RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 ARHGAP27Q6ZUM4 889 aa6.3□□□□□ -1.4
CLK1-206ENST00000461326 ZNF428Q96B54 188 aa6.3□□□□□ -1.4
CLK1-206ENST00000461326 FOXD3Q9UJU5 478 aaPredicted RBP6.3□□□□□ -1.4
CLK1-206ENST00000461326 ADAMTS6Q9UKP5 1117 aa6.3□□□□□ -1.4
CLK1-206ENST00000461326 FAM87AP0C7U9 286 aa6.29□□□□□ -1.4
CLK1-206ENST00000461326 ATP2B2Q01814 1243 aa6.29□□□□□ -1.4
CLK1-206ENST00000461326 MESP2Q0VG99 397 aa6.29□□□□□ -1.4
CLK1-206ENST00000461326 PDE3AQ14432 1141 aa6.29□□□□□ -1.4
CLK1-206ENST00000461326 IFI16Q16666 785 aaKnown RBP6.29□□□□□ -1.4
CLK1-206ENST00000461326 ZNF423Q2M1K9 1284 aa6.29□□□□□ -1.4
CLK1-206ENST00000461326 ZSCAN18Q8TBC5 510 aaPredicted RBP6.29□□□□□ -1.4
CLK1-206ENST00000461326 HRASLS5Q96KN8 279 aa6.29□□□□□ -1.4
CLK1-206ENST00000461326 KRTAP4-5Q9BYR2 181 aa6.29□□□□□ -1.4
CLK1-206ENST00000461326 CCDC87Q9NVE4 849 aa6.29□□□□□ -1.4
CLK1-206ENST00000461326 SYNGAP1Q96PV0 1343 aa6.28□□□□□ -1.4
CLK1-206ENST00000461326 AOC2O75106 756 aa6.28□□□□□ -1.4
CLK1-206ENST00000461326 P4HBP07237 508 aaKnown RBP6.28□□□□□ -1.4
CLK1-206ENST00000461326 RAP1GAPP47736 663 aa6.28□□□□□ -1.4
CLK1-206ENST00000461326 PLCB3Q01970 1234 aa6.28□□□□□ -1.4
CLK1-206ENST00000461326 DSC3Q14574 896 aa6.28□□□□□ -1.4
CLK1-206ENST00000461326 ANGEL2Q5VTE6 544 aaKnown RBP6.28□□□□□ -1.4
CLK1-206ENST00000461326 CCNJLQ8IV13 435 aa6.28□□□□□ -1.4
CLK1-206ENST00000461326 FAM181AQ8N9Y4 354 aa6.28□□□□□ -1.4
CLK1-206ENST00000461326 MRRFQ96E11 262 aaKnown RBP6.28□□□□□ -1.4
CLK1-206ENST00000461326 PIDD1Q9HB75 910 aa6.28□□□□□ -1.4
CLK1-206ENST00000461326 MKNK2Q9HBH9 465 aa6.28□□□□□ -1.4
CLK1-206ENST00000461326 KRTAP9-7A8MTY7 169 aa6.27□□□□□ -1.41
CLK1-206ENST00000461326 GPR182O15218 404 aa6.27□□□□□ -1.41
CLK1-206ENST00000461326 IGHA2P01877 340 aa6.27□□□□□ -1.41
CLK1-206ENST00000461326 HNRNPUQ00839 825 aaKnown RBP eCLIP6.27□□□□□ -1.41
CLK1-206ENST00000461326 CDK5R2Q13319 367 aa6.27□□□□□ -1.41
CLK1-206ENST00000461326 AOC3Q16853 763 aa6.27□□□□□ -1.41
CLK1-206ENST00000461326 ZSWIM9Q86XI8 627 aa6.27□□□□□ -1.41
CLK1-206ENST00000461326 FLAD1Q8NFF5 587 aa6.27□□□□□ -1.41
CLK1-206ENST00000461326 FBF1Q8TES7 1133 aa6.27□□□□□ -1.41
CLK1-206ENST00000461326 PPP1R16BQ96T49 567 aa6.27□□□□□ -1.41
CLK1-206ENST00000461326 WDR18Q9BV38 432 aa6.27□□□□□ -1.41
CLK1-206ENST00000461326 LIN7BQ9HAP6 207 aa6.27□□□□□ -1.41
CLK1-206ENST00000461326 ZFYVE28Q9HCC9 887 aa6.27□□□□□ -1.41
CLK1-206ENST00000461326 TMEM265A0A087WTH1 108 aa6.26□□□□□ -1.41
CLK1-206ENST00000461326 UNCXA6NJT0 531 aa6.26□□□□□ -1.41
CLK1-206ENST00000461326 PRPF40AO75400 957 aaKnown RBP6.26□□□□□ -1.41
CLK1-206ENST00000461326 B3GALT4O96024 378 aa6.26□□□□□ -1.41
CLK1-206ENST00000461326 ZNF865P0CJ78 1059 aaPredicted RBP6.26□□□□□ -1.41
CLK1-206ENST00000461326 CD96P40200 585 aa6.26□□□□□ -1.41
CLK1-206ENST00000461326 KCNMB1Q16558 191 aa6.26□□□□□ -1.41
CLK1-206ENST00000461326 MLANAQ16655 118 aa6.26□□□□□ -1.41
CLK1-206ENST00000461326 ALG1LQ6GMV1 187 aa6.26□□□□□ -1.41
CLK1-206ENST00000461326 SLC23A3Q6PIS1 610 aa6.26□□□□□ -1.41
CLK1-206ENST00000461326 TRIM56Q9BRZ2 755 aaKnown RBP6.26□□□□□ -1.41
CLK1-206ENST00000461326 ATXN3LQ9H3M9 355 aa6.26□□□□□ -1.41
CLK1-206ENST00000461326 ECEL1O95672 775 aa6.25□□□□□ -1.41
CLK1-206ENST00000461326 CEACAM5P06731 702 aa6.25□□□□□ -1.41
CLK1-206ENST00000461326 GRIA4P48058 902 aa6.25□□□□□ -1.41
CLK1-206ENST00000461326 AP3B2Q13367 1082 aa6.25□□□□□ -1.41
CLK1-206ENST00000461326 LILRA6Q6PI73 481 aa6.25□□□□□ -1.41
CLK1-206ENST00000461326 DNAJC25Q9H1X3 360 aa6.25□□□□□ -1.41
CLK1-206ENST00000461326 PPP1R9AQ9ULJ8 1098 aa6.25□□□□□ -1.41
CLK1-206ENST00000461326 TMPRSS2O15393 492 aa6.24□□□□□ -1.41
CLK1-206ENST00000461326 TSPAN15O95858 294 aa6.24□□□□□ -1.41
CLK1-206ENST00000461326 POLR3DP05423 398 aaPredicted RBP6.24□□□□□ -1.41
CLK1-206ENST00000461326 LDHBP07195 334 aaKnown RBP6.24□□□□□ -1.41
CLK1-206ENST00000461326 MAPK8P45983 427 aa6.24□□□□□ -1.41
CLK1-206ENST00000461326 ENOX2Q16206 610 aaKnown RBP6.24□□□□□ -1.41
CLK1-206ENST00000461326 SPRED3Q2MJR0 410 aa6.24□□□□□ -1.41
CLK1-206ENST00000461326 FRMD6Q96NE9 622 aa6.24□□□□□ -1.41
CLK1-206ENST00000461326 TCF12Q99081 682 aa6.24□□□□□ -1.41
CLK1-206ENST00000461326 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.24□□□□□ -1.41
CLK1-206ENST00000461326 A0A1W2PP55 124 aa6.23□□□□□ -1.41
CLK1-206ENST00000461326 SLFN14P0C7P3 912 aa6.23□□□□□ -1.41
CLK1-206ENST00000461326 CFPP27918 469 aa6.23□□□□□ -1.41
CLK1-206ENST00000461326 LCE5AQ5TCM9 118 aa6.23□□□□□ -1.41
CLK1-206ENST00000461326 CILP2Q8IUL8 1156 aa6.23□□□□□ -1.41
CLK1-206ENST00000461326 SIAH1Q8IUQ4 282 aa6.23□□□□□ -1.41
CLK1-206ENST00000461326 LRRC56Q8IYG6 542 aaPredicted RBP6.23□□□□□ -1.41
CLK1-206ENST00000461326 SMYD4Q8IYR2 804 aaPredicted RBP6.23□□□□□ -1.41
CLK1-206ENST00000461326 CRIM1Q9NZV1 1036 aa6.23□□□□□ -1.41
CLK1-206ENST00000461326 KIAA1522Q9P206 1035 aaPredicted RBP6.23□□□□□ -1.41
CLK1-206ENST00000461326 NCANO14594 1321 aa6.23□□□□□ -1.41
CLK1-206ENST00000461326 PRRG2O14669 202 aa6.22□□□□□ -1.41
CLK1-206ENST00000461326 OXCT1P55809 520 aa6.22□□□□□ -1.41
CLK1-206ENST00000461326 XPCQ01831 940 aaPredicted RBP6.22□□□□□ -1.41
CLK1-206ENST00000461326 ID3Q02535 119 aa6.22□□□□□ -1.41
CLK1-206ENST00000461326 ANKLE2Q86XL3 938 aa6.22□□□□□ -1.41
CLK1-206ENST00000461326 GALNT12Q8IXK2 581 aa6.22□□□□□ -1.41
CLK1-206ENST00000461326 CSRNP1Q96S65 589 aa6.22□□□□□ -1.41
CLK1-206ENST00000461326 NIF3L1Q9GZT8 377 aa6.22□□□□□ -1.41
CLK1-206ENST00000461326 ZNF576Q9H609 170 aa6.22□□□□□ -1.41
CLK1-206ENST00000461326 MRS2Q9HD23 443 aa6.22□□□□□ -1.41
CLK1-206ENST00000461326 PNMA6FA0A0J9YX94 578 aa6.21□□□□□ -1.42
CLK1-206ENST00000461326 ZNF503-AS2A6NEH8 195 aa6.21□□□□□ -1.42
CLK1-206ENST00000461326 CPNE3O75131 537 aaKnown RBP6.21□□□□□ -1.42
CLK1-206ENST00000461326 TMC4Q7Z404 712 aa6.21□□□□□ -1.42
CLK1-206ENST00000461326 ASB11Q8WXH4 323 aa6.21□□□□□ -1.42
CLK1-206ENST00000461326 FANCD2OSQ96PS1 177 aa6.21□□□□□ -1.42
CLK1-206ENST00000461326 IGSF5Q9NSI5 407 aa6.21□□□□□ -1.42
CLK1-206ENST00000461326 SNX11Q9Y5W9 270 aa6.21□□□□□ -1.42
CLK1-206ENST00000461326 U3KQE9 123 aa6.21□□□□□ -1.42
CLK1-206ENST00000461326 B8ZZF3 427 aa6.2□□□□□ -1.42
CLK1-206ENST00000461326 RNGTTO60942 597 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms