RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 DDX4Q9NQI0 724 aaKnown RBP12.84□□□□□ -0.35
TRAPPC12-213ENST00000461577 CSADQ9Y600 493 aa12.84□□□□□ -0.35
TRAPPC12-213ENST00000461577 RFX7Q2KHR2 1363 aa12.83□□□□□ -0.36
TRAPPC12-213ENST00000461577 ERC2O15083 957 aa12.83□□□□□ -0.36
TRAPPC12-213ENST00000461577 NPM3O75607 178 aaKnown RBP12.83□□□□□ -0.36
TRAPPC12-213ENST00000461577 PDE6AP16499 860 aa12.83□□□□□ -0.36
TRAPPC12-213ENST00000461577 DYNLL1P63167 89 aaKnown RBP12.83□□□□□ -0.36
TRAPPC12-213ENST00000461577 MKRN3Q13064 507 aaKnown RBP12.83□□□□□ -0.36
TRAPPC12-213ENST00000461577 SLC9C2Q5TAH2 1124 aa12.83□□□□□ -0.36
TRAPPC12-213ENST00000461577 TSHZ3Q63HK5 1081 aa12.83□□□□□ -0.36
TRAPPC12-213ENST00000461577 MIGA2Q7L4E1 593 aa12.83□□□□□ -0.36
TRAPPC12-213ENST00000461577 MIGA1Q8NAN2 632 aa12.83□□□□□ -0.36
TRAPPC12-213ENST00000461577 TGFBRAP1Q8WUH2 860 aa12.83□□□□□ -0.36
TRAPPC12-213ENST00000461577 CLMNQ96JQ2 1002 aa12.83□□□□□ -0.36
TRAPPC12-213ENST00000461577 WRNIP1Q96S55 665 aa12.83□□□□□ -0.36
TRAPPC12-213ENST00000461577 CSRNP1Q96S65 589 aa12.83□□□□□ -0.36
TRAPPC12-213ENST00000461577 WBP1LQ9NX94 342 aa12.83□□□□□ -0.36
TRAPPC12-213ENST00000461577 MYH7P12883 1935 aa12.83□□□□□ -0.36
TRAPPC12-213ENST00000461577 OTOFQ9HC10 1997 aa12.83□□□□□ -0.36
TRAPPC12-213ENST00000461577 TTC41PQ6P2S7 1318 aa12.83□□□□□ -0.36
TRAPPC12-213ENST00000461577 CDK5RAP2Q96SN8 1893 aa12.82□□□□□ -0.36
TRAPPC12-213ENST00000461577 IGHDP01880 384 aa12.82□□□□□ -0.36
TRAPPC12-213ENST00000461577 B4GALNT3Q6L9W6 998 aa12.82□□□□□ -0.36
TRAPPC12-213ENST00000461577 ZSCAN25Q6NSZ9 544 aa12.82□□□□□ -0.36
TRAPPC12-213ENST00000461577 REM2Q8IYK8 340 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC12-213ENST00000461577 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.82□□□□□ -0.36
TRAPPC12-213ENST00000461577 ZIC5Q96T25 663 aa12.82□□□□□ -0.36
TRAPPC12-213ENST00000461577 OSBPL5Q9H0X9 879 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC12-213ENST00000461577 ELP3Q9H9T3 547 aa12.82□□□□□ -0.36
TRAPPC12-213ENST00000461577 ZNF532Q9HCE3 1301 aa12.82□□□□□ -0.36
TRAPPC12-213ENST00000461577 FOCADQ5VW36 1801 aa12.81□□□□□ -0.36
TRAPPC12-213ENST00000461577 MAGEB6P1A0A0J9YX57 407 aa12.81□□□□□ -0.36
TRAPPC12-213ENST00000461577 DDTLA6NHG4 134 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC12-213ENST00000461577 GLRX3O76003 335 aaKnown RBP12.81□□□□□ -0.36
TRAPPC12-213ENST00000461577 MX1P20591 662 aa12.81□□□□□ -0.36
TRAPPC12-213ENST00000461577 USP5P45974 858 aa12.81□□□□□ -0.36
TRAPPC12-213ENST00000461577 SPRYD7Q5W111 196 aa12.81□□□□□ -0.36
TRAPPC12-213ENST00000461577 SH3BP5LQ7L8J4 393 aa12.81□□□□□ -0.36
TRAPPC12-213ENST00000461577 MAPKAPK5Q8IW41 473 aa12.81□□□□□ -0.36
TRAPPC12-213ENST00000461577 SMC5Q8IY18 1101 aa12.81□□□□□ -0.36
TRAPPC12-213ENST00000461577 OTUD7AQ8TE49 926 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC12-213ENST00000461577 WNK4Q96J92 1243 aa12.81□□□□□ -0.36
TRAPPC12-213ENST00000461577 LNPKQ9C0E8 428 aa12.81□□□□□ -0.36
TRAPPC12-213ENST00000461577 FOXN1O15353 648 aa12.8□□□□□ -0.36
TRAPPC12-213ENST00000461577 ZBTB48P10074 688 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC12-213ENST00000461577 ADD2P35612 726 aa12.8□□□□□ -0.36
TRAPPC12-213ENST00000461577 CTCFP49711 727 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC12-213ENST00000461577 VGLL4Q14135 290 aa12.8□□□□□ -0.36
TRAPPC12-213ENST00000461577 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC12-213ENST00000461577 OPTNQ96CV9 577 aa12.8□□□□□ -0.36
TRAPPC12-213ENST00000461577 FLT1P17948 1338 aa12.8□□□□□ -0.36
TRAPPC12-213ENST00000461577 MYH1P12882 1939 aa12.8□□□□□ -0.36
TRAPPC12-213ENST00000461577 COL2A1P02458 1487 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC12-213ENST00000461577 TCRBV5S4A2TA0A5A2 114 aa12.79□□□□□ -0.36
TRAPPC12-213ENST00000461577 MANSC4A6NHS7 340 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC12-213ENST00000461577 CA12O43570 354 aa12.79□□□□□ -0.36
TRAPPC12-213ENST00000461577 SREBF2Q12772 1141 aa12.79□□□□□ -0.36
TRAPPC12-213ENST00000461577 LRRFIP1Q32MZ4 808 aaKnown RBP12.79□□□□□ -0.36
TRAPPC12-213ENST00000461577 KBTBD3Q8NAB2 608 aa12.79□□□□□ -0.36
TRAPPC12-213ENST00000461577 PI4K2BQ8TCG2 481 aa12.79□□□□□ -0.36
TRAPPC12-213ENST00000461577 ZKSCAN4Q969J2 545 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC12-213ENST00000461577 CRNKL1Q9BZJ0 848 aaKnown RBP12.79□□□□□ -0.36
TRAPPC12-213ENST00000461577 DHX36Q9H2U1 1008 aaKnown RBP12.79□□□□□ -0.36
TRAPPC12-213ENST00000461577 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.79□□□□□ -0.362e-6■■■■■ 28.1
TRAPPC12-213ENST00000461577 SAP30BPQ9UHR5 308 aaKnown RBP12.79□□□□□ -0.36
TRAPPC12-213ENST00000461577 ZNF112Q9UJU3 913 aa12.79□□□□□ -0.36
TRAPPC12-213ENST00000461577 ATRNL1Q5VV63 1379 aa12.79□□□□□ -0.36
TRAPPC12-213ENST00000461577 INPP5BP32019 993 aa12.78□□□□□ -0.36
TRAPPC12-213ENST00000461577 UBE3CQ15386 1083 aa12.78□□□□□ -0.36
TRAPPC12-213ENST00000461577 CHD1LQ86WJ1 897 aa12.78□□□□□ -0.36
TRAPPC12-213ENST00000461577 RIOK1Q9BRS2 568 aaKnown RBP12.78□□□□□ -0.36
TRAPPC12-213ENST00000461577 TRIM34Q9BYJ4 488 aa12.78□□□□□ -0.36
TRAPPC12-213ENST00000461577 PI4KBQ9UBF8 816 aa12.78□□□□□ -0.36
TRAPPC12-213ENST00000461577 SNCAIPQ9Y6H5 919 aa12.78□□□□□ -0.36
TRAPPC12-213ENST00000461577 SALL3Q9BXA9 1300 aa12.78□□□□□ -0.36
TRAPPC12-213ENST00000461577 NAV1Q8NEY1 1877 aa12.77□□□□□ -0.37
TRAPPC12-213ENST00000461577 TBC1D12O60347 775 aa12.77□□□□□ -0.37
TRAPPC12-213ENST00000461577 HLA-DOAP06340 250 aa12.77□□□□□ -0.37
TRAPPC12-213ENST00000461577 ZFYP08048 801 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC12-213ENST00000461577 HSPA8P11142 646 aaKnown RBP12.77□□□□□ -0.37
TRAPPC12-213ENST00000461577 GJA5P36382 358 aa12.77□□□□□ -0.37
TRAPPC12-213ENST00000461577 TM4SF4P48230 202 aa12.77□□□□□ -0.37
TRAPPC12-213ENST00000461577 PDE1AP54750 535 aa12.77□□□□□ -0.37
TRAPPC12-213ENST00000461577 INHBEP58166 350 aa12.77□□□□□ -0.37
TRAPPC12-213ENST00000461577 MAP3K10Q02779 954 aa12.77□□□□□ -0.37
TRAPPC12-213ENST00000461577 NUCB1Q02818 461 aa12.77□□□□□ -0.37
TRAPPC12-213ENST00000461577 SLFNL1Q499Z3 407 aa12.77□□□□□ -0.37
TRAPPC12-213ENST00000461577 NOL9Q5SY16 702 aaKnown RBP12.77□□□□□ -0.37
TRAPPC12-213ENST00000461577 ERO1BQ86YB8 467 aa12.77□□□□□ -0.37
TRAPPC12-213ENST00000461577 LCORLQ8N3X6 602 aa12.77□□□□□ -0.37
TRAPPC12-213ENST00000461577 CRACR2BQ8N4Y2 399 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC12-213ENST00000461577 OTUD5Q96G74 571 aa12.77□□□□□ -0.37
TRAPPC12-213ENST00000461577 FSD1Q9BTV5 496 aa12.77□□□□□ -0.37
TRAPPC12-213ENST00000461577 PICK1Q9NRD5 415 aa12.77□□□□□ -0.37
TRAPPC12-213ENST00000461577 STAP2Q9UGK3 403 aa12.77□□□□□ -0.37
TRAPPC12-213ENST00000461577 PALD1Q9ULE6 856 aa12.77□□□□□ -0.37
TRAPPC12-213ENST00000461577 SPDYE5A6NIY4 337 aa12.76□□□□□ -0.37
TRAPPC12-213ENST00000461577 FAM196BA6NMK8 535 aa12.76□□□□□ -0.37
TRAPPC12-213ENST00000461577 PHF20L1A8MW92 1017 aa12.76□□□□□ -0.37
TRAPPC12-213ENST00000461577 RNF113AO15541 343 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms