXH4 323 aa7.9□□□□□ -1.14
LRCH3-211ENST00000466054 PATL2C9JE40 543 aaKnown RBP7.89□□□□□ -1.15
LRCH3-211ENST00000466054 TMPRSS2O15393 492 aa7.89□□□□□ -1.15
LRCH3-211ENST00000466054 LIG1P18858 919 aa7.89□□□□□ -1.15
LRCH3-211ENST00000466054 SSFA2P28290 1259 aa7.89□□□□□ -1.15
LRCH3-211ENST00000466054 OXCT1P55809 520 aa7.89□□□□□ -1.15
LRCH3-211ENST00000466054 ZP2Q05996 745 aa7.89□□□□□ -1.15
LRCH3-211ENST00000466054 SLAIN2Q9P270 581 aa7.89□□□□□ -1.15
LRCH3-211ENST00000466054 LEFTY1O75610 366 aa7.88□□□□□ -1.15
LRCH3-211ENST00000466054 BUD31P41223 144 aaPredicted RBP7.88□□□□□ -1.15
LRCH3-211ENST00000466054 ECM1Q16610 540 aa7.88□□□□□ -1.15
LRCH3-211ENST00000466054 C1QL4Q86Z23 238 aa7.88□□□□□ -1.15
LRCH3-211ENST00000466054 CILP2Q8IUL8 1156 aa7.88□□□□□ -1.15
LRCH3-211ENST00000466054 FANCD2OSQ96PS1 177 aa7.88□□□□□ -1.15
LRCH3-211ENST00000466054 DUSP23Q9BVJ7 150 aa7.88□□□□□ -1.15
LRCH3-211ENST00000466054 FAM13AO94988 1023 aa7.87□□□□□ -1.15
LRCH3-211ENST00000466054 KCNA1Q09470 495 aa7.87□□□□□ -1.15
LRCH3-211ENST00000466054 MTMR3Q13615 1198 aa7.87□□□□□ -1.15
LRCH3-211ENST00000466054 TCF12Q99081 682 aa7.87□□□□□ -1.15
LRCH3-211ENST00000466054 ZC3H12CQ9C0D7 883 aaKnown RBP7.87□□□□□ -1.15
LRCH3-211ENST00000466054 PCOLCE2Q9UKZ9 415 aa7.87□□□□□ -1.15
LRCH3-211ENST00000466054 SNX11Q9Y5W9 270 aa7.87□□□□□ -1.15
LRCH3-211ENST00000466054 U3KQE9 123 aa7.87□□□□□ -1.15
LRCH3-211ENST00000466054 HCLS1P14317 486 aaPredicted RBP7.86□□□□□ -1.15
LRCH3-211ENST00000466054 TMEM67Q5HYA8 995 aa7.86□□□□□ -1.15
LRCH3-211ENST00000466054 TOP6BLQ8N6T0 577 aa7.86□□□□□ -1.15
LRCH3-211ENST00000466054 EHD4Q9H223 541 aa7.86□□□□□ -1.15
LRCH3-211ENST00000466054 ZNF576Q9H609 170 aa7.86□□□□□ -1.15
LRCH3-211ENST00000466054 PLAGL2Q9UPG8 496 aa7.86□□□□□ -1.15
LRCH3-211ENST00000466054 CTNND2Q9UQB3 1225 aa7.86□□□□□ -1.15
LRCH3-211ENST00000466054 GLI1P08151 1106 aa7.85□□□□□ -1.15
LRCH3-211ENST00000466054 TTLL4Q14679 1199 aa7.85□□□□□ -1.15
LRCH3-211ENST00000466054 PHLDB3Q6NSJ2 640 aa7.85□□□□□ -1.15
LRCH3-211ENST00000466054 PRR23BQ6ZRT6 265 aa7.85□□□□□ -1.15
LRCH3-211ENST00000466054 TTLL10Q6ZVT0 673 aa7.85□□□□□ -1.15
LRCH3-211ENST00000466054 GALNT12Q8IXK2 581 aa7.85□□□□□ -1.15
LRCH3-211ENST00000466054 KIRREL1Q96J84 757 aa7.85□□□□□ -1.15
LRCH3-211ENST00000466054 MTMR7Q9Y216 660 aa7.85□□□□□ -1.15
LRCH3-211ENST00000466054 C1QTNF9P0C862 333 aa7.84□□□□□ -1.15
LRCH3-211ENST00000466054 CCDC86Q9H6F5 360 aaKnown RBP7.84□□□□□ -1.15
LRCH3-211ENST00000466054 GTF2IRD1Q9UHL9 959 aa7.84□□□□□ -1.15
LRCH3-211ENST00000466054 RAPGEFL1Q9UHV5 662 aa7.84□□□□□ -1.15
LRCH3-211ENST00000466054 TMEM253P0C7T8 217 aa7.83□□□□□ -1.16
LRCH3-211ENST00000466054 CYFIP1Q7L576 1253 aa7.83□□□□□ -1.16
LRCH3-211ENST00000466054 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.83□□□□□ -1.16
LRCH3-211ENST00000466054 FBXO15Q8NCQ5 510 aaPredicted RBP7.83□□□□□ -1.16
LRCH3-211ENST00000466054 WDR89Q96FK6 387 aaPredicted RBP7.83□□□□□ -1.16
LRCH3-211ENST00000466054 DISC1Q9NRI5 854 aa7.83□□□□□ -1.16
LRCH3-211ENST00000466054 NPIPB6E9PJ23 425 aa7.82□□□□□ -1.16
LRCH3-211ENST00000466054 CTSWP56202 376 aa7.82□□□□□ -1.16
LRCH3-211ENST00000466054 FYB2Q5VWT5 728 aa7.82□□□□□ -1.16
LRCH3-211ENST00000466054 DIRC2Q96SL1 478 aa7.82□□□□□ -1.16
LRCH3-211ENST00000466054 TNKS2Q9H2K2 1166 aa7.82□□□□□ -1.16
LRCH3-211ENST00000466054 GNEQ9Y223 722 aaKnown RBP7.82□□□□□ -1.16
LRCH3-211ENST00000466054 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.81□□□□□ -1.16
LRCH3-211ENST00000466054 NEFLP07196 543 aa7.81□□□□□ -1.16
LRCH3-211ENST00000466054 INHBBP09529 407 aa7.81□□□□□ -1.16
LRCH3-211ENST00000466054 CIAPIN1Q6FI81 312 aa7.81□□□□□ -1.16
LRCH3-211ENST00000466054 TXNDC2Q86VQ3 553 aa7.81□□□□□ -1.16
LRCH3-211ENST00000466054 AEBP1Q8IUX7 1158 aa7.81□□□□□ -1.16
LRCH3-211ENST00000466054 GJD3Q8N144 294 aa7.81□□□□□ -1.16
LRCH3-211ENST00000466054 NSUN3Q9H649 340 aaKnown RBP7.81□□□□□ -1.16
LRCH3-211ENST00000466054 GNAT3A8MTJ3 354 aa7.8□□□□□ -1.16
LRCH3-211ENST00000466054 ITPKAP23677 461 aa7.8□□□□□ -1.16
LRCH3-211ENST00000466054 ZNF157P51786 506 aaPredicted RBP7.8□□□□□ -1.16
LRCH3-211ENST00000466054 KIAA0319Q5VV43 1072 aa7.8□□□□□ -1.16
LRCH3-211ENST00000466054 ZBTB7CA1YPR0 619 aa7.79□□□□□ -1.16
LRCH3-211ENST00000466054 FZD6O60353 706 aa7.79□□□□□ -1.16
LRCH3-211ENST00000466054 KIF4BQ2VIQ3 1234 aa7.79□□□□□ -1.16
LRCH3-211ENST00000466054 KCNB2Q92953 911 aa7.79□□□□□ -1.16
LRCH3-211ENST00000466054 KRT82Q9NSB4 513 aa7.79□□□□□ -1.16
LRCH3-211ENST00000466054 CCDC87Q9NVE4 849 aa7.79□□□□□ -1.16
LRCH3-211ENST00000466054 TCAF2A6NFQ2 919 aa7.78□□□□□ -1.16
LRCH3-211ENST00000466054 ZNF862O60290 1169 aa7.78□□□□□ -1.16
LRCH3-211ENST00000466054 GSTP1P09211 210 aaKnown RBP7.78□□□□□ -1.16
LRCH3-211ENST00000466054 SF3B2Q13435 895 aaKnown RBP7.78□□□□□ -1.16
LRCH3-211ENST00000466054 ISL2Q96A47 359 aa7.78□□□□□ -1.16
LRCH3-211ENST00000466054 NPR3P17342 541 aa7.77□□□□□ -1.17
LRCH3-211ENST00000466054 PTPN12Q05209 780 aaKnown RBP7.77□□□□□ -1.17
LRCH3-211ENST00000466054 KCNA10Q16322 511 aa7.77□□□□□ -1.17
LRCH3-211ENST00000466054 RPS26P11Q5JNZ5 115 aaPredicted RBP7.77□□□□□ -1.17
LRCH3-211ENST00000466054 AMIGO3Q86WK7 504 aa7.77□□□□□ -1.17
LRCH3-211ENST00000466054 EGFL7Q9UHF1 273 aa7.77□□□□□ -1.17
LRCH3-211ENST00000466054 ABL1P00519 1130 aa7.76□□□□□ -1.17
LRCH3-211ENST00000466054 CLCN7P51798 805 aa7.76□□□□□ -1.17
LRCH3-211ENST00000466054 PPP2R3AQ06190 1150 aa7.76□□□□□ -1.17
LRCH3-211ENST00000466054 SPACA3Q8IXA5 215 aa7.76□□□□□ -1.17
LRCH3-211ENST00000466054 HEXIM2Q96MH2 286 aaKnown RBP7.76□□□□□ -1.17
LRCH3-211ENST00000466054 DCP1AQ9NPI6 582 aaPredicted RBP7.76□□□□□ -1.17
LRCH3-211ENST00000466054 PICK1Q9NRD5 415 aa7.76□□□□□ -1.17
LRCH3-211ENST00000466054 IGF2BP3O00425 579 aaKnown RBP eCLIP7.75□□□□□ -1.17
LRCH3-211ENST00000466054 FKBP4Q02790 459 aaKnown RBP eCLIP7.75□□□□□ -1.17
LRCH3-211ENST00000466054 USPL1Q5W0Q7 1092 aa7.75□□□□□ -1.17
LRCH3-211ENST00000466054 EPB41L4BQ9H329 900 aa7.75□□□□□ -1.17
LRCH3-211ENST00000466054 CARS2Q9HA77 564 aaKnown RBP7.75□□□□□ -1.17
LRCH3-211ENST00000466054 IVNS1ABPQ9Y6Y0 642 aa7.75□□□□□ -1.17
LRCH3-211ENST00000466054 NUAK1O60285 661 aa7.74□□□□□ -1.17
LRCH3-211ENST00000466054 GADD45BO75293 160 aaPredicted RBP7.74□□□□□ -1.17
LRCH3-211ENST00000466054 NEFMP07197 916 aa7.74□□□□□ -1.17
LRCH3-211ENST00000466054 ATG14Q6ZNE5 492 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms