RNA–Protein interactions for RNA: ENST00000465934.1

CACNA1C-224, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-224ENST00000465934 CCDC8Q9H0W5 538 aaPredicted RBP17.27■□□□□ 0.36
CACNA1C-224ENST00000465934 EXOC6BQ9Y2D4 811 aa17.27■□□□□ 0.36
CACNA1C-224ENST00000465934 COG6Q9Y2V7 657 aa17.27■□□□□ 0.36
CACNA1C-224ENST00000465934 BTBD19C9JJ37 291 aa17.26■□□□□ 0.35
CACNA1C-224ENST00000465934 CYP2E1P05181 493 aaPredicted RBP17.26■□□□□ 0.35
CACNA1C-224ENST00000465934 RGS19P49795 217 aa17.26■□□□□ 0.35
CACNA1C-224ENST00000465934 SNAPC2Q13487 334 aa17.26■□□□□ 0.35
CACNA1C-224ENST00000465934 PKN2Q16513 984 aaKnown RBP17.26■□□□□ 0.35
CACNA1C-224ENST00000465934 CCDC158Q5M9N0 1113 aa17.26■□□□□ 0.35
CACNA1C-224ENST00000465934 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.26■□□□□ 0.35
CACNA1C-224ENST00000465934 CD99L2Q8TCZ2 262 aa17.26■□□□□ 0.35
CACNA1C-224ENST00000465934 LRP2BPQ9P2M1 347 aa17.26■□□□□ 0.35
CACNA1C-224ENST00000465934 RCAN3Q9UKA8 241 aa17.26■□□□□ 0.35
CACNA1C-224ENST00000465934 PHF20L1A8MW92 1017 aa17.25■□□□□ 0.35
CACNA1C-224ENST00000465934 CETPP11597 493 aa17.25■□□□□ 0.35
CACNA1C-224ENST00000465934 ZAP70P43403 619 aa17.25■□□□□ 0.35
CACNA1C-224ENST00000465934 GSTO1P78417 241 aa17.25■□□□□ 0.35
CACNA1C-224ENST00000465934 PPATQ06203 517 aa17.25■□□□□ 0.35
CACNA1C-224ENST00000465934 TAF1CQ15572 869 aaPredicted RBP17.25■□□□□ 0.35
CACNA1C-224ENST00000465934 NOL9Q5SY16 702 aaKnown RBP17.25■□□□□ 0.35
CACNA1C-224ENST00000465934 FBXO46Q6PJ61 603 aaPredicted RBP17.25■□□□□ 0.35
CACNA1C-224ENST00000465934 OTOP1Q7RTM1 612 aa17.25■□□□□ 0.35
CACNA1C-224ENST00000465934 TRIM17Q9Y577 477 aa17.25■□□□□ 0.35
CACNA1C-224ENST00000465934 MYH2Q9UKX2 1941 aa17.25■□□□□ 0.35
CACNA1C-224ENST00000465934 CENPFP49454 3210 aa17.24■□□□□ 0.35
CACNA1C-224ENST00000465934 FAM196BA6NMK8 535 aa17.24■□□□□ 0.35
CACNA1C-224ENST00000465934 ADGRA1Q86SQ6 560 aa17.24■□□□□ 0.35
CACNA1C-224ENST00000465934 PIH1D3Q9NQM4 214 aaKnown RBP17.24■□□□□ 0.35
CACNA1C-224ENST00000465934 NDUFB9Q9Y6M9 179 aa17.24■□□□□ 0.35
CACNA1C-224ENST00000465934 LDHCP07864 332 aa17.23■□□□□ 0.35
CACNA1C-224ENST00000465934 SP3Q02447 781 aa17.23■□□□□ 0.35
CACNA1C-224ENST00000465934 MLLT1Q03111 559 aaPredicted RBP17.23■□□□□ 0.35
CACNA1C-224ENST00000465934 C20orf194Q5TEA3 1177 aa17.23■□□□□ 0.35
CACNA1C-224ENST00000465934 SIRT2Q8IXJ6 389 aa17.23■□□□□ 0.35
CACNA1C-224ENST00000465934 SH3RF3Q8TEJ3 882 aaPredicted RBP17.23■□□□□ 0.35
CACNA1C-224ENST00000465934 ZNF512BQ96KM6 892 aaPredicted RBP17.23■□□□□ 0.35
CACNA1C-224ENST00000465934 ZFYVE28Q9HCC9 887 aa17.23■□□□□ 0.35
CACNA1C-224ENST00000465934 ZBTB40Q9NUA8 1239 aa17.23■□□□□ 0.35
CACNA1C-224ENST00000465934 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.23■□□□□ 0.35
CACNA1C-224ENST00000465934 MS4A1P11836 297 aa17.22■□□□□ 0.35
CACNA1C-224ENST00000465934 MAP3K10Q02779 954 aa17.22■□□□□ 0.35
CACNA1C-224ENST00000465934 MOGSQ13724 837 aa17.22■□□□□ 0.35
CACNA1C-224ENST00000465934 NAA16Q6N069 864 aaPredicted RBP17.22■□□□□ 0.35
CACNA1C-224ENST00000465934 AACSQ86V21 672 aa17.22■□□□□ 0.35
CACNA1C-224ENST00000465934 TEX11Q8IYF3 940 aa17.22■□□□□ 0.35
CACNA1C-224ENST00000465934 ERO1AQ96HE7 468 aa17.22■□□□□ 0.35
CACNA1C-224ENST00000465934 IL1RAPL2Q9NP60 686 aa17.22■□□□□ 0.35
CACNA1C-224ENST00000465934 AATFQ9NY61 560 aaKnown RBP eCLIP17.22■□□□□ 0.35
CACNA1C-224ENST00000465934 KCNH4Q9UQ05 1017 aa17.22■□□□□ 0.35
CACNA1C-224ENST00000465934 APBB1O00213 710 aa17.21■□□□□ 0.35
CACNA1C-224ENST00000465934 CCDC84Q86UT8 332 aaPredicted RBP17.21■□□□□ 0.35
CACNA1C-224ENST00000465934 SCYL3Q8IZE3 742 aa17.21■□□□□ 0.35
CACNA1C-224ENST00000465934 OSBPL5Q9H0X9 879 aaPredicted RBP17.21■□□□□ 0.35
CACNA1C-224ENST00000465934 DDX19BQ9UMR2 479 aa17.21■□□□□ 0.35
CACNA1C-224ENST00000465934 NPM3O75607 178 aaKnown RBP17.2■□□□□ 0.34
CACNA1C-224ENST00000465934 PTPRAP18433 802 aa17.2■□□□□ 0.34
CACNA1C-224ENST00000465934 ERC1Q8IUD2 1116 aa17.2■□□□□ 0.34
CACNA1C-224ENST00000465934 ANTXR1Q9H6X2 564 aa17.2■□□□□ 0.34
CACNA1C-224ENST00000465934 EFCC1Q9HA90 598 aa17.2■□□□□ 0.34
CACNA1C-224ENST00000465934 PICK1Q9NRD5 415 aa17.2■□□□□ 0.34
CACNA1C-224ENST00000465934 ZHX2Q9Y6X8 837 aa17.2■□□□□ 0.34
CACNA1C-224ENST00000465934 TNRC18O15417 2968 aaPredicted RBP17.19■□□□□ 0.34
CACNA1C-224ENST00000465934 PDHXO00330 501 aa17.19■□□□□ 0.34
CACNA1C-224ENST00000465934 TLR2O60603 784 aa17.19■□□□□ 0.34
CACNA1C-224ENST00000465934 RHPN1Q8TCX5 695 aa17.19■□□□□ 0.34
CACNA1C-224ENST00000465934 ARHGAP39Q9C0H5 1083 aa17.19■□□□□ 0.34
CACNA1C-224ENST00000465934 BCL11AQ9H165 835 aa17.19■□□□□ 0.34
CACNA1C-224ENST00000465934 ZCCHC17Q9NP64 241 aaKnown RBP17.19■□□□□ 0.34
CACNA1C-224ENST00000465934 PTPN22Q9Y2R2 807 aa17.19■□□□□ 0.34
CACNA1C-224ENST00000465934 DOCK2Q92608 1830 aa17.19■□□□□ 0.34
CACNA1C-224ENST00000465934 IDH1O75874 414 aaKnown RBP17.18■□□□□ 0.34
CACNA1C-224ENST00000465934 ECM2O94769 699 aaPredicted RBP17.18■□□□□ 0.34
CACNA1C-224ENST00000465934 MAP4K4O95819 1239 aaPredicted RBP17.18■□□□□ 0.34
CACNA1C-224ENST00000465934 DYNLL1P63167 89 aaKnown RBP17.18■□□□□ 0.34
CACNA1C-224ENST00000465934 RRP1BQ14684 758 aaKnown RBP17.18■□□□□ 0.34
CACNA1C-224ENST00000465934 GPAT2Q6NUI2 795 aa17.18■□□□□ 0.34
CACNA1C-224ENST00000465934 ANKRD23Q86SG2 305 aa17.18■□□□□ 0.34
CACNA1C-224ENST00000465934 MAPKAPK5Q8IW41 473 aa17.18■□□□□ 0.34
CACNA1C-224ENST00000465934 TGFBRAP1Q8WUH2 860 aa17.18■□□□□ 0.34
CACNA1C-224ENST00000465934 NOL10Q9BSC4 688 aaKnown RBP17.18■□□□□ 0.34
CACNA1C-224ENST00000465934 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.18■□□□□ 0.34
CACNA1C-224ENST00000465934 AFG3L2Q9Y4W6 797 aa17.18■□□□□ 0.34
CACNA1C-224ENST00000465934 BRCA2P51587 3418 aa17.18■□□□□ 0.34
CACNA1C-224ENST00000465934 CXCL11O14625 94 aa17.17■□□□□ 0.34
CACNA1C-224ENST00000465934 TBC1D12O60347 775 aa17.17■□□□□ 0.34
CACNA1C-224ENST00000465934 CTNND1O60716 968 aaKnown RBP17.17■□□□□ 0.34
CACNA1C-224ENST00000465934 BAG3O95817 575 aa17.17■□□□□ 0.34
CACNA1C-224ENST00000465934 CYP7A1P22680 504 aa17.17■□□□□ 0.34
CACNA1C-224ENST00000465934 PPP4CP60510 307 aa17.17■□□□□ 0.34
CACNA1C-224ENST00000465934 RPAP2Q8IXW5 612 aaPredicted RBP17.17■□□□□ 0.34
CACNA1C-224ENST00000465934 CPA4Q9UI42 421 aa17.17■□□□□ 0.34
CACNA1C-224ENST00000465934 COL2A1P02458 1487 aaPredicted RBP17.17■□□□□ 0.34
CACNA1C-224ENST00000465934 FLT1P17948 1338 aa17.17■□□□□ 0.34
CACNA1C-224ENST00000465934 AK9Q5TCS8 1911 aa17.16■□□□□ 0.34
CACNA1C-224ENST00000465934 MAST2Q6P0Q8 1798 aa17.16■□□□□ 0.34
CACNA1C-224ENST00000465934 A0A0G2JLL6 359 aaPredicted RBP17.16■□□□□ 0.34
CACNA1C-224ENST00000465934 TRIM75PA6NK02 468 aa17.16■□□□□ 0.34
CACNA1C-224ENST00000465934 HSP90AB4PQ58FF6 505 aa17.16■□□□□ 0.34
CACNA1C-224ENST00000465934 C17orf99Q6UX52 265 aa17.16■□□□□ 0.34
CACNA1C-224ENST00000465934 PRRT2Q7Z6L0 340 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms