RNA–Protein interactions for RNA: ENST00000465941.1

HOXA9-203, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-203ENST00000465941 SH3BP5LQ7L8J4 393 aa22.17■■□□□ 1.14
HOXA9-203ENST00000465941 OSBP2Q969R2 916 aa22.17■■□□□ 1.14
HOXA9-203ENST00000465941 RILPL2Q969X0 211 aa22.17■■□□□ 1.14
HOXA9-203ENST00000465941 HHIPL1Q96JK4 782 aa22.17■■□□□ 1.14
HOXA9-203ENST00000465941 OSBPL5Q9H0X9 879 aaPredicted RBP22.17■■□□□ 1.14
HOXA9-203ENST00000465941 ATRNL1Q5VV63 1379 aa22.16■■□□□ 1.14
HOXA9-203ENST00000465941 MBD4O95243 580 aa22.16■■□□□ 1.14
HOXA9-203ENST00000465941 MAP3K11Q16584 847 aa22.16■■□□□ 1.14
HOXA9-203ENST00000465941 ARMC9Q7Z3E5 817 aa22.16■■□□□ 1.14
HOXA9-203ENST00000465941 LCORLQ8N3X6 602 aa22.16■■□□□ 1.14
HOXA9-203ENST00000465941 AIDAQ96BJ3 306 aa22.16■■□□□ 1.14
HOXA9-203ENST00000465941 CRNKL1Q9BZJ0 848 aaKnown RBP22.16■■□□□ 1.14
HOXA9-203ENST00000465941 FLT1P17948 1338 aa22.15■■□□□ 1.14
HOXA9-203ENST00000465941 DDTLA6NHG4 134 aaPredicted RBP22.15■■□□□ 1.14
HOXA9-203ENST00000465941 RASSF10A6NK89 507 aa22.15■■□□□ 1.14
HOXA9-203ENST00000465941 USP2O75604 605 aaPredicted RBP22.15■■□□□ 1.14
HOXA9-203ENST00000465941 USP5P45974 858 aa22.15■■□□□ 1.14
HOXA9-203ENST00000465941 TTLL12Q14166 644 aaPredicted RBP22.15■■□□□ 1.14
HOXA9-203ENST00000465941 ZMYM1Q5SVZ6 1142 aa22.15■■□□□ 1.14
HOXA9-203ENST00000465941 MOB2Q70IA6 237 aa22.15■■□□□ 1.14
HOXA9-203ENST00000465941 MAPKAPK5Q8IW41 473 aa22.15■■□□□ 1.14
HOXA9-203ENST00000465941 ZSCAN29Q8IWY8 852 aaPredicted RBP22.15■■□□□ 1.14
HOXA9-203ENST00000465941 DHX36Q9H2U1 1008 aaKnown RBP22.15■■□□□ 1.14
HOXA9-203ENST00000465941 ARMT1Q9H993 441 aa22.15■■□□□ 1.14
HOXA9-203ENST00000465941 COL2A1P02458 1487 aaPredicted RBP22.15■■□□□ 1.14
HOXA9-203ENST00000465941 UNCXA6NJT0 531 aa22.14■■□□□ 1.13
HOXA9-203ENST00000465941 GSPT1P15170 499 aaKnown RBP22.14■■□□□ 1.13
HOXA9-203ENST00000465941 HUNKP57058 714 aa22.14■■□□□ 1.13
HOXA9-203ENST00000465941 MAP3K10Q02779 954 aa22.14■■□□□ 1.13
HOXA9-203ENST00000465941 PRKG1Q13976 671 aa22.14■■□□□ 1.13
HOXA9-203ENST00000465941 DEFB115Q30KQ5 88 aa22.14■■□□□ 1.13
HOXA9-203ENST00000465941 CSRNP1Q96S65 589 aa22.14■■□□□ 1.13
HOXA9-203ENST00000465941 STRBPQ96SI9 672 aaKnown RBP22.14■■□□□ 1.13
HOXA9-203ENST00000465941 MKRN1Q9UHC7 482 aaKnown RBP22.14■■□□□ 1.13
HOXA9-203ENST00000465941 ANGEL1Q9UNK9 670 aaKnown RBP22.14■■□□□ 1.13
HOXA9-203ENST00000465941 PAPPA2Q9BXP8 1791 aa22.14■■□□□ 1.13
HOXA9-203ENST00000465941 UBE2Q2LH0YL09 131 aa22.13■■□□□ 1.13
HOXA9-203ENST00000465941 LDLRAD1Q5T700 205 aa22.13■■□□□ 1.13
HOXA9-203ENST00000465941 DCAF15Q66K64 600 aa22.13■■□□□ 1.13
HOXA9-203ENST00000465941 ATP8A2Q9NTI2 1148 aa22.13■■□□□ 1.13
HOXA9-203ENST00000465941 FZD1Q9UP38 647 aa22.13■■□□□ 1.13
HOXA9-203ENST00000465941 MYH7P12883 1935 aa22.12■■□□□ 1.13
HOXA9-203ENST00000465941 SDSP20132 328 aa22.12■■□□□ 1.13
HOXA9-203ENST00000465941 IREB2P48200 963 aaKnown RBP22.12■■□□□ 1.13
HOXA9-203ENST00000465941 MIGA2Q7L4E1 593 aa22.12■■□□□ 1.13
HOXA9-203ENST00000465941 DNAJC5GQ8N7S2 189 aa22.12■■□□□ 1.13
HOXA9-203ENST00000465941 KLRG1Q96E93 195 aa22.12■■□□□ 1.13
HOXA9-203ENST00000465941 M0R2C6 588 aa22.11■■□□□ 1.13
HOXA9-203ENST00000465941 TBC1D12O60347 775 aa22.11■■□□□ 1.13
HOXA9-203ENST00000465941 SEC62Q99442 399 aaKnown RBP22.11■■□□□ 1.13
HOXA9-203ENST00000465941 DCP1AQ9NPI6 582 aaPredicted RBP22.11■■□□□ 1.13
HOXA9-203ENST00000465941 HELLSQ9NRZ9 838 aa22.11■■□□□ 1.13
HOXA9-203ENST00000465941 PI4KBQ9UBF8 816 aa22.11■■□□□ 1.13
HOXA9-203ENST00000465941 PALD1Q9ULE6 856 aa22.11■■□□□ 1.13
HOXA9-203ENST00000465941 SLC4A4Q9Y6R1 1079 aa22.11■■□□□ 1.13
HOXA9-203ENST00000465941 GPAA1O43292 621 aa22.1■■□□□ 1.13
HOXA9-203ENST00000465941 PRKAB2O43741 272 aa22.1■■□□□ 1.13
HOXA9-203ENST00000465941 GNAT2P19087 354 aa22.1■■□□□ 1.13
HOXA9-203ENST00000465941 RGMBQ6NW40 437 aa22.1■■□□□ 1.13
HOXA9-203ENST00000465941 SKAP1Q86WV1 359 aa22.1■■□□□ 1.13
HOXA9-203ENST00000465941 SDR42E1Q8WUS8 393 aa22.1■■□□□ 1.13
HOXA9-203ENST00000465941 ZNF341Q9BYN7 854 aa22.1■■□□□ 1.13
HOXA9-203ENST00000465941 HIP1O00291 1037 aa22.09■■□□□ 1.13
HOXA9-203ENST00000465941 METTL16Q86W50 562 aaKnown RBP22.09■■□□□ 1.13
HOXA9-203ENST00000465941 FOXP4Q8IVH2 680 aaPredicted RBP22.09■■□□□ 1.13
HOXA9-203ENST00000465941 ANKRD13AQ8IZ07 590 aa22.09■■□□□ 1.13
HOXA9-203ENST00000465941 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.09■■□□□ 1.13
HOXA9-203ENST00000465941 SAP30BPQ9UHR5 308 aaKnown RBP22.09■■□□□ 1.13
HOXA9-203ENST00000465941 ZNF112Q9UJU3 913 aa22.09■■□□□ 1.13
HOXA9-203ENST00000465941 MAP3K9P80192 1104 aa22.08■■□□□ 1.13
HOXA9-203ENST00000465941 MCMDC2Q4G0Z9 681 aa22.08■■□□□ 1.13
HOXA9-203ENST00000465941 GIMAP6Q6P9H5 292 aa22.08■■□□□ 1.13
HOXA9-203ENST00000465941 TTC6Q86TZ1 520 aa22.08■■□□□ 1.13
HOXA9-203ENST00000465941 FAM227BQ96M60 508 aa22.08■■□□□ 1.13
HOXA9-203ENST00000465941 MCM9Q9NXL9 1143 aa22.08■■□□□ 1.13
HOXA9-203ENST00000465941 HERC5Q9UII4 1024 aaKnown RBP22.08■■□□□ 1.13
HOXA9-203ENST00000465941 FOCADQ5VW36 1801 aa22.08■■□□□ 1.12
HOXA9-203ENST00000465941 GSG1L2A8MUP6 293 aa22.07■■□□□ 1.12
HOXA9-203ENST00000465941 PATL2C9JE40 543 aaKnown RBP22.07■■□□□ 1.12
HOXA9-203ENST00000465941 HLA-DOAP06340 250 aa22.07■■□□□ 1.12
HOXA9-203ENST00000465941 ECE1P42892 770 aa22.07■■□□□ 1.12
HOXA9-203ENST00000465941 ZNF157P51786 506 aaPredicted RBP22.07■■□□□ 1.12
HOXA9-203ENST00000465941 NMIQ13287 307 aaPredicted RBP22.07■■□□□ 1.12
HOXA9-203ENST00000465941 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.07■■□□□ 1.12
HOXA9-203ENST00000465941 CCDC102AQ96A19 550 aa22.07■■□□□ 1.12
HOXA9-203ENST00000465941 DDRGK1Q96HY6 314 aa22.07■■□□□ 1.12
HOXA9-203ENST00000465941 WRNIP1Q96S55 665 aa22.07■■□□□ 1.12
HOXA9-203ENST00000465941 CDK5RAP2Q96SN8 1893 aa22.07■■□□□ 1.12
HOXA9-203ENST00000465941 A0A0D9SFI3 127 aa22.06■■□□□ 1.12
HOXA9-203ENST00000465941 PHF20L1A8MW92 1017 aa22.06■■□□□ 1.12
HOXA9-203ENST00000465941 POLR3DP05423 398 aaPredicted RBP22.06■■□□□ 1.12
HOXA9-203ENST00000465941 VEGFBP49765 207 aa22.06■■□□□ 1.12
HOXA9-203ENST00000465941 CYP4F22Q6NT55 531 aa22.06■■□□□ 1.12
HOXA9-203ENST00000465941 SLC10A4Q96EP9 437 aa22.06■■□□□ 1.12
HOXA9-203ENST00000465941 CAPNS2Q96L46 248 aa22.06■■□□□ 1.12
HOXA9-203ENST00000465941 EHD4Q9H223 541 aa22.06■■□□□ 1.12
HOXA9-203ENST00000465941 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.06■■□□□ 1.12
HOXA9-203ENST00000465941 DIAPH3Q9NSV4 1193 aa22.06■■□□□ 1.12
HOXA9-203ENST00000465941 BMP2KLQ5H9B9 411 aa22.05■■□□□ 1.12
HOXA9-203ENST00000465941 CLMNQ96JQ2 1002 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms