RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 ZC3H12AQ5D1E8 599 aaKnown RBP6.83□□□□□ -1.32
CLK1-208ENST00000464454 BEND4Q6ZU67 534 aa6.83□□□□□ -1.32
CLK1-208ENST00000464454 ERMP1Q7Z2K6 904 aa6.83□□□□□ -1.32
CLK1-208ENST00000464454 CCDC84Q86UT8 332 aaPredicted RBP6.83□□□□□ -1.32
CLK1-208ENST00000464454 SLC51AQ86UW1 340 aa6.83□□□□□ -1.32
CLK1-208ENST00000464454 PHC3Q8NDX5 983 aa6.83□□□□□ -1.32
CLK1-208ENST00000464454 GAL3ST3Q96A11 431 aa6.83□□□□□ -1.32
CLK1-208ENST00000464454 TMEM74Q96NL1 305 aa6.83□□□□□ -1.32
CLK1-208ENST00000464454 FAM83CQ9BQN1 747 aa6.83□□□□□ -1.32
CLK1-208ENST00000464454 SCAMP3O14828 347 aaKnown RBP6.82□□□□□ -1.32
CLK1-208ENST00000464454 RECKO95980 971 aa6.82□□□□□ -1.32
CLK1-208ENST00000464454 RAB6AP20340 208 aa6.82□□□□□ -1.32
CLK1-208ENST00000464454 GBP2P32456 591 aaPredicted RBP6.82□□□□□ -1.32
CLK1-208ENST00000464454 PAOXQ6QHF9 649 aa6.82□□□□□ -1.32
CLK1-208ENST00000464454 TRIM42Q8IWZ5 723 aa6.82□□□□□ -1.32
CLK1-208ENST00000464454 EZH1Q92800 747 aaPredicted RBP6.82□□□□□ -1.32
CLK1-208ENST00000464454 ELMO3Q96BJ8 720 aa6.82□□□□□ -1.32
CLK1-208ENST00000464454 FANCD2OSQ96PS1 177 aa6.82□□□□□ -1.32
CLK1-208ENST00000464454 FAM105AQ9NUU6 356 aa6.82□□□□□ -1.32
CLK1-208ENST00000464454 GGT7Q9UJ14 662 aa6.82□□□□□ -1.32
CLK1-208ENST00000464454 FAM95CA0A1B0GW59 222 aa6.81□□□□□ -1.32
CLK1-208ENST00000464454 TFE3P19532 575 aaPredicted RBP6.81□□□□□ -1.32
CLK1-208ENST00000464454 LMNB2Q03252 620 aa6.81□□□□□ -1.32
CLK1-208ENST00000464454 CDPF1Q6NVV7 123 aa6.81□□□□□ -1.32
CLK1-208ENST00000464454 MPRIPQ6WCQ1 1025 aa6.81□□□□□ -1.32
CLK1-208ENST00000464454 HDXQ7Z353 690 aa6.81□□□□□ -1.32
CLK1-208ENST00000464454 KRTAP4-8Q9BYQ9 185 aa6.81□□□□□ -1.32
CLK1-208ENST00000464454 SEMA6BQ9H3T3 888 aa6.81□□□□□ -1.32
CLK1-208ENST00000464454 ACSS3Q9H6R3 686 aa6.81□□□□□ -1.32
CLK1-208ENST00000464454 C7orf69Q9H7B7 122 aa6.81□□□□□ -1.32
CLK1-208ENST00000464454 PICK1Q9NRD5 415 aa6.81□□□□□ -1.32
CLK1-208ENST00000464454 KIAA1522Q9P206 1035 aaPredicted RBP6.81□□□□□ -1.32
CLK1-208ENST00000464454 TLR6Q9Y2C9 796 aa6.81□□□□□ -1.32
CLK1-208ENST00000464454 SNCAIPQ9Y6H5 919 aa6.81□□□□□ -1.32
CLK1-208ENST00000464454 CAMK2GQ13555 558 aaPredicted RBP6.8□□□□□ -1.32
CLK1-208ENST00000464454 SEPT6Q14141 434 aa6.8□□□□□ -1.32
CLK1-208ENST00000464454 LDLRAD1Q5T700 205 aa6.8□□□□□ -1.32
CLK1-208ENST00000464454 RNF214Q8ND24 703 aa6.8□□□□□ -1.32
CLK1-208ENST00000464454 FBLIM1Q8WUP2 373 aa6.8□□□□□ -1.32
CLK1-208ENST00000464454 RNF34Q969K3 372 aa6.8□□□□□ -1.32
CLK1-208ENST00000464454 RHOVQ96L33 236 aa6.8□□□□□ -1.32
CLK1-208ENST00000464454 DISC1Q9NRI5 854 aa6.8□□□□□ -1.32
CLK1-208ENST00000464454 KBTBD4Q9NVX7 518 aa6.8□□□□□ -1.32
CLK1-208ENST00000464454 PCDHB5Q9Y5E4 795 aa6.8□□□□□ -1.32
CLK1-208ENST00000464454 DCDC2CA8MYV0 355 aa6.79□□□□□ -1.32
CLK1-208ENST00000464454 FANCGO15287 622 aa6.79□□□□□ -1.32
CLK1-208ENST00000464454 BPNT1O95861 308 aa6.79□□□□□ -1.32
CLK1-208ENST00000464454 FSTP19883 344 aa6.79□□□□□ -1.32
CLK1-208ENST00000464454 FANCCQ00597 558 aa6.79□□□□□ -1.32
CLK1-208ENST00000464454 TTLL4Q14679 1199 aa6.79□□□□□ -1.32
CLK1-208ENST00000464454 NFKBIBQ15653 356 aa6.79□□□□□ -1.32
CLK1-208ENST00000464454 SNAP47Q5SQN1 464 aa6.79□□□□□ -1.32
CLK1-208ENST00000464454 RNF43Q68DV7 783 aa6.79□□□□□ -1.32
CLK1-208ENST00000464454 SMYD4Q8IYR2 804 aaPredicted RBP6.79□□□□□ -1.32
CLK1-208ENST00000464454 KCT2Q8NC54 265 aa6.79□□□□□ -1.32
CLK1-208ENST00000464454 GIMAP7Q8NHV1 300 aa6.79□□□□□ -1.32
CLK1-208ENST00000464454 SEMA6CQ9H3T2 930 aa6.79□□□□□ -1.32
CLK1-208ENST00000464454 TACC3Q9Y6A5 838 aa6.79□□□□□ -1.32
CLK1-208ENST00000464454 HMX2A2RU54 273 aa6.78□□□□□ -1.32
CLK1-208ENST00000464454 RNGTTO60942 597 aaKnown RBP6.78□□□□□ -1.32
CLK1-208ENST00000464454 IGLV1-40P01703 118 aa6.78□□□□□ -1.32
CLK1-208ENST00000464454 PF4P02776 101 aa6.78□□□□□ -1.32
CLK1-208ENST00000464454 RPL6Q02878 288 aaKnown RBP6.78□□□□□ -1.32
CLK1-208ENST00000464454 PTPN11Q06124 597 aaPredicted RBP6.78□□□□□ -1.32
CLK1-208ENST00000464454 NFIAQ12857 509 aa6.78□□□□□ -1.32
CLK1-208ENST00000464454 WIPI1Q5MNZ9 446 aaPredicted RBP6.78□□□□□ -1.32
CLK1-208ENST00000464454 LRFN4Q6PJG9 635 aa6.78□□□□□ -1.32
CLK1-208ENST00000464454 PLPPR2Q96GM1 343 aa6.78□□□□□ -1.32
CLK1-208ENST00000464454 PSMG3-AS1Q96PY0 264 aa6.78□□□□□ -1.32
CLK1-208ENST00000464454 DBNDD2Q9BQY9 259 aa6.78□□□□□ -1.32
CLK1-208ENST00000464454 SSU72Q9NP77 194 aaKnown RBP6.78□□□□□ -1.32
CLK1-208ENST00000464454 PCOLCE2Q9UKZ9 415 aa6.78□□□□□ -1.32
CLK1-208ENST00000464454 DAGLAQ9Y4D2 1042 aa6.78□□□□□ -1.32
CLK1-208ENST00000464454 PRAMEF27A3QJZ7 478 aa6.77□□□□□ -1.33
CLK1-208ENST00000464454 MINDY4BA8MYZ0 360 aa6.77□□□□□ -1.33
CLK1-208ENST00000464454 F6X3S4 739 aa6.77□□□□□ -1.33
CLK1-208ENST00000464454 NFICP08651 508 aa6.77□□□□□ -1.33
CLK1-208ENST00000464454 HCLS1P14317 486 aaPredicted RBP6.77□□□□□ -1.33
CLK1-208ENST00000464454 RING1Q06587 406 aa6.77□□□□□ -1.33
CLK1-208ENST00000464454 PPM1JQ5JR12 505 aa6.77□□□□□ -1.33
CLK1-208ENST00000464454 PRSS36Q5K4E3 855 aa6.77□□□□□ -1.33
CLK1-208ENST00000464454 ZBTB37Q5TC79 503 aa6.77□□□□□ -1.33
CLK1-208ENST00000464454 CYFIP1Q7L576 1253 aa6.77□□□□□ -1.33
CLK1-208ENST00000464454 C12orf40Q86WS4 652 aa6.77□□□□□ -1.33
CLK1-208ENST00000464454 GATAD2BQ8WXI9 593 aa6.77□□□□□ -1.33
CLK1-208ENST00000464454 JARID2Q92833 1246 aaPredicted RBP6.77□□□□□ -1.33
CLK1-208ENST00000464454 SUPT16HQ9Y5B9 1047 aaKnown RBP6.77□□□□□ -1.33
CLK1-208ENST00000464454 CSADQ9Y600 493 aa6.77□□□□□ -1.33
CLK1-208ENST00000464454 EIF4A3P38919 411 aaKnown RBP6.76□□□□□ -1.33
CLK1-208ENST00000464454 INPP5AQ14642 412 aa6.76□□□□□ -1.33
CLK1-208ENST00000464454 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.76□□□□□ -1.33
CLK1-208ENST00000464454 CDC37L1Q7L3B6 337 aa6.76□□□□□ -1.33
CLK1-208ENST00000464454 USP48Q86UV5 1035 aa6.76□□□□□ -1.33
CLK1-208ENST00000464454 GOLM1Q8NBJ4 401 aa6.76□□□□□ -1.33
CLK1-208ENST00000464454 ZNF507Q8TCN5 953 aa6.76□□□□□ -1.33
CLK1-208ENST00000464454 ISL2Q96A47 359 aa6.76□□□□□ -1.33
CLK1-208ENST00000464454 COPRSQ9NQ92 184 aa6.76□□□□□ -1.33
CLK1-208ENST00000464454 KCNQ5Q9NR82 932 aa6.76□□□□□ -1.33
CLK1-208ENST00000464454 PRKAG2Q9UGJ0 569 aa6.76□□□□□ -1.33
CLK1-208ENST00000464454 ROBO2Q9HCK4 1378 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms