RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 PTPRFP10586 1907 aa19.08■□□□□ 0.64
NUP50-213ENST00000461437 ATRNL1Q5VV63 1379 aa19.07■□□□□ 0.64
NUP50-213ENST00000461437 SIPA1L1O43166 1804 aa19.07■□□□□ 0.64
NUP50-213ENST00000461437 GTF2A2P52657 109 aa19.07■□□□□ 0.64
NUP50-213ENST00000461437 RHBDL3P58872 404 aa19.07■□□□□ 0.64
NUP50-213ENST00000461437 EAF2Q96CJ1 260 aaPredicted RBP19.07■□□□□ 0.64
NUP50-213ENST00000461437 IDI2Q9BXS1 227 aa19.07■□□□□ 0.64
NUP50-213ENST00000461437 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.07■□□□□ 0.64
NUP50-213ENST00000461437 NOP58Q9Y2X3 529 aaKnown RBP19.07■□□□□ 0.64
NUP50-213ENST00000461437 FOCADQ5VW36 1801 aa19.07■□□□□ 0.64
NUP50-213ENST00000461437 GPR75-ASB3A0A0A6YYF3 556 aa19.06■□□□□ 0.64
NUP50-213ENST00000461437 FAM196BA6NMK8 535 aa19.06■□□□□ 0.64
NUP50-213ENST00000461437 ECM2O94769 699 aaPredicted RBP19.06■□□□□ 0.64
NUP50-213ENST00000461437 UQCRFS1P1P0C7P4 283 aa19.06■□□□□ 0.64
NUP50-213ENST00000461437 TAF1CQ15572 869 aaPredicted RBP19.06■□□□□ 0.64
NUP50-213ENST00000461437 NOM1Q5C9Z4 860 aaKnown RBP19.06■□□□□ 0.64
NUP50-213ENST00000461437 OTUD7BQ6GQQ9 843 aa19.06■□□□□ 0.64
NUP50-213ENST00000461437 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.06■□□□□ 0.64
NUP50-213ENST00000461437 HOOK2Q96ED9 719 aa19.06■□□□□ 0.64
NUP50-213ENST00000461437 FAM163AQ96GL9 167 aaPredicted RBP19.06■□□□□ 0.64
NUP50-213ENST00000461437 BCL11AQ9H165 835 aa19.06■□□□□ 0.64
NUP50-213ENST00000461437 GPR108Q9NPR9 543 aa19.06■□□□□ 0.64
NUP50-213ENST00000461437 LRP2BPQ9P2M1 347 aa19.06■□□□□ 0.64
NUP50-213ENST00000461437 ZNF112Q9UJU3 913 aa19.06■□□□□ 0.64
NUP50-213ENST00000461437 TRIM17Q9Y577 477 aa19.06■□□□□ 0.64
NUP50-213ENST00000461437 BTBD19C9JJ37 291 aa19.05■□□□□ 0.64
NUP50-213ENST00000461437 APBB1O00213 710 aa19.05■□□□□ 0.64
NUP50-213ENST00000461437 ENTPD3O75355 529 aa19.05■□□□□ 0.64
NUP50-213ENST00000461437 CYP2E1P05181 493 aaPredicted RBP19.05■□□□□ 0.64
NUP50-213ENST00000461437 ZAP70P43403 619 aa19.05■□□□□ 0.64
NUP50-213ENST00000461437 PPIL2Q13356 520 aa19.05■□□□□ 0.64
NUP50-213ENST00000461437 CCDC84Q86UT8 332 aaPredicted RBP19.05■□□□□ 0.64
NUP50-213ENST00000461437 SLF2Q8IX21 1173 aa19.05■□□□□ 0.64
NUP50-213ENST00000461437 PIH1D3Q9NQM4 214 aaKnown RBP19.05■□□□□ 0.64
NUP50-213ENST00000461437 CCDC158Q5M9N0 1113 aa19.04■□□□□ 0.64
NUP50-213ENST00000461437 C20orf194Q5TEA3 1177 aa19.04■□□□□ 0.64
NUP50-213ENST00000461437 OTOP1Q7RTM1 612 aa19.04■□□□□ 0.64
NUP50-213ENST00000461437 ADGRA1Q86SQ6 560 aa19.04■□□□□ 0.64
NUP50-213ENST00000461437 SH3RF3Q8TEJ3 882 aaPredicted RBP19.04■□□□□ 0.64
NUP50-213ENST00000461437 IL1RAPL2Q9NP60 686 aa19.04■□□□□ 0.64
NUP50-213ENST00000461437 RCAN3Q9UKA8 241 aa19.04■□□□□ 0.64
NUP50-213ENST00000461437 PHF20L1A8MW92 1017 aa19.03■□□□□ 0.64
NUP50-213ENST00000461437 SNAPC2Q13487 334 aa19.03■□□□□ 0.64
NUP50-213ENST00000461437 FBXO46Q6PJ61 603 aaPredicted RBP19.03■□□□□ 0.64
NUP50-213ENST00000461437 AATFQ9NY61 560 aaKnown RBP eCLIP19.03■□□□□ 0.64
NUP50-213ENST00000461437 CETPP11597 493 aa19.02■□□□□ 0.64
NUP50-213ENST00000461437 GSTO1P78417 241 aa19.02■□□□□ 0.64
NUP50-213ENST00000461437 SP3Q02447 781 aa19.02■□□□□ 0.64
NUP50-213ENST00000461437 PPATQ06203 517 aa19.02■□□□□ 0.64
NUP50-213ENST00000461437 MYH1P12882 1939 aa19.02■□□□□ 0.63
NUP50-213ENST00000461437 HTTP42858 3142 aa19.01■□□□□ 0.63
NUP50-213ENST00000461437 TNRC18O15417 2968 aaPredicted RBP19.01■□□□□ 0.63
NUP50-213ENST00000461437 LDHCP07864 332 aa19.01■□□□□ 0.63
NUP50-213ENST00000461437 PKN2Q16513 984 aaKnown RBP19.01■□□□□ 0.63
NUP50-213ENST00000461437 NOL9Q5SY16 702 aaKnown RBP19.01■□□□□ 0.63
NUP50-213ENST00000461437 NAA16Q6N069 864 aaPredicted RBP19.01■□□□□ 0.63
NUP50-213ENST00000461437 AACSQ86V21 672 aa19.01■□□□□ 0.63
NUP50-213ENST00000461437 SIRT2Q8IXJ6 389 aa19.01■□□□□ 0.63
NUP50-213ENST00000461437 TEX11Q8IYF3 940 aa19.01■□□□□ 0.63
NUP50-213ENST00000461437 ZFYVE28Q9HCC9 887 aa19.01■□□□□ 0.63
NUP50-213ENST00000461437 MOGSQ13724 837 aa19■□□□□ 0.63
NUP50-213ENST00000461437 ERO1AQ96HE7 468 aa19■□□□□ 0.63
NUP50-213ENST00000461437 ARHGAP39Q9C0H5 1083 aa19■□□□□ 0.63
NUP50-213ENST00000461437 ANTXR1Q9H6X2 564 aa19■□□□□ 0.63
NUP50-213ENST00000461437 CENPFP49454 3210 aa19■□□□□ 0.63
NUP50-213ENST00000461437 DYNLL1P63167 89 aaKnown RBP18.99■□□□□ 0.63
NUP50-213ENST00000461437 SLC4A8Q2Y0W8 1093 aa18.99■□□□□ 0.63
NUP50-213ENST00000461437 SCYL3Q8IZE3 742 aa18.99■□□□□ 0.63
NUP50-213ENST00000461437 OSBPL5Q9H0X9 879 aaPredicted RBP18.99■□□□□ 0.63
NUP50-213ENST00000461437 ZBTB40Q9NUA8 1239 aa18.99■□□□□ 0.63
NUP50-213ENST00000461437 DDX19BQ9UMR2 479 aa18.99■□□□□ 0.63
NUP50-213ENST00000461437 KCNH4Q9UQ05 1017 aa18.99■□□□□ 0.63
NUP50-213ENST00000461437 MGAMO43451 1857 aa18.99■□□□□ 0.63
NUP50-213ENST00000461437 RRP1BQ14684 758 aaKnown RBP18.98■□□□□ 0.63
NUP50-213ENST00000461437 MAPKAPK5Q8IW41 473 aa18.98■□□□□ 0.63
NUP50-213ENST00000461437 RHPN1Q8TCX5 695 aa18.98■□□□□ 0.63
NUP50-213ENST00000461437 EFCC1Q9HA90 598 aa18.98■□□□□ 0.63
NUP50-213ENST00000461437 CPA4Q9UI42 421 aa18.98■□□□□ 0.63
NUP50-213ENST00000461437 ZHX2Q9Y6X8 837 aa18.98■□□□□ 0.63
NUP50-213ENST00000461437 PDHXO00330 501 aa18.97■□□□□ 0.63
NUP50-213ENST00000461437 IDH1O75874 414 aaKnown RBP18.97■□□□□ 0.63
NUP50-213ENST00000461437 MS4A1P11836 297 aa18.97■□□□□ 0.63
NUP50-213ENST00000461437 PTPRAP18433 802 aa18.97■□□□□ 0.63
NUP50-213ENST00000461437 TGFBRAP1Q8WUH2 860 aa18.97■□□□□ 0.63
NUP50-213ENST00000461437 ZNF512BQ96KM6 892 aaPredicted RBP18.97■□□□□ 0.63
NUP50-213ENST00000461437 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.97■□□□□ 0.63
NUP50-213ENST00000461437 PICK1Q9NRD5 415 aa18.97■□□□□ 0.63
NUP50-213ENST00000461437 PTPN22Q9Y2R2 807 aa18.97■□□□□ 0.63
NUP50-213ENST00000461437 TLR2O60603 784 aa18.96■□□□□ 0.63
NUP50-213ENST00000461437 CYP7A1P22680 504 aa18.96■□□□□ 0.63
NUP50-213ENST00000461437 MAP3K10Q02779 954 aa18.96■□□□□ 0.63
NUP50-213ENST00000461437 GPAT2Q6NUI2 795 aa18.96■□□□□ 0.63
NUP50-213ENST00000461437 ERC1Q8IUD2 1116 aa18.96■□□□□ 0.63
NUP50-213ENST00000461437 MIGA1Q8NAN2 632 aa18.96■□□□□ 0.63
NUP50-213ENST00000461437 NOL10Q9BSC4 688 aaKnown RBP18.96■□□□□ 0.63
NUP50-213ENST00000461437 SAP30BPQ9UHR5 308 aaKnown RBP18.96■□□□□ 0.63
NUP50-213ENST00000461437 KIAA0100Q14667 2235 aaKnown RBP18.96■□□□□ 0.63
NUP50-213ENST00000461437 CYP2C8P10632 490 aa18.95■□□□□ 0.62
NUP50-213ENST00000461437 CTGFP29279 349 aa18.95■□□□□ 0.62
NUP50-213ENST00000461437 SHROOM1Q2M3G4 852 aaPredicted RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms