RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 CYP21A2P08686 494 aa20.51■□□□□ 0.87
PTPRU-206ENST00000465525 KIF4BQ2VIQ3 1234 aa20.51■□□□□ 0.87
PTPRU-206ENST00000465525 NBPF9Q3BBW0 867 aa20.51■□□□□ 0.87
PTPRU-206ENST00000465525 STK11IPQ8N1F8 1099 aa20.51■□□□□ 0.87
PTPRU-206ENST00000465525 SNX14Q9Y5W7 946 aa20.51■□□□□ 0.87
PTPRU-206ENST00000465525 FLT1P17948 1338 aa20.51■□□□□ 0.87
PTPRU-206ENST00000465525 WNT10BO00744 389 aa20.51■□□□□ 0.87
PTPRU-206ENST00000465525 CYP2D6P10635 497 aa20.51■□□□□ 0.87
PTPRU-206ENST00000465525 VEGFAP15692 232 aaPredicted RBP20.51■□□□□ 0.87
PTPRU-206ENST00000465525 EPHX2P34913 555 aa20.51■□□□□ 0.87
PTPRU-206ENST00000465525 NFIAQ12857 509 aa20.51■□□□□ 0.87
PTPRU-206ENST00000465525 ALX1Q15699 326 aa20.51■□□□□ 0.87
PTPRU-206ENST00000465525 ATP8A2Q9NTI2 1148 aa20.51■□□□□ 0.87
PTPRU-206ENST00000465525 CTNNA3Q9UI47 895 aa20.51■□□□□ 0.87
PTPRU-206ENST00000465525 SCN4AP35499 1836 aa20.5■□□□□ 0.87
PTPRU-206ENST00000465525 MINDY4BA8MYZ0 360 aa20.5■□□□□ 0.87
PTPRU-206ENST00000465525 MYO1BO43795 1136 aa20.5■□□□□ 0.87
PTPRU-206ENST00000465525 USP50Q70EL3 339 aaPredicted RBP20.5■□□□□ 0.87
PTPRU-206ENST00000465525 KIF2CQ99661 725 aa20.5■□□□□ 0.87
PTPRU-206ENST00000465525 TAF1DQ9H5J8 278 aaPredicted RBP20.5■□□□□ 0.87
PTPRU-206ENST00000465525 RRAGCQ9HB90 399 aa20.5■□□□□ 0.87
PTPRU-206ENST00000465525 MCM9Q9NXL9 1143 aa20.5■□□□□ 0.87
PTPRU-206ENST00000465525 MKRN1Q9UHC7 482 aaKnown RBP20.5■□□□□ 0.87
PTPRU-206ENST00000465525 RPAP1Q9BWH6 1393 aaPredicted RBP20.5■□□□□ 0.87
PTPRU-206ENST00000465525 ASTN2O75129 1339 aaPredicted RBP20.49■□□□□ 0.87
PTPRU-206ENST00000465525 USP17L12C9JPN9 530 aa20.49■□□□□ 0.87
PTPRU-206ENST00000465525 USP17L21D6R901 530 aa20.49■□□□□ 0.87
PTPRU-206ENST00000465525 CTDSPL2Q05D32 466 aa20.49■□□□□ 0.87
PTPRU-206ENST00000465525 TCP10Q12799 353 aa20.49■□□□□ 0.87
PTPRU-206ENST00000465525 CTR9Q6PD62 1173 aa20.49■□□□□ 0.87
PTPRU-206ENST00000465525 TRPM4Q8TD43 1214 aa20.49■□□□□ 0.87
PTPRU-206ENST00000465525 DDRGK1Q96HY6 314 aa20.49■□□□□ 0.87
PTPRU-206ENST00000465525 NBPF3Q9H094 633 aa20.49■□□□□ 0.87
PTPRU-206ENST00000465525 ZNF70Q9UC06 446 aaPredicted RBP20.49■□□□□ 0.87
PTPRU-206ENST00000465525 HIRAP54198 1017 aaPredicted RBP20.48■□□□□ 0.87
PTPRU-206ENST00000465525 IMMTQ16891 758 aaKnown RBP20.48■□□□□ 0.87
PTPRU-206ENST00000465525 ADCK5Q3MIX3 580 aa20.48■□□□□ 0.87
PTPRU-206ENST00000465525 RNF20Q5VTR2 975 aa20.48■□□□□ 0.87
PTPRU-206ENST00000465525 PNMA8AQ86V59 439 aaPredicted RBP20.48■□□□□ 0.87
PTPRU-206ENST00000465525 ZFPM1Q8IX07 1006 aa20.48■□□□□ 0.87
PTPRU-206ENST00000465525 ZNF526Q8TF50 670 aaPredicted RBP20.48■□□□□ 0.87
PTPRU-206ENST00000465525 VEZTQ9HBM0 779 aa20.48■□□□□ 0.87
PTPRU-206ENST00000465525 SCAF8Q9UPN6 1271 aaKnown RBP20.48■□□□□ 0.87
PTPRU-206ENST00000465525 ZMYM6O95789 1325 aa20.48■□□□□ 0.87
PTPRU-206ENST00000465525 TCP10L2B9ZVM9 353 aa20.48■□□□□ 0.87
PTPRU-206ENST00000465525 ZNF213O14771 459 aa20.48■□□□□ 0.87
PTPRU-206ENST00000465525 STOX1Q6ZVD7 989 aa20.48■□□□□ 0.87
PTPRU-206ENST00000465525 TBC1D10CQ8IV04 446 aa20.48■□□□□ 0.87
PTPRU-206ENST00000465525 KCNB2Q92953 911 aa20.48■□□□□ 0.87
PTPRU-206ENST00000465525 INCENPQ9NQS7 918 aa20.48■□□□□ 0.87
PTPRU-206ENST00000465525 RBM19Q9Y4C8 960 aaKnown RBP20.48■□□□□ 0.87
PTPRU-206ENST00000465525 ZKSCAN1P17029 563 aaPredicted RBP20.47■□□□□ 0.87
PTPRU-206ENST00000465525 PPARAQ07869 468 aa20.47■□□□□ 0.87
PTPRU-206ENST00000465525 COL9A3Q14050 684 aaPredicted RBP20.47■□□□□ 0.87
PTPRU-206ENST00000465525 SPDYE2Q495Y8 402 aa20.47■□□□□ 0.87
PTPRU-206ENST00000465525 GIMAP6Q6P9H5 292 aa20.47■□□□□ 0.87
PTPRU-206ENST00000465525 FAM198AQ9UFP1 575 aa20.47■□□□□ 0.87
PTPRU-206ENST00000465525 NMRK2Q9NPI5 230 aa20.46■□□□□ 0.87
PTPRU-206ENST00000465525 TACC3Q9Y6A5 838 aa20.46■□□□□ 0.87
PTPRU-206ENST00000465525 POLR3DP05423 398 aaPredicted RBP20.45■□□□□ 0.86
PTPRU-206ENST00000465525 CPA1P15085 419 aa20.45■□□□□ 0.86
PTPRU-206ENST00000465525 ZC3H15Q8WU90 426 aaKnown RBP20.45■□□□□ 0.86
PTPRU-206ENST00000465525 JAKMIP1Q96N16 626 aaKnown RBP20.45■□□□□ 0.86
PTPRU-206ENST00000465525 TMOD2Q9NZR1 351 aa20.45■□□□□ 0.86
PTPRU-206ENST00000465525 E7EWF7 191 aa20.45■□□□□ 0.86
PTPRU-206ENST00000465525 YY1P25490 414 aa20.45■□□□□ 0.86
PTPRU-206ENST00000465525 IDI2Q9BXS1 227 aa20.45■□□□□ 0.86
PTPRU-206ENST00000465525 OSBPL5Q9H0X9 879 aaPredicted RBP20.45■□□□□ 0.86
PTPRU-206ENST00000465525 GPBP1L1Q9HC44 474 aaPredicted RBP20.45■□□□□ 0.86
PTPRU-206ENST00000465525 ARPP21Q9UBL0 812 aaPredicted RBP20.45■□□□□ 0.86
PTPRU-206ENST00000465525 PLCD1P51178 756 aa20.44■□□□□ 0.86
PTPRU-206ENST00000465525 ANAPC15P60006 121 aa20.44■□□□□ 0.86
PTPRU-206ENST00000465525 EAPPQ56P03 285 aaPredicted RBP20.44■□□□□ 0.86
PTPRU-206ENST00000465525 FKBP1CQ5VVH2 108 aa20.44■□□□□ 0.86
PTPRU-206ENST00000465525 DYNLL2Q96FJ2 89 aa20.44■□□□□ 0.86
PTPRU-206ENST00000465525 UPF3BQ9BZI7 483 aaKnown RBP20.44■□□□□ 0.86
PTPRU-206ENST00000465525 POLR2AP24928 1970 aaKnown RBP20.44■□□□□ 0.86
PTPRU-206ENST00000465525 SIPA1L1O43166 1804 aa20.44■□□□□ 0.86
PTPRU-206ENST00000465525 SBK1Q52WX2 424 aa20.43■□□□□ 0.86
PTPRU-206ENST00000465525 C12orf60Q5U649 245 aa20.43■□□□□ 0.86
PTPRU-206ENST00000465525 PGAP2Q9UHJ9 254 aa20.43■□□□□ 0.86
PTPRU-206ENST00000465525 CNTNAP1P78357 1384 aa20.43■□□□□ 0.86
PTPRU-206ENST00000465525 NPM3O75607 178 aaKnown RBP20.42■□□□□ 0.86
PTPRU-206ENST00000465525 CASTP20810 708 aaKnown RBP20.42■□□□□ 0.86
PTPRU-206ENST00000465525 ANGEL2Q5VTE6 544 aaKnown RBP20.42■□□□□ 0.86
PTPRU-206ENST00000465525 ZSCAN29Q8IWY8 852 aaPredicted RBP20.42■□□□□ 0.86
PTPRU-206ENST00000465525 NKX2-3Q8TAU0 364 aa20.42■□□□□ 0.86
PTPRU-206ENST00000465525 NEDD4P46934 1319 aa20.42■□□□□ 0.86
PTPRU-206ENST00000465525 DDTLA6NHG4 134 aaPredicted RBP20.42■□□□□ 0.86
PTPRU-206ENST00000465525 SLURP2P0DP57 97 aa20.42■□□□□ 0.86
PTPRU-206ENST00000465525 TSGA10IPQ3SY00 556 aa20.42■□□□□ 0.86
PTPRU-206ENST00000465525 SH3BP5LQ7L8J4 393 aa20.42■□□□□ 0.86
PTPRU-206ENST00000465525 AMOTL1Q8IY63 956 aa20.42■□□□□ 0.86
PTPRU-206ENST00000465525 PITPNM2Q9BZ72 1349 aa20.41■□□□□ 0.86
PTPRU-206ENST00000465525 MYH8P13535 1937 aa20.41■□□□□ 0.86
PTPRU-206ENST00000465525 PRDM1O75626 825 aa20.41■□□□□ 0.86
PTPRU-206ENST00000465525 TNFAIP1Q13829 316 aa20.41■□□□□ 0.86
PTPRU-206ENST00000465525 RRP12Q5JTH9 1297 aaKnown RBP20.41■□□□□ 0.86
PTPRU-206ENST00000465525 APOBEC3FQ8IUX4 373 aaKnown RBP20.41■□□□□ 0.86
PTPRU-206ENST00000465525 SLC44A5Q8NCS7 719 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms