RNA–Protein interactions for RNA: ENST00000463005.1

GARNL3-212, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 887 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-212ENST00000463005 LIMD1Q9UGP4 676 aa10.14□□□□□ -0.79
GARNL3-212ENST00000463005 CLRN2A0PK11 232 aa10.13□□□□□ -0.79
GARNL3-212ENST00000463005 APAF1O14727 1248 aa10.13□□□□□ -0.79
GARNL3-212ENST00000463005 GNRH1P01148 92 aa10.13□□□□□ -0.79
GARNL3-212ENST00000463005 KLRK1P26718 216 aa10.13□□□□□ -0.79
GARNL3-212ENST00000463005 GJA5P36382 358 aa10.13□□□□□ -0.79
GARNL3-212ENST00000463005 GTF2A2P52657 109 aa10.13□□□□□ -0.79
GARNL3-212ENST00000463005 GCKRQ14397 625 aa10.13□□□□□ -0.79
GARNL3-212ENST00000463005 RASA3Q14644 834 aa10.13□□□□□ -0.79
GARNL3-212ENST00000463005 SLC4A8Q2Y0W8 1093 aa10.13□□□□□ -0.79
GARNL3-212ENST00000463005 SLC9C1Q4G0N8 1177 aa10.13□□□□□ -0.79
GARNL3-212ENST00000463005 OPTNQ96CV9 577 aa10.13□□□□□ -0.79
GARNL3-212ENST00000463005 FAM163AQ96GL9 167 aaPredicted RBP10.13□□□□□ -0.79
GARNL3-212ENST00000463005 MYH16Q9H6N6 1097 aa10.13□□□□□ -0.79
GARNL3-212ENST00000463005 VEZTQ9HBM0 779 aa10.13□□□□□ -0.79
GARNL3-212ENST00000463005 SSC5DA1L4H1 1573 aa10.13□□□□□ -0.79
GARNL3-212ENST00000463005 IRS2Q9Y4H2 1338 aa10.12□□□□□ -0.79
GARNL3-212ENST00000463005 F8W031 263 aaPredicted RBP10.12□□□□□ -0.79
GARNL3-212ENST00000463005 RBM5P52756 815 aaKnown RBP eCLIP10.12□□□□□ -0.79
GARNL3-212ENST00000463005 CASP7P55210 303 aa10.12□□□□□ -0.79
GARNL3-212ENST00000463005 PRMT2P55345 433 aa10.12□□□□□ -0.79
GARNL3-212ENST00000463005 KIF22Q14807 665 aa10.12□□□□□ -0.79
GARNL3-212ENST00000463005 TAF1CQ15572 869 aaPredicted RBP10.12□□□□□ -0.79
GARNL3-212ENST00000463005 ZCCHC17Q9NP64 241 aaKnown RBP10.12□□□□□ -0.79
GARNL3-212ENST00000463005 FAM205AQ6ZU69 1335 aa10.11□□□□□ -0.79
GARNL3-212ENST00000463005 CCL15-CCL14A0A0B4J2E2 113 aa10.11□□□□□ -0.79
GARNL3-212ENST00000463005 ARHGAP33O14559 1287 aa10.11□□□□□ -0.79
GARNL3-212ENST00000463005 TAF5LO75529 589 aa10.11□□□□□ -0.79
GARNL3-212ENST00000463005 NDUFV2P19404 249 aa10.11□□□□□ -0.79
GARNL3-212ENST00000463005 TNNI2P48788 182 aa10.11□□□□□ -0.79
GARNL3-212ENST00000463005 CLK2P49760 499 aaKnown RBP10.11□□□□□ -0.79
GARNL3-212ENST00000463005 IFIT5Q13325 482 aaKnown RBP10.11□□□□□ -0.79
GARNL3-212ENST00000463005 CCL15Q16663 113 aa10.11□□□□□ -0.79
GARNL3-212ENST00000463005 CSPP1Q1MSJ5 1256 aa10.11□□□□□ -0.79
GARNL3-212ENST00000463005 SWT1Q5T5J6 900 aaKnown RBP10.11□□□□□ -0.79
GARNL3-212ENST00000463005 TSPYL6Q8N831 410 aa10.11□□□□□ -0.79
GARNL3-212ENST00000463005 RDH13Q8NBN7 331 aa10.11□□□□□ -0.79
GARNL3-212ENST00000463005 LINS1Q8NG48 757 aa10.11□□□□□ -0.79
GARNL3-212ENST00000463005 ELP3Q9H9T3 547 aa10.11□□□□□ -0.79
GARNL3-212ENST00000463005 ZNF70Q9UC06 446 aaPredicted RBP10.11□□□□□ -0.79
GARNL3-212ENST00000463005 SERPINA10Q9UK55 444 aa10.11□□□□□ -0.79
GARNL3-212ENST00000463005 PCDHAC2Q9Y5I4 1007 aa10.11□□□□□ -0.79
GARNL3-212ENST00000463005 PTCH2Q9Y6C5 1203 aa10.11□□□□□ -0.79
GARNL3-212ENST00000463005 OTOFQ9HC10 1997 aa10.11□□□□□ -0.79
GARNL3-212ENST00000463005 A0A1B0GUL6 1792 aa10.11□□□□□ -0.79
GARNL3-212ENST00000463005 CAP1Q01518 475 aa10.1□□□□□ -0.79
GARNL3-212ENST00000463005 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.1□□□□□ -0.79
GARNL3-212ENST00000463005 FAM9BQ8IZU0 186 aa10.1□□□□□ -0.79
GARNL3-212ENST00000463005 HELBQ8NG08 1087 aaPredicted RBP10.1□□□□□ -0.79
GARNL3-212ENST00000463005 BRI3BPQ8WY22 251 aa10.1□□□□□ -0.79
GARNL3-212ENST00000463005 ZMYND15Q9H091 742 aa10.1□□□□□ -0.79
GARNL3-212ENST00000463005 CSADQ9Y600 493 aa10.1□□□□□ -0.79
GARNL3-212ENST00000463005 MOXD2PA6NHM9 499 aa10.09□□□□□ -0.79
GARNL3-212ENST00000463005 H0YGN5 161 aa10.09□□□□□ -0.79
GARNL3-212ENST00000463005 SNAP23O00161 211 aa10.09□□□□□ -0.79
GARNL3-212ENST00000463005 TLR2O60603 784 aa10.09□□□□□ -0.79
GARNL3-212ENST00000463005 CETPP11597 493 aa10.09□□□□□ -0.79
GARNL3-212ENST00000463005 TWISTNBQ3B726 338 aaPredicted RBP10.09□□□□□ -0.79
GARNL3-212ENST00000463005 G2E3Q7L622 706 aa10.09□□□□□ -0.79
GARNL3-212ENST00000463005 TDRD7Q8NHU6 1098 aaKnown RBP10.09□□□□□ -0.79
GARNL3-212ENST00000463005 NKX2-3Q8TAU0 364 aa10.09□□□□□ -0.79
GARNL3-212ENST00000463005 DNAAF4Q8WXU2 420 aa10.09□□□□□ -0.79
GARNL3-212ENST00000463005 TEPSINQ96N21 525 aa10.09□□□□□ -0.79
GARNL3-212ENST00000463005 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.09□□□□□ -0.79
GARNL3-212ENST00000463005 TDRD3Q9H7E2 651 aaKnown RBP10.09□□□□□ -0.79
GARNL3-212ENST00000463005 TTF2Q9UNY4 1162 aaKnown RBP10.09□□□□□ -0.79
GARNL3-212ENST00000463005 SPDYE5A6NIY4 337 aa10.08□□□□□ -0.8
GARNL3-212ENST00000463005 HOXD10P28358 340 aa10.08□□□□□ -0.8
GARNL3-212ENST00000463005 HDLBPQ00341 1268 aaKnown RBP10.08□□□□□ -0.8
GARNL3-212ENST00000463005 FLIIQ13045 1269 aa10.08□□□□□ -0.8
GARNL3-212ENST00000463005 UBE4AQ14139 1066 aa10.08□□□□□ -0.8
GARNL3-212ENST00000463005 CCDC57Q2TAC2 916 aa10.08□□□□□ -0.8
GARNL3-212ENST00000463005 MFSD14BQ5SR56 506 aa10.08□□□□□ -0.8
GARNL3-212ENST00000463005 LDHAL6AQ6ZMR3 332 aa10.08□□□□□ -0.8
GARNL3-212ENST00000463005 ERO1BQ86YB8 467 aa10.08□□□□□ -0.8
GARNL3-212ENST00000463005 DZIP1LQ8IYY4 767 aaKnown RBP10.08□□□□□ -0.8
GARNL3-212ENST00000463005 FAM43AQ8N2R8 423 aa10.08□□□□□ -0.8
GARNL3-212ENST00000463005 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.08□□□□□ -0.8
GARNL3-212ENST00000463005 HLA-CQ95604 372 aa10.08□□□□□ -0.8
GARNL3-212ENST00000463005 CLUAP1Q96AJ1 413 aa10.08□□□□□ -0.8
GARNL3-212ENST00000463005 HOOK2Q96ED9 719 aa10.08□□□□□ -0.8
GARNL3-212ENST00000463005 MKI67P46013 3256 aaKnown RBP10.08□□□□□ -0.8
GARNL3-212ENST00000463005 AOX1Q06278 1338 aa10.07□□□□□ -0.8
GARNL3-212ENST00000463005 ARAP2Q8WZ64 1704 aa10.07□□□□□ -0.8
GARNL3-212ENST00000463005 CEP290O15078 2479 aa10.07□□□□□ -0.8
GARNL3-212ENST00000463005 CAPN2P17655 700 aa10.07□□□□□ -0.8
GARNL3-212ENST00000463005 HIBADHP31937 336 aaKnown RBP10.07□□□□□ -0.8
GARNL3-212ENST00000463005 LACTBP83111 547 aaPredicted RBP10.07□□□□□ -0.8
GARNL3-212ENST00000463005 FOXO4P98177 505 aa10.07□□□□□ -0.8
GARNL3-212ENST00000463005 FKBP5Q13451 457 aaPredicted RBP10.07□□□□□ -0.8
GARNL3-212ENST00000463005 VGLL4Q14135 290 aa10.07□□□□□ -0.8
GARNL3-212ENST00000463005 CCDC27Q2M243 656 aa10.07□□□□□ -0.8
GARNL3-212ENST00000463005 LCE2DQ5TA82 110 aaPredicted RBP10.07□□□□□ -0.8
GARNL3-212ENST00000463005 DPF3Q92784 378 aa10.07□□□□□ -0.8
GARNL3-212ENST00000463005 HS3ST6Q96QI5 342 aa10.07□□□□□ -0.8
GARNL3-212ENST00000463005 HTATIP2Q9BUP3 242 aa10.07□□□□□ -0.8
GARNL3-212ENST00000463005 MRIQ9BWK5 157 aa10.07□□□□□ -0.8
GARNL3-212ENST00000463005 CNNM1Q9NRU3 951 aa10.07□□□□□ -0.8
GARNL3-212ENST00000463005 VPS9D1Q9Y2B5 631 aa10.07□□□□□ -0.8
GARNL3-212ENST00000463005 CHMP3Q9Y3E7 222 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms