RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 PLD4Q96BZ4 506 aa7.44□□□□□ -1.22
COPS3-204ENST00000462236 C19orf44Q9H6X5 657 aa7.44□□□□□ -1.22
COPS3-204ENST00000462236 ENAMQ9NRM1 1142 aa7.44□□□□□ -1.22
COPS3-204ENST00000462236 SLC52A1Q9NWF4 448 aa7.44□□□□□ -1.22
COPS3-204ENST00000462236 MST1RQ04912 1400 aa7.44□□□□□ -1.22
COPS3-204ENST00000462236 WIPF1O43516 503 aa7.43□□□□□ -1.22
COPS3-204ENST00000462236 RGS9O75916 674 aaPredicted RBP7.43□□□□□ -1.22
COPS3-204ENST00000462236 CELA2BP08218 269 aaPredicted RBP7.43□□□□□ -1.22
COPS3-204ENST00000462236 GSTT1P30711 240 aa7.43□□□□□ -1.22
COPS3-204ENST00000462236 HFE2Q6ZVN8 426 aa7.43□□□□□ -1.22
COPS3-204ENST00000462236 GLIS3Q8NEA6 775 aa7.43□□□□□ -1.22
COPS3-204ENST00000462236 BTBD6Q96KE9 485 aa7.43□□□□□ -1.22
COPS3-204ENST00000462236 TCF12Q99081 682 aa7.43□□□□□ -1.22
COPS3-204ENST00000462236 LPIN3Q9BQK8 851 aa7.43□□□□□ -1.22
COPS3-204ENST00000462236 OSBPL7Q9BZF2 842 aa7.43□□□□□ -1.22
COPS3-204ENST00000462236 LATS2Q9NRM7 1088 aa7.43□□□□□ -1.22
COPS3-204ENST00000462236 NAGPAQ9UK23 515 aa7.43□□□□□ -1.22
COPS3-204ENST00000462236 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.43□□□□□ -1.22
COPS3-204ENST00000462236 KANK1Q14678 1352 aa7.43□□□□□ -1.22
COPS3-204ENST00000462236 PNPLA6Q8IY17 1366 aa7.43□□□□□ -1.22
COPS3-204ENST00000462236 DAPK1P53355 1430 aa7.43□□□□□ -1.22
COPS3-204ENST00000462236 IQGAP3Q86VI3 1631 aa7.42□□□□□ -1.22
COPS3-204ENST00000462236 SPHKAPQ2M3C7 1700 aa7.42□□□□□ -1.22
COPS3-204ENST00000462236 TMEM238LA0A1B0GVL6 79 aa7.42□□□□□ -1.22
COPS3-204ENST00000462236 EIF4EBP3O60516 100 aaPredicted RBP7.42□□□□□ -1.22
COPS3-204ENST00000462236 MAP3K10Q02779 954 aa7.42□□□□□ -1.22
COPS3-204ENST00000462236 PSAPL1Q6NUJ1 521 aa7.42□□□□□ -1.22
COPS3-204ENST00000462236 PI16Q6UXB8 463 aa7.42□□□□□ -1.22
COPS3-204ENST00000462236 C20orf204Q6ZNR8 217 aa7.42□□□□□ -1.22
COPS3-204ENST00000462236 CHSY3Q70JA7 882 aa7.42□□□□□ -1.22
COPS3-204ENST00000462236 CRELD1Q96HD1 420 aa7.42□□□□□ -1.22
COPS3-204ENST00000462236 ADAM19Q9H013 955 aa7.42□□□□□ -1.22
COPS3-204ENST00000462236 RASSF4Q9H2L5 321 aa7.42□□□□□ -1.22
COPS3-204ENST00000462236 KIAA1522Q9P206 1035 aaPredicted RBP7.42□□□□□ -1.22
COPS3-204ENST00000462236 PPM1HQ9ULR3 514 aa7.42□□□□□ -1.22
COPS3-204ENST00000462236 ADGRL2O95490 1459 aa7.42□□□□□ -1.22
COPS3-204ENST00000462236 FAM177BA6PVY3 158 aa7.41□□□□□ -1.22
COPS3-204ENST00000462236 PTPRAP18433 802 aa7.41□□□□□ -1.22
COPS3-204ENST00000462236 ITPKAP23677 461 aa7.41□□□□□ -1.22
COPS3-204ENST00000462236 RPS26P11Q5JNZ5 115 aaPredicted RBP7.41□□□□□ -1.22
COPS3-204ENST00000462236 NXPE4Q6UWF7 544 aa7.41□□□□□ -1.22
COPS3-204ENST00000462236 C1orf229Q6ZS94 237 aaPredicted RBP7.41□□□□□ -1.22
COPS3-204ENST00000462236 ZNF428Q96B54 188 aa7.41□□□□□ -1.22
COPS3-204ENST00000462236 SMG9Q9H0W8 520 aaKnown RBP7.41□□□□□ -1.22
COPS3-204ENST00000462236 MUC3BQ9H195 1237 aa7.41□□□□□ -1.22
COPS3-204ENST00000462236 ABCB6Q9NP58 842 aa7.41□□□□□ -1.22
COPS3-204ENST00000462236 VTI1BQ9UEU0 232 aa7.41□□□□□ -1.22
COPS3-204ENST00000462236 STARD13Q9Y3M8 1113 aa7.41□□□□□ -1.22
COPS3-204ENST00000462236 ATRNO75882 1429 aa7.41□□□□□ -1.22
COPS3-204ENST00000462236 ST13P50502 369 aaKnown RBP7.4□□□□□ -1.22
COPS3-204ENST00000462236 ATP11AP98196 1134 aa7.4□□□□□ -1.22
COPS3-204ENST00000462236 CEP135Q66GS9 1140 aa7.4□□□□□ -1.22
COPS3-204ENST00000462236 LYPD4Q6UWN0 246 aa7.4□□□□□ -1.22
COPS3-204ENST00000462236 BSNDQ8WZ55 320 aa7.4□□□□□ -1.22
COPS3-204ENST00000462236 POP1Q99575 1024 aaKnown RBP7.4□□□□□ -1.22
COPS3-204ENST00000462236 RRP7BPQ9NSQ0 103 aa7.4□□□□□ -1.22
COPS3-204ENST00000462236 VPS8Q8N3P4 1428 aa7.4□□□□□ -1.22
COPS3-204ENST00000462236 PIK3R2O00459 728 aa7.39□□□□□ -1.23
COPS3-204ENST00000462236 LILRB5O75023 590 aa7.39□□□□□ -1.23
COPS3-204ENST00000462236 ATF3P18847 181 aa7.39□□□□□ -1.23
COPS3-204ENST00000462236 LRRC59Q96AG4 307 aaKnown RBP7.39□□□□□ -1.23
COPS3-204ENST00000462236 PTCH1Q13635 1447 aa7.38□□□□□ -1.23
COPS3-204ENST00000462236 ADGRL3Q9HAR2 1447 aa7.38□□□□□ -1.23
COPS3-204ENST00000462236 USP31Q70CQ4 1352 aa7.38□□□□□ -1.23
COPS3-204ENST00000462236 A0A096LPE4 126 aa7.38□□□□□ -1.23
COPS3-204ENST00000462236 A0A1W2PPZ6 126 aa7.38□□□□□ -1.23
COPS3-204ENST00000462236 USP17L7P0C7H9 530 aa7.38□□□□□ -1.23
COPS3-204ENST00000462236 ACPPP15309 386 aa7.38□□□□□ -1.23
COPS3-204ENST00000462236 GRIK5Q16478 980 aa7.38□□□□□ -1.23
COPS3-204ENST00000462236 ZNF385CQ66K41 422 aaPredicted RBP7.38□□□□□ -1.23
COPS3-204ENST00000462236 DTHD1Q6ZMT9 781 aa7.38□□□□□ -1.23
COPS3-204ENST00000462236 C3orf58Q8NDZ4 430 aa7.38□□□□□ -1.23
COPS3-204ENST00000462236 FAM161BQ96MY7 647 aa7.38□□□□□ -1.23
COPS3-204ENST00000462236 JPH1Q9HDC5 661 aaPredicted RBP7.38□□□□□ -1.23
COPS3-204ENST00000462236 METTL5Q9NRN9 209 aaKnown RBP7.38□□□□□ -1.23
COPS3-204ENST00000462236 RNF19AQ9NV58 838 aa7.38□□□□□ -1.23
COPS3-204ENST00000462236 ANKRD30AQ9BXX3 1397 aa7.37□□□□□ -1.23
COPS3-204ENST00000462236 SHISA8B8ZZ34 492 aa7.37□□□□□ -1.23
COPS3-204ENST00000462236 M0R082 166 aa7.37□□□□□ -1.23
COPS3-204ENST00000462236 SCAMP3O14828 347 aaKnown RBP7.37□□□□□ -1.23
COPS3-204ENST00000462236 ALBP02768 609 aa7.37□□□□□ -1.23
COPS3-204ENST00000462236 AMPD1P23109 780 aa7.37□□□□□ -1.23
COPS3-204ENST00000462236 CDC27P30260 824 aa7.37□□□□□ -1.23
COPS3-204ENST00000462236 GRIA4P48058 902 aa7.37□□□□□ -1.23
COPS3-204ENST00000462236 AFF1P51825 1210 aaKnown RBP7.37□□□□□ -1.23
COPS3-204ENST00000462236 CABP4P57796 275 aa7.37□□□□□ -1.23
COPS3-204ENST00000462236 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.37□□□□□ -1.23
COPS3-204ENST00000462236 ZNF417Q8TAU3 575 aa7.37□□□□□ -1.23
COPS3-204ENST00000462236 WNT8BQ93098 351 aa7.37□□□□□ -1.23
COPS3-204ENST00000462236 C8orf37Q96NL8 207 aa7.37□□□□□ -1.23
COPS3-204ENST00000462236 ZNF587Q96SQ5 575 aaPredicted RBP7.37□□□□□ -1.23
COPS3-204ENST00000462236 BACH2Q9BYV9 841 aa7.37□□□□□ -1.23
COPS3-204ENST00000462236 SRA1Q9HD15 236 aaKnown RBP7.37□□□□□ -1.23
COPS3-204ENST00000462236 SOX13Q9UN79 622 aa7.37□□□□□ -1.23
COPS3-204ENST00000462236 GLI3P10071 1580 aa7.37□□□□□ -1.23
COPS3-204ENST00000462236 MYOM2P54296 1465 aa7.36□□□□□ -1.23
COPS3-204ENST00000462236 BCL9LQ86UU0 1499 aa7.36□□□□□ -1.23
COPS3-204ENST00000462236 ARHGEF15O94989 841 aa7.36□□□□□ -1.23
COPS3-204ENST00000462236 RECKO95980 971 aa7.36□□□□□ -1.23
COPS3-204ENST00000462236 CTSHP09668 335 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms