RNA–Protein interactions for RNA: ENST00000464539.1

TNRC6A-205, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 1,853 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-205ENST00000464539 MYH15Q9Y2K3 1946 aa13.2□□□□□ -0.3
TNRC6A-205ENST00000464539 A0A087WWV3 80 aa13.19□□□□□ -0.3
TNRC6A-205ENST00000464539 PTPDC1A2A3K4 754 aa13.19□□□□□ -0.3
TNRC6A-205ENST00000464539 ZNF202O95125 648 aa13.19□□□□□ -0.3
TNRC6A-205ENST00000464539 CMA1P23946 247 aa13.19□□□□□ -0.3
TNRC6A-205ENST00000464539 HMGB2P26583 209 aaKnown RBP13.19□□□□□ -0.3
TNRC6A-205ENST00000464539 LMOD1P29536 600 aaPredicted RBP13.19□□□□□ -0.3
TNRC6A-205ENST00000464539 CFAP100Q494V2 611 aa13.19□□□□□ -0.3
TNRC6A-205ENST00000464539 CTCFLQ8NI51 663 aaPredicted RBP13.19□□□□□ -0.3
TNRC6A-205ENST00000464539 ANKRD24Q8TF21 1146 aa13.19□□□□□ -0.3
TNRC6A-205ENST00000464539 ZBTB9Q96C00 473 aa13.19□□□□□ -0.3
TNRC6A-205ENST00000464539 AGXT2Q9BYV1 514 aa13.19□□□□□ -0.3
TNRC6A-205ENST00000464539 CDC23Q9UJX2 597 aa13.19□□□□□ -0.3
TNRC6A-205ENST00000464539 KAT6BQ8WYB5 2073 aa13.19□□□□□ -0.3
TNRC6A-205ENST00000464539 A0A1B0GVL5 298 aa13.19□□□□□ -0.3
TNRC6A-205ENST00000464539 KIF1CO43896 1103 aaKnown RBP13.19□□□□□ -0.3
TNRC6A-205ENST00000464539 CAPN15O75808 1086 aa13.19□□□□□ -0.3
TNRC6A-205ENST00000464539 PRELPP51888 382 aa13.19□□□□□ -0.3
TNRC6A-205ENST00000464539 COL9A3Q14050 684 aaPredicted RBP13.19□□□□□ -0.3
TNRC6A-205ENST00000464539 MCM6Q14566 821 aa13.19□□□□□ -0.3
TNRC6A-205ENST00000464539 STK38Q15208 465 aa13.19□□□□□ -0.3
TNRC6A-205ENST00000464539 COL13A1Q5TAT6 717 aaPredicted RBP13.19□□□□□ -0.3
TNRC6A-205ENST00000464539 TADA2BQ86TJ2 420 aa13.19□□□□□ -0.3
TNRC6A-205ENST00000464539 TICAM2Q86XR7 235 aa13.19□□□□□ -0.3
TNRC6A-205ENST00000464539 FLAD1Q8NFF5 587 aa13.19□□□□□ -0.3
TNRC6A-205ENST00000464539 DHX58Q96C10 678 aa13.19□□□□□ -0.3
TNRC6A-205ENST00000464539 TACO1Q9BSH4 297 aaKnown RBP13.19□□□□□ -0.3
TNRC6A-205ENST00000464539 HSD3B7Q9H2F3 369 aa13.19□□□□□ -0.3
TNRC6A-205ENST00000464539 ANKZF1Q9H8Y5 726 aa13.19□□□□□ -0.3
TNRC6A-205ENST00000464539 FAN1Q9Y2M0 1017 aa13.19□□□□□ -0.3
TNRC6A-205ENST00000464539 SALL1Q9NSC2 1324 aa13.18□□□□□ -0.3
TNRC6A-205ENST00000464539 CCDC196A0A1B0GTZ2 297 aa13.18□□□□□ -0.3
TNRC6A-205ENST00000464539 CCDC172P0C7W6 258 aa13.18□□□□□ -0.3
TNRC6A-205ENST00000464539 NEDD4P46934 1319 aa13.18□□□□□ -0.3
TNRC6A-205ENST00000464539 GOLGB1Q14789 3259 aaKnown RBP13.18□□□□□ -0.3
TNRC6A-205ENST00000464539 DHX32Q7L7V1 743 aaKnown RBP13.18□□□□□ -0.3
TNRC6A-205ENST00000464539 BRAPQ7Z569 592 aa13.18□□□□□ -0.3
TNRC6A-205ENST00000464539 IGSF1Q8N6C5 1336 aa13.18□□□□□ -0.3
TNRC6A-205ENST00000464539 NECTIN2Q92692 538 aa13.18□□□□□ -0.3
TNRC6A-205ENST00000464539 ZNF274Q96GC6 653 aaPredicted RBP13.18□□□□□ -0.3
TNRC6A-205ENST00000464539 FMNL2Q96PY5 1086 aa13.18□□□□□ -0.3
TNRC6A-205ENST00000464539 PHAXQ9H814 394 aaKnown RBP13.18□□□□□ -0.3
TNRC6A-205ENST00000464539 NCAPD2Q15021 1401 aa13.17□□□□□ -0.3
TNRC6A-205ENST00000464539 SPTLC2O15270 562 aa13.17□□□□□ -0.3
TNRC6A-205ENST00000464539 CTDNEP1O95476 244 aa13.17□□□□□ -0.3
TNRC6A-205ENST00000464539 MCM3P25205 808 aa13.17□□□□□ -0.3
TNRC6A-205ENST00000464539 G3BP1Q13283 466 aaKnown RBP eCLIP13.17□□□□□ -0.3
TNRC6A-205ENST00000464539 OLFM4Q6UX06 510 aa13.17□□□□□ -0.3
TNRC6A-205ENST00000464539 ELOA2Q8IYF1 753 aaPredicted RBP13.17□□□□□ -0.3
TNRC6A-205ENST00000464539 CCDC12Q8WUD4 166 aaPredicted RBP13.17□□□□□ -0.3
TNRC6A-205ENST00000464539 FBXW7Q969H0 707 aa13.17□□□□□ -0.3
TNRC6A-205ENST00000464539 NAA15Q9BXJ9 866 aaKnown RBP13.17□□□□□ -0.3
TNRC6A-205ENST00000464539 FTOQ9C0B1 505 aaKnown RBP eCLIP13.17□□□□□ -0.3
TNRC6A-205ENST00000464539 AKAP2Q9Y2D5 859 aa13.17□□□□□ -0.3
TNRC6A-205ENST00000464539 CCDC175P0C221 793 aa13.16□□□□□ -0.3
TNRC6A-205ENST00000464539 TNS4Q8IZW8 715 aa13.16□□□□□ -0.3
TNRC6A-205ENST00000464539 FAM177A1Q8N128 213 aaPredicted RBP13.16□□□□□ -0.3
TNRC6A-205ENST00000464539 CNNM3Q8NE01 707 aa13.16□□□□□ -0.3
TNRC6A-205ENST00000464539 CEP83Q9Y592 693 aa13.16□□□□□ -0.3
TNRC6A-205ENST00000464539 TAF6LQ9Y6J9 622 aa13.16□□□□□ -0.3
TNRC6A-205ENST00000464539 ATP1A3P13637 1013 aa13.16□□□□□ -0.3
TNRC6A-205ENST00000464539 AARSP49588 968 aaKnown RBP eCLIP13.16□□□□□ -0.3
TNRC6A-205ENST00000464539 CASP8Q14790 479 aa13.16□□□□□ -0.3
TNRC6A-205ENST00000464539 FBXL16Q8N461 479 aa13.16□□□□□ -0.3
TNRC6A-205ENST00000464539 JMYQ8N9B5 988 aa13.16□□□□□ -0.3
TNRC6A-205ENST00000464539 DPF2Q92785 391 aa13.16□□□□□ -0.3
TNRC6A-205ENST00000464539 ABCB6Q9NP58 842 aa13.16□□□□□ -0.3
TNRC6A-205ENST00000464539 DONSONQ9NYP3 566 aa13.16□□□□□ -0.3
TNRC6A-205ENST00000464539 DOT1LQ8TEK3 1739 aa13.15□□□□□ -0.3
TNRC6A-205ENST00000464539 FLT4P35916 1363 aa13.15□□□□□ -0.3
TNRC6A-205ENST00000464539 CICQ96RK0 1608 aaPredicted RBP13.15□□□□□ -0.3
TNRC6A-205ENST00000464539 APPP05067 770 aa13.15□□□□□ -0.3
TNRC6A-205ENST00000464539 EXOSC10Q01780 885 aaKnown RBP13.15□□□□□ -0.3
TNRC6A-205ENST00000464539 WHAMMP3Q1A5X7 153 aa13.15□□□□□ -0.3
TNRC6A-205ENST00000464539 WDR93Q6P2C0 686 aa13.15□□□□□ -0.3
TNRC6A-205ENST00000464539 ZNF589Q86UQ0 364 aaPredicted RBP13.15□□□□□ -0.3
TNRC6A-205ENST00000464539 EAF2Q96CJ1 260 aaPredicted RBP13.15□□□□□ -0.3
TNRC6A-205ENST00000464539 KLRG1Q96E93 195 aa13.15□□□□□ -0.3
TNRC6A-205ENST00000464539 CXorf56Q9H5V9 222 aa13.15□□□□□ -0.3
TNRC6A-205ENST00000464539 RNF216Q9NWF9 866 aaPredicted RBP13.15□□□□□ -0.3
TNRC6A-205ENST00000464539 USP54Q70EL1 1684 aa13.15□□□□□ -0.3
TNRC6A-205ENST00000464539 FAM237AA0A1B0GTK4 181 aa13.14□□□□□ -0.31
TNRC6A-205ENST00000464539 PI4KAP2A4QPH2 592 aa13.14□□□□□ -0.31
TNRC6A-205ENST00000464539 BIN1O00499 593 aa13.14□□□□□ -0.31
TNRC6A-205ENST00000464539 KIF5CO60282 957 aa13.14□□□□□ -0.31
TNRC6A-205ENST00000464539 WDHD1O75717 1129 aaPredicted RBP13.14□□□□□ -0.31
TNRC6A-205ENST00000464539 ATP6V1AP38606 617 aa13.14□□□□□ -0.31
TNRC6A-205ENST00000464539 SPECC1LQ69YQ0 1117 aa13.14□□□□□ -0.31
TNRC6A-205ENST00000464539 FOXR1Q6PIV2 292 aa13.14□□□□□ -0.31
TNRC6A-205ENST00000464539 PI4KAP1Q8N8J0 262 aa13.14□□□□□ -0.31
TNRC6A-205ENST00000464539 TC2NQ8N9U0 490 aa13.14□□□□□ -0.31
TNRC6A-205ENST00000464539 AFAP1L1Q8TED9 768 aa13.14□□□□□ -0.31
TNRC6A-205ENST00000464539 PANX2Q96RD6 677 aa13.14□□□□□ -0.31
TNRC6A-205ENST00000464539 TOMM22Q9NS69 142 aa13.14□□□□□ -0.31
TNRC6A-205ENST00000464539 WDR90Q96KV7 1748 aa13.14□□□□□ -0.31
TNRC6A-205ENST00000464539 SASH1O94885 1247 aa13.14□□□□□ -0.31
TNRC6A-205ENST00000464539 SYNE3Q6ZMZ3 975 aa13.14□□□□□ -0.31
TNRC6A-205ENST00000464539 IL17REQ8NFR9 667 aa13.14□□□□□ -0.31
TNRC6A-205ENST00000464539 CCDC102AQ96A19 550 aa13.14□□□□□ -0.31
TNRC6A-205ENST00000464539 BOLA2Q9H3K6 86 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms