RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 SF3B3Q15393 1217 aaKnown RBP7.6□□□□□ -1.19
SMARCC1-204ENST00000462198 PODNQ7Z5L7 613 aa7.6□□□□□ -1.19
SMARCC1-204ENST00000462198 U2AF1L4Q8WU68 220 aaKnown RBP7.6□□□□□ -1.19
SMARCC1-204ENST00000462198 SYMPKQ92797 1274 aaKnown RBP7.6□□□□□ -1.19
SMARCC1-204ENST00000462198 ZNF428Q96B54 188 aa7.6□□□□□ -1.19
SMARCC1-204ENST00000462198 GUCD1Q96NT3 240 aa7.6□□□□□ -1.19
SMARCC1-204ENST00000462198 DEFB129Q9H1M3 183 aa7.6□□□□□ -1.19
SMARCC1-204ENST00000462198 POLR3EQ9NVU0 708 aa7.6□□□□□ -1.19
SMARCC1-204ENST00000462198 BIN2Q9UBW5 565 aaPredicted RBP7.6□□□□□ -1.19
SMARCC1-204ENST00000462198 GGA1Q9UJY5 639 aa7.6□□□□□ -1.19
SMARCC1-204ENST00000462198 TFRCP02786 760 aaKnown RBP7.59□□□□□ -1.19
SMARCC1-204ENST00000462198 IRF5Q13568 498 aa7.59□□□□□ -1.19
SMARCC1-204ENST00000462198 SUPT20HL1Q3ZLR7 823 aa7.59□□□□□ -1.19
SMARCC1-204ENST00000462198 TDHQ8IZJ6 230 aa7.59□□□□□ -1.19
SMARCC1-204ENST00000462198 BRI3BPQ8WY22 251 aa7.59□□□□□ -1.19
SMARCC1-204ENST00000462198 TRIM47Q96LD4 638 aa7.59□□□□□ -1.19
SMARCC1-204ENST00000462198 SNRKQ9NRH2 765 aa7.59□□□□□ -1.19
SMARCC1-204ENST00000462198 RIPOR2Q9Y4F9 1068 aa7.59□□□□□ -1.19
SMARCC1-204ENST00000462198 LAS1LQ9Y4W2 734 aaKnown RBP7.59□□□□□ -1.19
SMARCC1-204ENST00000462198 IRS2Q9Y4H2 1338 aa7.58□□□□□ -1.2
SMARCC1-204ENST00000462198 TLR2O60603 784 aa7.58□□□□□ -1.2
SMARCC1-204ENST00000462198 WDHD1O75717 1129 aaPredicted RBP7.58□□□□□ -1.2
SMARCC1-204ENST00000462198 HOXD10P28358 340 aa7.58□□□□□ -1.2
SMARCC1-204ENST00000462198 RFC5P40937 340 aa7.58□□□□□ -1.2
SMARCC1-204ENST00000462198 IREB2P48200 963 aaKnown RBP7.58□□□□□ -1.2
SMARCC1-204ENST00000462198 CLK2P49760 499 aaKnown RBP7.58□□□□□ -1.2
SMARCC1-204ENST00000462198 MMP14P50281 582 aa7.58□□□□□ -1.2
SMARCC1-204ENST00000462198 EIF4A1P60842 406 aaKnown RBP7.58□□□□□ -1.2
SMARCC1-204ENST00000462198 UBXN2AP68543 259 aa7.58□□□□□ -1.2
SMARCC1-204ENST00000462198 CCDC27Q2M243 656 aa7.58□□□□□ -1.2
SMARCC1-204ENST00000462198 HSP90AB3PQ58FF7 597 aa7.58□□□□□ -1.2
SMARCC1-204ENST00000462198 DACT2Q5SW24 774 aa7.58□□□□□ -1.2
SMARCC1-204ENST00000462198 PPP2R2DQ66LE6 453 aa7.58□□□□□ -1.2
SMARCC1-204ENST00000462198 FAM109BQ6ICB4 259 aaPredicted RBP7.58□□□□□ -1.2
SMARCC1-204ENST00000462198 METTL3Q86U44 580 aaKnown RBP7.58□□□□□ -1.2
SMARCC1-204ENST00000462198 WWC1Q8IX03 1113 aa7.58□□□□□ -1.2
SMARCC1-204ENST00000462198 ANKRD13AQ8IZ07 590 aa7.58□□□□□ -1.2
SMARCC1-204ENST00000462198 FAM43AQ8N2R8 423 aa7.58□□□□□ -1.2
SMARCC1-204ENST00000462198 RAET1EQ8TD07 263 aa7.58□□□□□ -1.2
SMARCC1-204ENST00000462198 OPTNQ96CV9 577 aa7.58□□□□□ -1.2
SMARCC1-204ENST00000462198 FAM161BQ96MY7 647 aa7.58□□□□□ -1.2
SMARCC1-204ENST00000462198 EPAS1Q99814 870 aa7.58□□□□□ -1.2
SMARCC1-204ENST00000462198 ELP3Q9H9T3 547 aa7.58□□□□□ -1.2
SMARCC1-204ENST00000462198 SRRDQ9UH36 339 aa7.58□□□□□ -1.2
SMARCC1-204ENST00000462198 ZMYND8Q9ULU4 1186 aaPredicted RBP7.58□□□□□ -1.2
SMARCC1-204ENST00000462198 ALPK3Q96L96 1907 aa7.58□□□□□ -1.2
SMARCC1-204ENST00000462198 CACNA1FO60840 1977 aa7.57□□□□□ -1.2
SMARCC1-204ENST00000462198 CCL15-CCL14A0A0B4J2E2 113 aa7.57□□□□□ -1.2
SMARCC1-204ENST00000462198 TNFRSF10AO00220 468 aa7.57□□□□□ -1.2
SMARCC1-204ENST00000462198 SYN1P17600 705 aa7.57□□□□□ -1.2
SMARCC1-204ENST00000462198 CTGFP29279 349 aa7.57□□□□□ -1.2
SMARCC1-204ENST00000462198 PSMC4P43686 418 aa7.57□□□□□ -1.2
SMARCC1-204ENST00000462198 GTF2A2P52657 109 aa7.57□□□□□ -1.2
SMARCC1-204ENST00000462198 GNAI1P63096 354 aa7.57□□□□□ -1.2
SMARCC1-204ENST00000462198 AIMP1Q12904 312 aaKnown RBP7.57□□□□□ -1.2
SMARCC1-204ENST00000462198 CCL15Q16663 113 aa7.57□□□□□ -1.2
SMARCC1-204ENST00000462198 NBPF12Q5TAG4 269 aaPredicted RBP7.57□□□□□ -1.2
SMARCC1-204ENST00000462198 LRP10Q7Z4F1 713 aa7.57□□□□□ -1.2
SMARCC1-204ENST00000462198 C7orf61Q8IZ16 206 aa7.57□□□□□ -1.2
SMARCC1-204ENST00000462198 FBXW7Q969H0 707 aa7.57□□□□□ -1.2
SMARCC1-204ENST00000462198 FAM89AQ96GI7 184 aa7.57□□□□□ -1.2
SMARCC1-204ENST00000462198 ZBED3Q96IU2 234 aaPredicted RBP7.57□□□□□ -1.2
SMARCC1-204ENST00000462198 PAWRQ96IZ0 340 aaKnown RBP7.57□□□□□ -1.2
SMARCC1-204ENST00000462198 UBE2OQ9C0C9 1292 aaKnown RBP7.57□□□□□ -1.2
SMARCC1-204ENST00000462198 UNC93B1Q9H1C4 597 aa7.57□□□□□ -1.2
SMARCC1-204ENST00000462198 TSPYL4Q9UJ04 414 aa7.57□□□□□ -1.2
SMARCC1-204ENST00000462198 PRUNE2Q8WUY3 3088 aa7.56□□□□□ -1.2
SMARCC1-204ENST00000462198 FMNL1O95466 1100 aaPredicted RBP7.56□□□□□ -1.2
SMARCC1-204ENST00000462198 ANXA1P04083 346 aa7.56□□□□□ -1.2
SMARCC1-204ENST00000462198 CAPN2P17655 700 aa7.56□□□□□ -1.2
SMARCC1-204ENST00000462198 EIF2S2P20042 333 aaKnown RBP7.56□□□□□ -1.2
SMARCC1-204ENST00000462198 MAGEA10P43363 369 aaPredicted RBP7.56□□□□□ -1.2
SMARCC1-204ENST00000462198 HNRNPUQ00839 825 aaKnown RBP eCLIP7.56□□□□□ -1.2
SMARCC1-204ENST00000462198 PROX2Q3B8N5 592 aa7.56□□□□□ -1.2
SMARCC1-204ENST00000462198 TMCO4Q5TGY1 634 aa7.56□□□□□ -1.2
SMARCC1-204ENST00000462198 STRIP1Q5VSL9 837 aa7.56□□□□□ -1.2
SMARCC1-204ENST00000462198 COPS6Q7L5N1 327 aa7.56□□□□□ -1.2
SMARCC1-204ENST00000462198 KIAA0825Q8IV33 1275 aa7.56□□□□□ -1.2
SMARCC1-204ENST00000462198 HELBQ8NG08 1087 aaPredicted RBP7.56□□□□□ -1.2
SMARCC1-204ENST00000462198 ZFRQ96KR1 1074 aaKnown RBP7.56□□□□□ -1.2
SMARCC1-204ENST00000462198 PRKD2Q9BZL6 878 aa7.56□□□□□ -1.2
SMARCC1-204ENST00000462198 SEC31BQ9NQW1 1179 aa7.56□□□□□ -1.2
SMARCC1-204ENST00000462198 IFT57Q9NWB7 429 aa7.56□□□□□ -1.2
SMARCC1-204ENST00000462198 BABAM1Q9NWV8 329 aa7.56□□□□□ -1.2
SMARCC1-204ENST00000462198 COL4A1P02462 1669 aa7.56□□□□□ -1.2
SMARCC1-204ENST00000462198 MYO3BQ8WXR4 1341 aa7.55□□□□□ -1.2
SMARCC1-204ENST00000462198 TMEM265A0A087WTH1 108 aa7.55□□□□□ -1.2
SMARCC1-204ENST00000462198 CHL1O00533 1208 aa7.55□□□□□ -1.2
SMARCC1-204ENST00000462198 MAP3K7O43318 606 aa7.55□□□□□ -1.2
SMARCC1-204ENST00000462198 ATP2B4P23634 1241 aa7.55□□□□□ -1.2
SMARCC1-204ENST00000462198 PDE4CQ08493 712 aa7.55□□□□□ -1.2
SMARCC1-204ENST00000462198 MAP3K12Q12852 859 aa7.55□□□□□ -1.2
SMARCC1-204ENST00000462198 DLGAP5Q15398 846 aa7.55□□□□□ -1.2
SMARCC1-204ENST00000462198 PROSER3Q2NL68 480 aa7.55□□□□□ -1.2
SMARCC1-204ENST00000462198 TMEM259Q4ZIN3 620 aa7.55□□□□□ -1.2
SMARCC1-204ENST00000462198 RTL5Q5HYW3 569 aaPredicted RBP7.55□□□□□ -1.2
SMARCC1-204ENST00000462198 TTLL5Q6EMB2 1281 aa7.55□□□□□ -1.2
SMARCC1-204ENST00000462198 C17orf99Q6UX52 265 aa7.55□□□□□ -1.2
SMARCC1-204ENST00000462198 NECAB2Q7Z6G3 386 aa7.55□□□□□ -1.2
SMARCC1-204ENST00000462198 WDR63Q8IWG1 891 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 540.7 ms