RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 ATRNO75882 1429 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 CCDC196A0A1B0GTZ2 297 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 ERICH2A1L162 156 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 VWA3AA6NCI4 1184 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 ERVV-2B6SEH9 535 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 TMEM232C9JQI7 657 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 AKR1B15C9JRZ8 316 aaPredicted RBP4.02□□□□□ -1.77
COL8A1-204ENST00000462604 IFIT3O14879 490 aaKnown RBP4.02□□□□□ -1.77
COL8A1-204ENST00000462604 FOXP2O15409 715 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 KIF5CO60282 957 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 STX10O60499 249 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 ERLIN1O75477 346 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 EIF3JO75822 258 aaKnown RBP4.02□□□□□ -1.77
COL8A1-204ENST00000462604 ZRANB2O95218 330 aaKnown RBP eCLIP4.02□□□□□ -1.77
COL8A1-204ENST00000462604 FMNL1O95466 1100 aaPredicted RBP4.02□□□□□ -1.77
COL8A1-204ENST00000462604 BMP15O95972 392 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 PCCAP05165 728 aaPredicted RBP4.02□□□□□ -1.77
COL8A1-204ENST00000462604 CCDC175P0C221 793 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 IFNAR1P17181 557 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 XBP1P17861 261 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 ATF3P18847 181 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 ERCC5P28715 1186 aaPredicted RBP4.02□□□□□ -1.77
COL8A1-204ENST00000462604 CYP2C19P33261 490 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 ADD2P35612 726 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 PLA2G4AP47712 749 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 PLCD1P51178 756 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 RCAN1P53805 252 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 TBX2Q13207 712 aaPredicted RBP4.02□□□□□ -1.77
COL8A1-204ENST00000462604 BRD3Q15059 726 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 POSTNQ15063 836 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 PTPAQ15257 358 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 UBE3CQ15386 1083 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 ALX1Q15699 326 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 LONRF3Q496Y0 759 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 FILIP1LQ4L180 1135 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 RILPL1Q5EBL4 403 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 SLC9C2Q5TAH2 1124 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 ISM2Q6H9L7 571 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 APOA5Q6Q788 366 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 CADPS2Q86UW7 1296 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 METTL16Q86W50 562 aaKnown RBP4.02□□□□□ -1.77
COL8A1-204ENST00000462604 TBC1D10CQ8IV04 446 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 REXO1L1PQ8IX06 675 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 CCDC82Q8N4S0 544 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 CEP112Q8N8E3 955 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 ZNF579Q8NAF0 562 aaKnown RBP4.02□□□□□ -1.77
COL8A1-204ENST00000462604 LRRN4CLQ8ND94 238 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 ENOX1Q8TC92 643 aaKnown RBP4.02□□□□□ -1.77
COL8A1-204ENST00000462604 CCDC12Q8WUD4 166 aaPredicted RBP4.02□□□□□ -1.77
COL8A1-204ENST00000462604 RABGGTAQ92696 567 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 DPF2Q92785 391 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 AIDAQ96BJ3 306 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 ZNF512BQ96KM6 892 aaPredicted RBP4.02□□□□□ -1.77
COL8A1-204ENST00000462604 AIFM3Q96NN9 605 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 PANX2Q96RD6 677 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 MAP3K14Q99558 947 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 ISCA1Q9BUE6 129 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 UTP14AQ9BVJ6 771 aaKnown RBP4.02□□□□□ -1.77
COL8A1-204ENST00000462604 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.02□□□□□ -1.77
COL8A1-204ENST00000462604 PLA2G12BQ9BX93 195 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 SLC26A6Q9BXS9 759 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 PUS3Q9BZE2 481 aaKnown RBP4.02□□□□□ -1.77
COL8A1-204ENST00000462604 KRT23Q9C075 422 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 PUS7LQ9H0K6 701 aaKnown RBP4.02□□□□□ -1.77
COL8A1-204ENST00000462604 GBP3Q9H0R5 595 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 CNNM2Q9H8M5 875 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 LY9Q9HBG7 655 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 ARFGAP3Q9NP61 516 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.02□□□□□ -1.77
COL8A1-204ENST00000462604 FANCLQ9NW38 375 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 MAN1B1Q9UKM7 699 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 NFE2L3Q9Y4A8 694 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 MRFAP1Q9Y605 127 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 PARP3Q9Y6F1 533 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 TNS3Q68CZ2 1445 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 NID2Q14112 1375 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 RTL9Q8NET4 1388 aa4.02□□□□□ -1.77
COL8A1-204ENST00000462604 AK9Q5TCS8 1911 aa4.01□□□□□ -1.77
COL8A1-204ENST00000462604 UBN2Q6ZU65 1347 aa4.01□□□□□ -1.77
COL8A1-204ENST00000462604 CDHR2Q9BYE9 1310 aa4.01□□□□□ -1.77
COL8A1-204ENST00000462604 SYNRGQ9UMZ2 1314 aa4.01□□□□□ -1.77
COL8A1-204ENST00000462604 KIF1AQ12756 1690 aa4.01□□□□□ -1.77
COL8A1-204ENST00000462604 ANKRD18BA2A2Z9 1011 aa4.01□□□□□ -1.77
COL8A1-204ENST00000462604 TESPA1A2RU30 521 aaPredicted RBP4.01□□□□□ -1.77
COL8A1-204ENST00000462604 CCDC151A5D8V7 595 aa4.01□□□□□ -1.77
COL8A1-204ENST00000462604 SEMA3EO15041 775 aa4.01□□□□□ -1.77
COL8A1-204ENST00000462604 POLR3GO15318 223 aaPredicted RBP4.01□□□□□ -1.77
COL8A1-204ENST00000462604 ONECUT3O60422 494 aaPredicted RBP4.01□□□□□ -1.77
COL8A1-204ENST00000462604 RANBP6O60518 1105 aaKnown RBP4.01□□□□□ -1.77
COL8A1-204ENST00000462604 IDH1O75874 414 aaKnown RBP4.01□□□□□ -1.77
COL8A1-204ENST00000462604 SEC31AO94979 1220 aaKnown RBP4.01□□□□□ -1.77
COL8A1-204ENST00000462604 MMP1P03956 469 aa4.01□□□□□ -1.77
COL8A1-204ENST00000462604 A1BGP04217 495 aa4.01□□□□□ -1.77
COL8A1-204ENST00000462604 CSF1RP07333 972 aa4.01□□□□□ -1.77
COL8A1-204ENST00000462604 TUBBP07437 444 aa4.01□□□□□ -1.77
COL8A1-204ENST00000462604 SLC5A1P13866 664 aa4.01□□□□□ -1.77
COL8A1-204ENST00000462604 PDE6AP16499 860 aa4.01□□□□□ -1.77
COL8A1-204ENST00000462604 ZNF18P17022 549 aa4.01□□□□□ -1.77
COL8A1-204ENST00000462604 GNAT2P19087 354 aa4.01□□□□□ -1.77
COL8A1-204ENST00000462604 PTPREP23469 700 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms