RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 NR1I2O75469 434 aa23.57■■□□□ 1.36
CCM2-203ENST00000461377 KIF23Q02241 960 aaPredicted RBP23.57■■□□□ 1.36
CCM2-203ENST00000461377 CRY2Q49AN0 593 aa23.57■■□□□ 1.36
CCM2-203ENST00000461377 CCDC144CPQ8IYA2 1237 aa23.57■■□□□ 1.36
CCM2-203ENST00000461377 TNMDQ9H2S6 317 aa23.57■■□□□ 1.36
CCM2-203ENST00000461377 GJB4Q9NTQ9 266 aa23.57■■□□□ 1.36
CCM2-203ENST00000461377 STK36Q9NRP7 1315 aa23.57■■□□□ 1.36
CCM2-203ENST00000461377 RANBP6O60518 1105 aaKnown RBP23.56■■□□□ 1.36
CCM2-203ENST00000461377 CCDC192P0DO97 292 aa23.56■■□□□ 1.36
CCM2-203ENST00000461377 PRDX5P30044 214 aa23.56■■□□□ 1.36
CCM2-203ENST00000461377 SYNE3Q6ZMZ3 975 aa23.56■■□□□ 1.36
CCM2-203ENST00000461377 TMTC2Q8N394 836 aa23.56■■□□□ 1.36
CCM2-203ENST00000461377 ANKIB1Q9P2G1 1089 aa23.56■■□□□ 1.36
CCM2-203ENST00000461377 XDHP47989 1333 aa23.56■■□□□ 1.36
CCM2-203ENST00000461377 DUOX1Q9NRD9 1551 aa23.56■■□□□ 1.36
CCM2-203ENST00000461377 ERICH2A1L162 156 aa23.56■■□□□ 1.36
CCM2-203ENST00000461377 SERPINB2P05120 415 aa23.56■■□□□ 1.36
CCM2-203ENST00000461377 RCAN1P53805 252 aa23.56■■□□□ 1.36
CCM2-203ENST00000461377 CAMK4Q16566 473 aa23.56■■□□□ 1.36
CCM2-203ENST00000461377 HS1BP3Q53T59 392 aa23.56■■□□□ 1.36
CCM2-203ENST00000461377 SLC51AQ86UW1 340 aa23.56■■□□□ 1.36
CCM2-203ENST00000461377 STK11IPQ8N1F8 1099 aa23.56■■□□□ 1.36
CCM2-203ENST00000461377 ESR2Q92731 530 aa23.56■■□□□ 1.36
CCM2-203ENST00000461377 PHKBQ93100 1093 aa23.56■■□□□ 1.36
CCM2-203ENST00000461377 ZKSCAN3Q9BRR0 538 aa23.56■■□□□ 1.36
CCM2-203ENST00000461377 BRWD3Q6RI45 1802 aa23.56■■□□□ 1.36
CCM2-203ENST00000461377 KIF28PB7ZC32 967 aa23.55■■□□□ 1.36
CCM2-203ENST00000461377 IGSF3O75054 1194 aa23.55■■□□□ 1.36
CCM2-203ENST00000461377 TRIM37O94972 964 aa23.55■■□□□ 1.36
CCM2-203ENST00000461377 IARSP41252 1262 aaKnown RBP23.55■■□□□ 1.36
CCM2-203ENST00000461377 ST5P78524 1137 aa23.55■■□□□ 1.36
CCM2-203ENST00000461377 C15orf52Q6ZUT6 534 aaKnown RBP23.55■■□□□ 1.36
CCM2-203ENST00000461377 RPGRQ92834 1020 aaKnown RBP23.55■■□□□ 1.36
CCM2-203ENST00000461377 AIFM3Q96NN9 605 aa23.55■■□□□ 1.36
CCM2-203ENST00000461377 FGRP09769 529 aa23.54■■□□□ 1.36
CCM2-203ENST00000461377 MYSM1Q5VVJ2 828 aa23.54■■□□□ 1.36
CCM2-203ENST00000461377 SPTY2D1Q68D10 685 aaPredicted RBP23.54■■□□□ 1.36
CCM2-203ENST00000461377 SMIM22K7EJ46 135 aa23.54■■□□□ 1.36
CCM2-203ENST00000461377 PCP11498 1178 aaKnown RBP23.54■■□□□ 1.36
CCM2-203ENST00000461377 IFNAR1P17181 557 aa23.54■■□□□ 1.36
CCM2-203ENST00000461377 CTR9Q6PD62 1173 aa23.54■■□□□ 1.36
CCM2-203ENST00000461377 CCAR1Q8IX12 1150 aaKnown RBP23.54■■□□□ 1.36
CCM2-203ENST00000461377 POLR3EQ9NVU0 708 aa23.54■■□□□ 1.36
CCM2-203ENST00000461377 FMNL1O95466 1100 aaPredicted RBP23.53■■□□□ 1.36
CCM2-203ENST00000461377 POLR3DP05423 398 aaPredicted RBP23.53■■□□□ 1.36
CCM2-203ENST00000461377 SEC23AQ15436 765 aa23.53■■□□□ 1.36
CCM2-203ENST00000461377 KRT40Q6A162 431 aa23.53■■□□□ 1.36
CCM2-203ENST00000461377 TDRD7Q8NHU6 1098 aaKnown RBP23.53■■□□□ 1.36
CCM2-203ENST00000461377 UBAC1Q9BSL1 405 aa23.53■■□□□ 1.36
CCM2-203ENST00000461377 CRNKL1Q9BZJ0 848 aaKnown RBP23.53■■□□□ 1.36
CCM2-203ENST00000461377 AATFQ9NY61 560 aaKnown RBP eCLIP23.53■■□□□ 1.36
CCM2-203ENST00000461377 ECM29Q5VYK3 1845 aa23.53■■□□□ 1.36
CCM2-203ENST00000461377 CYP2D7A0A087X1C5 515 aa23.52■■□□□ 1.36
CCM2-203ENST00000461377 YEATS4O95619 227 aa23.52■■□□□ 1.36
CCM2-203ENST00000461377 SSRP1Q08945 709 aaKnown RBP23.52■■□□□ 1.36
CCM2-203ENST00000461377 RTN1Q16799 776 aa23.52■■□□□ 1.36
CCM2-203ENST00000461377 LINC00301Q8NCQ3 95 aa23.52■■□□□ 1.36
CCM2-203ENST00000461377 TYRO3Q06418 890 aa23.52■■□□□ 1.36
CCM2-203ENST00000461377 WDR66Q8TBY9 1149 aa23.52■■□□□ 1.36
CCM2-203ENST00000461377 GOLPH3LQ9H4A5 285 aa23.52■■□□□ 1.36
CCM2-203ENST00000461377 CLIC4Q9Y696 253 aa23.52■■□□□ 1.36
CCM2-203ENST00000461377 KIAA1551Q9HCM1 1747 aa23.51■■□□□ 1.35
CCM2-203ENST00000461377 TNKSO95271 1327 aa23.51■■□□□ 1.35
CCM2-203ENST00000461377 ME1P48163 572 aa23.51■■□□□ 1.35
CCM2-203ENST00000461377 ZNF654Q8IZM8 581 aa23.51■■□□□ 1.35
CCM2-203ENST00000461377 RBM17Q96I25 401 aaKnown RBP23.51■■□□□ 1.35
CCM2-203ENST00000461377 SLC26A6Q9BXS9 759 aa23.51■■□□□ 1.35
CCM2-203ENST00000461377 DCP1AQ9NPI6 582 aaPredicted RBP23.51■■□□□ 1.35
CCM2-203ENST00000461377 ATP8A2Q9NTI2 1148 aa23.51■■□□□ 1.35
CCM2-203ENST00000461377 JAG2Q9Y219 1238 aa23.51■■□□□ 1.35
CCM2-203ENST00000461377 USP17L12C9JPN9 530 aa23.51■■□□□ 1.35
CCM2-203ENST00000461377 USP17L21D6R901 530 aa23.51■■□□□ 1.35
CCM2-203ENST00000461377 CLCN1P35523 988 aa23.51■■□□□ 1.35
CCM2-203ENST00000461377 GPSM2P81274 684 aa23.51■■□□□ 1.35
CCM2-203ENST00000461377 DDR1Q08345 913 aa23.51■■□□□ 1.35
CCM2-203ENST00000461377 ZNF804AQ7Z570 1209 aa23.51■■□□□ 1.35
CCM2-203ENST00000461377 CKAP2LQ8IYA6 745 aa23.51■■□□□ 1.35
CCM2-203ENST00000461377 KCNG4Q8TDN1 519 aa23.51■■□□□ 1.35
CCM2-203ENST00000461377 PCDHA7Q9UN72 937 aa23.51■■□□□ 1.35
CCM2-203ENST00000461377 MRVI1Q9Y6F6 885 aa23.51■■□□□ 1.35
CCM2-203ENST00000461377 TXNRD1Q16881 649 aa23.5■■□□□ 1.35
CCM2-203ENST00000461377 DZIP1Q86YF9 867 aaKnown RBP23.5■■□□□ 1.35
CCM2-203ENST00000461377 PROM2Q8N271 834 aa23.5■■□□□ 1.35
CCM2-203ENST00000461377 WASF1Q92558 559 aa23.5■■□□□ 1.35
CCM2-203ENST00000461377 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.5■■□□□ 1.35
CCM2-203ENST00000461377 BAZ2AQ9UIF9 1905 aaKnown RBP23.5■■□□□ 1.35
CCM2-203ENST00000461377 CCDC196A0A1B0GTZ2 297 aa23.49■■□□□ 1.35
CCM2-203ENST00000461377 POLRMTO00411 1230 aaKnown RBP23.49■■□□□ 1.35
CCM2-203ENST00000461377 STK38Q15208 465 aa23.49■■□□□ 1.35
CCM2-203ENST00000461377 CCDC73Q6ZRK6 1079 aa23.49■■□□□ 1.35
CCM2-203ENST00000461377 ENGASEQ8NFI3 743 aa23.49■■□□□ 1.35
CCM2-203ENST00000461377 ZSCAN10Q96SZ4 725 aaPredicted RBP23.49■■□□□ 1.35
CCM2-203ENST00000461377 CCDC88AQ3V6T2 1871 aa23.49■■□□□ 1.35
CCM2-203ENST00000461377 A0A1W2PQ27 194 aa23.49■■□□□ 1.35
CCM2-203ENST00000461377 A0A1W2PQ64 194 aa23.49■■□□□ 1.35
CCM2-203ENST00000461377 A0A1W2PQD8 194 aa23.49■■□□□ 1.35
CCM2-203ENST00000461377 HMGB2P26583 209 aaKnown RBP23.49■■□□□ 1.35
CCM2-203ENST00000461377 SNW1Q13573 536 aaKnown RBP23.49■■□□□ 1.35
CCM2-203ENST00000461377 SBK1Q52WX2 424 aa23.49■■□□□ 1.35
CCM2-203ENST00000461377 ADALQ6DHV7 355 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms