RNA–Protein interactions for RNA: ENST00000462731.1

SGCE-209, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-209ENST00000462731 TBC1D10BQ4KMP7 808 aaPredicted RBP7.6□□□□□ -1.19
SGCE-209ENST00000462731 TBCELQ5QJ74 424 aa7.6□□□□□ -1.19
SGCE-209ENST00000462731 PDXDC1Q6P996 788 aa7.6□□□□□ -1.19
SGCE-209ENST00000462731 DDX46Q7L014 1031 aaKnown RBP7.6□□□□□ -1.19
SGCE-209ENST00000462731 CRIPAKQ8N1N5 446 aa7.6□□□□□ -1.19
SGCE-209ENST00000462731 C3orf58Q8NDZ4 430 aa7.6□□□□□ -1.19
SGCE-209ENST00000462731 WDR66Q8TBY9 1149 aa7.6□□□□□ -1.19
SGCE-209ENST00000462731 GJA10Q969M2 543 aa7.6□□□□□ -1.19
SGCE-209ENST00000462731 TARS2Q9BW92 718 aaKnown RBP7.6□□□□□ -1.19
SGCE-209ENST00000462731 LRRC3Q9BY71 257 aa7.6□□□□□ -1.19
SGCE-209ENST00000462731 PUS7LQ9H0K6 701 aaKnown RBP7.6□□□□□ -1.19
SGCE-209ENST00000462731 FBRSQ9HAH7 460 aa7.6□□□□□ -1.19
SGCE-209ENST00000462731 HDAC9Q9UKV0 1011 aa7.6□□□□□ -1.19
SGCE-209ENST00000462731 IPPQ9Y573 584 aa7.6□□□□□ -1.19
SGCE-209ENST00000462731 CBFA2T2O43439 604 aa7.59□□□□□ -1.19
SGCE-209ENST00000462731 DHX16O60231 1041 aaKnown RBP7.59□□□□□ -1.19
SGCE-209ENST00000462731 MICAL2O94851 1124 aa7.59□□□□□ -1.19
SGCE-209ENST00000462731 FAM153BP0C7A2 387 aa7.59□□□□□ -1.19
SGCE-209ENST00000462731 RBP3P10745 1247 aa7.59□□□□□ -1.19
SGCE-209ENST00000462731 SERPINB3P29508 390 aa7.59□□□□□ -1.19
SGCE-209ENST00000462731 ERVK-9P63128 1117 aa7.59□□□□□ -1.19
SGCE-209ENST00000462731 LMNB2Q03252 620 aa7.59□□□□□ -1.19
SGCE-209ENST00000462731 FNDC3BQ53EP0 1204 aaKnown RBP7.59□□□□□ -1.19
SGCE-209ENST00000462731 FAM133BQ5BKY9 247 aaKnown RBP7.59□□□□□ -1.19
SGCE-209ENST00000462731 C1QTNF12Q5T7M4 302 aa7.59□□□□□ -1.19
SGCE-209ENST00000462731 XKR5Q6UX68 686 aa7.59□□□□□ -1.19
SGCE-209ENST00000462731 FAM196AQ6ZSG2 479 aa7.59□□□□□ -1.19
SGCE-209ENST00000462731 SV2BQ7L1I2 683 aa7.59□□□□□ -1.19
SGCE-209ENST00000462731 GOLM1Q8NBJ4 401 aa7.59□□□□□ -1.19
SGCE-209ENST00000462731 TIFAQ96CG3 184 aa7.59□□□□□ -1.19
SGCE-209ENST00000462731 FERD3LQ96RJ6 166 aa7.59□□□□□ -1.19
SGCE-209ENST00000462731 TSPAN18Q96SJ8 248 aa7.59□□□□□ -1.19
SGCE-209ENST00000462731 UNC93B1Q9H1C4 597 aa7.59□□□□□ -1.19
SGCE-209ENST00000462731 TNKS2Q9H2K2 1166 aa7.59□□□□□ -1.19
SGCE-209ENST00000462731 ZFYVE28Q9HCC9 887 aa7.59□□□□□ -1.19
SGCE-209ENST00000462731 GTF2IRD1Q9UHL9 959 aa7.59□□□□□ -1.19
SGCE-209ENST00000462731 FOXD3Q9UJU5 478 aaPredicted RBP7.59□□□□□ -1.19
SGCE-209ENST00000462731 PRSS47A8MTI9 375 aa7.58□□□□□ -1.2
SGCE-209ENST00000462731 TERTO14746 1132 aaKnown RBP7.58□□□□□ -1.2
SGCE-209ENST00000462731 GPR39O43194 453 aa7.58□□□□□ -1.2
SGCE-209ENST00000462731 RNF40O75150 1001 aa7.58□□□□□ -1.2
SGCE-209ENST00000462731 GADD45BO75293 160 aaPredicted RBP7.58□□□□□ -1.2
SGCE-209ENST00000462731 DDAH1O94760 285 aa7.58□□□□□ -1.2
SGCE-209ENST00000462731 PF4P02776 101 aa7.58□□□□□ -1.2
SGCE-209ENST00000462731 HSP90AB1P08238 724 aaKnown RBP7.58□□□□□ -1.2
SGCE-209ENST00000462731 RRM1P23921 792 aa7.58□□□□□ -1.2
SGCE-209ENST00000462731 POLD1P28340 1107 aa7.58□□□□□ -1.2
SGCE-209ENST00000462731 COPS2P61201 443 aa7.58□□□□□ -1.2
SGCE-209ENST00000462731 GPSM2P81274 684 aa7.58□□□□□ -1.2
SGCE-209ENST00000462731 BIRC3Q13489 604 aa7.58□□□□□ -1.2
SGCE-209ENST00000462731 GRM2Q14416 872 aa7.58□□□□□ -1.2
SGCE-209ENST00000462731 CBX2Q14781 532 aaPredicted RBP7.58□□□□□ -1.2
SGCE-209ENST00000462731 DACT2Q5SW24 774 aa7.58□□□□□ -1.2
SGCE-209ENST00000462731 JAKMIP3Q5VZ66 844 aa7.58□□□□□ -1.2
SGCE-209ENST00000462731 PPP4R3AQ6IN85 833 aa7.58□□□□□ -1.2
SGCE-209ENST00000462731 CASC1Q6TDU7 716 aa7.58□□□□□ -1.2
SGCE-209ENST00000462731 STRA8Q7Z7C7 330 aa7.58□□□□□ -1.2
SGCE-209ENST00000462731 ANKRD23Q86SG2 305 aa7.58□□□□□ -1.2
SGCE-209ENST00000462731 NGLY1Q96IV0 654 aa7.58□□□□□ -1.2
SGCE-209ENST00000462731 SERINC2Q96SA4 455 aa7.58□□□□□ -1.2
SGCE-209ENST00000462731 LRRC27Q9C0I9 530 aa7.58□□□□□ -1.2
SGCE-209ENST00000462731 ETNK1Q9HBU6 452 aa7.58□□□□□ -1.2
SGCE-209ENST00000462731 NCOA5Q9HCD5 579 aaKnown RBP7.58□□□□□ -1.2
SGCE-209ENST00000462731 LUC7LQ9NQ29 371 aaKnown RBP7.58□□□□□ -1.2
SGCE-209ENST00000462731 INTS7Q9NVH2 962 aaKnown RBP7.58□□□□□ -1.2
SGCE-209ENST00000462731 A0A1W2PRQ8 180 aa7.57□□□□□ -1.2
SGCE-209ENST00000462731 C9IYK1 514 aa7.57□□□□□ -1.2
SGCE-209ENST00000462731 PLD2O14939 933 aa7.57□□□□□ -1.2
SGCE-209ENST00000462731 FIBPO43427 364 aa7.57□□□□□ -1.2
SGCE-209ENST00000462731 RPN1P04843 607 aaKnown RBP7.57□□□□□ -1.2
SGCE-209ENST00000462731 IMPDH2P12268 514 aa7.57□□□□□ -1.2
SGCE-209ENST00000462731 LIG3P49916 1009 aa7.57□□□□□ -1.2
SGCE-209ENST00000462731 MMP16P51512 607 aa7.57□□□□□ -1.2
SGCE-209ENST00000462731 GJA9P57773 515 aa7.57□□□□□ -1.2
SGCE-209ENST00000462731 DDX10Q13206 875 aaKnown RBP7.57□□□□□ -1.2
SGCE-209ENST00000462731 TCIRG1Q13488 830 aa7.57□□□□□ -1.2
SGCE-209ENST00000462731 CAMK2GQ13555 558 aaPredicted RBP7.57□□□□□ -1.2
SGCE-209ENST00000462731 GBX1Q14549 363 aa7.57□□□□□ -1.2
SGCE-209ENST00000462731 SAFBQ15424 915 aaKnown RBP eCLIP7.57□□□□□ -1.2
SGCE-209ENST00000462731 MINDY4Q4G0A6 757 aa7.57□□□□□ -1.2
SGCE-209ENST00000462731 SEZ6Q53EL9 994 aa7.57□□□□□ -1.2
SGCE-209ENST00000462731 SPATS2Q86XZ4 545 aaKnown RBP7.57□□□□□ -1.2
SGCE-209ENST00000462731 TREML1Q86YW5 311 aa7.57□□□□□ -1.2
SGCE-209ENST00000462731 PPM1KQ8N3J5 372 aa7.57□□□□□ -1.2
SGCE-209ENST00000462731 C19orf47Q8N9M1 422 aaKnown RBP7.57□□□□□ -1.2
SGCE-209ENST00000462731 ZBTB38Q8NAP3 1195 aaPredicted RBP7.57□□□□□ -1.2
SGCE-209ENST00000462731 RBBP8NLQ8NC74 664 aaPredicted RBP7.57□□□□□ -1.2
SGCE-209ENST00000462731 VPS37AQ8NEZ2 397 aa7.57□□□□□ -1.2
SGCE-209ENST00000462731 USP33Q8TEY7 942 aa7.57□□□□□ -1.2
SGCE-209ENST00000462731 SPATA9Q9BWV2 254 aa7.57□□□□□ -1.2
SGCE-209ENST00000462731 C1QTNF2Q9BXJ5 285 aa7.57□□□□□ -1.2
SGCE-209ENST00000462731 CCDC8Q9H0W5 538 aaPredicted RBP7.57□□□□□ -1.2
SGCE-209ENST00000462731 OSBPL3Q9H4L5 887 aa7.57□□□□□ -1.2
SGCE-209ENST00000462731 RETREG1Q9H6L5 497 aa7.57□□□□□ -1.2
SGCE-209ENST00000462731 CWC25Q9NXE8 425 aaPredicted RBP7.57□□□□□ -1.2
SGCE-209ENST00000462731 ZFATQ9P243 1243 aa7.57□□□□□ -1.2
SGCE-209ENST00000462731 LUC7L2Q9Y383 392 aaKnown RBP7.57□□□□□ -1.2
SGCE-209ENST00000462731 MORC2Q9Y6X9 1032 aaPredicted RBP7.57□□□□□ -1.2
SGCE-209ENST00000462731 EML1O00423 815 aa7.56□□□□□ -1.2
SGCE-209ENST00000462731 ADCY3O60266 1144 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms