RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 PRIM1P49642 420 aaKnown RBP10.02□□□□□ -0.81
BRCA1-205ENST00000461221 SLC12A2P55011 1212 aa10.02□□□□□ -0.81
BRCA1-205ENST00000461221 IRX5P78411 483 aaPredicted RBP10.02□□□□□ -0.81
BRCA1-205ENST00000461221 PDE4DQ08499 809 aa10.02□□□□□ -0.81
BRCA1-205ENST00000461221 KRT28Q7Z3Y7 464 aa10.02□□□□□ -0.81
BRCA1-205ENST00000461221 TTC6Q86TZ1 520 aa10.02□□□□□ -0.81
BRCA1-205ENST00000461221 RNF168Q8IYW5 571 aaPredicted RBP10.02□□□□□ -0.81
BRCA1-205ENST00000461221 CABS1Q96KC9 395 aa10.02□□□□□ -0.81
BRCA1-205ENST00000461221 TCEANC2Q96MN5 208 aa10.02□□□□□ -0.81
BRCA1-205ENST00000461221 TMOD4Q9NZQ9 345 aa10.02□□□□□ -0.81
BRCA1-205ENST00000461221 PPFIA1Q13136 1202 aa10.01□□□□□ -0.81
BRCA1-205ENST00000461221 SLC9C1Q4G0N8 1177 aa10.01□□□□□ -0.81
BRCA1-205ENST00000461221 ANKRD20A3Q5VUR7 823 aa10.01□□□□□ -0.81
BRCA1-205ENST00000461221 PROCA1Q8NCQ7 364 aaPredicted RBP10.01□□□□□ -0.81
BRCA1-205ENST00000461221 PDE1CQ14123 709 aaPredicted RBP10.01□□□□□ -0.81
BRCA1-205ENST00000461221 SBNO2Q9Y2G9 1366 aa10.01□□□□□ -0.81
BRCA1-205ENST00000461221 KRT3P12035 628 aa10.01□□□□□ -0.81
BRCA1-205ENST00000461221 APOBRQ0VD83 1088 aa10.01□□□□□ -0.81
BRCA1-205ENST00000461221 PHLDB3Q6NSJ2 640 aa10.01□□□□□ -0.81
BRCA1-205ENST00000461221 MRRFQ96E11 262 aaKnown RBP10.01□□□□□ -0.81
BRCA1-205ENST00000461221 ZRANB1Q9UGI0 708 aa10.01□□□□□ -0.81
BRCA1-205ENST00000461221 FAN1Q9Y2M0 1017 aa10.01□□□□□ -0.81
BRCA1-205ENST00000461221 GOLGA6BA6NDN3 693 aa10.01□□□□□ -0.81
BRCA1-205ENST00000461221 TROVE2P10155 538 aaKnown RBP eCLIP10.01□□□□□ -0.81
BRCA1-205ENST00000461221 KSR2Q6VAB6 950 aa10.01□□□□□ -0.81
BRCA1-205ENST00000461221 RUFY3Q7L099 469 aa10.01□□□□□ -0.81
BRCA1-205ENST00000461221 XAGE3Q8WTP9 111 aa10.01□□□□□ -0.81
BRCA1-205ENST00000461221 IQCDQ96DY2 449 aa10.01□□□□□ -0.81
BRCA1-205ENST00000461221 GBP5Q96PP8 586 aa10.01□□□□□ -0.81
BRCA1-205ENST00000461221 TSPYL2Q9H2G4 693 aaPredicted RBP10.01□□□□□ -0.81
BRCA1-205ENST00000461221 RNF40O75150 1001 aa10□□□□□ -0.81
BRCA1-205ENST00000461221 CREB3L3Q68CJ9 461 aa10□□□□□ -0.81
BRCA1-205ENST00000461221 LMBR1LQ6UX01 489 aa10□□□□□ -0.81
BRCA1-205ENST00000461221 VWA3AA6NCI4 1184 aa10□□□□□ -0.81
BRCA1-205ENST00000461221 CCDC169A6NNP5 214 aa10□□□□□ -0.81
BRCA1-205ENST00000461221 KIF11P52732 1056 aa10□□□□□ -0.81
BRCA1-205ENST00000461221 Q9H521 79 aa10□□□□□ -0.81
BRCA1-205ENST00000461221 CHPF2Q9P2E5 772 aa10□□□□□ -0.81
BRCA1-205ENST00000461221 NOC2LQ9Y3T9 749 aaKnown RBP10□□□□□ -0.81
BRCA1-205ENST00000461221 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10□□□□□ -0.81
BRCA1-205ENST00000461221 RALGAPBQ86X10 1494 aa10□□□□□ -0.81
BRCA1-205ENST00000461221 LDHBP07195 334 aaKnown RBP10□□□□□ -0.81
BRCA1-205ENST00000461221 HARSP12081 509 aaKnown RBP10□□□□□ -0.81
BRCA1-205ENST00000461221 ZC3H12CQ9C0D7 883 aaKnown RBP10□□□□□ -0.81
BRCA1-205ENST00000461221 RBSNQ9H1K0 784 aa10□□□□□ -0.81
BRCA1-205ENST00000461221 CTTNBP2NLQ9P2B4 639 aa10□□□□□ -0.81
BRCA1-205ENST00000461221 KRT15P19012 456 aa10□□□□□ -0.81
BRCA1-205ENST00000461221 AK2P54819 239 aa10□□□□□ -0.81
BRCA1-205ENST00000461221 RAB3GAP1Q15042 981 aa10□□□□□ -0.81
BRCA1-205ENST00000461221 KMT5BQ4FZB7 885 aa10□□□□□ -0.81
BRCA1-205ENST00000461221 MAGEB6Q8N7X4 407 aa10□□□□□ -0.81
BRCA1-205ENST00000461221 ANKFY1Q9P2R3 1169 aa10□□□□□ -0.81
BRCA1-205ENST00000461221 IQSEC3Q9UPP2 1182 aaPredicted RBP10□□□□□ -0.81
BRCA1-205ENST00000461221 SYNRGQ9UMZ2 1314 aa10□□□□□ -0.81
BRCA1-205ENST00000461221 FOXO3O43524 673 aa10□□□□□ -0.81
BRCA1-205ENST00000461221 IGHDP01880 384 aa10□□□□□ -0.81
BRCA1-205ENST00000461221 TMTC1Q8IUR5 882 aa10□□□□□ -0.81
BRCA1-205ENST00000461221 PLIN2Q99541 437 aa10□□□□□ -0.81
BRCA1-205ENST00000461221 NOD1Q9Y239 953 aa10□□□□□ -0.81
BRCA1-205ENST00000461221 AMOTL2Q9Y2J4 779 aa10□□□□□ -0.81
BRCA1-205ENST00000461221 NCOA1Q15788 1441 aa9.99□□□□□ -0.81
BRCA1-205ENST00000461221 U2AF2P26368 475 aaKnown RBP eCLIP9.99□□□□□ -0.811e-6■■■□□ 19.1
BRCA1-205ENST00000461221 YWHAEP62258 255 aaKnown RBP9.99□□□□□ -0.81
BRCA1-205ENST00000461221 GABPB1Q06547 395 aaPredicted RBP9.99□□□□□ -0.81
BRCA1-205ENST00000461221 LETM2Q2VYF4 491 aa9.99□□□□□ -0.81
BRCA1-205ENST00000461221 MUM1L1Q5H9M0 696 aa9.99□□□□□ -0.81
BRCA1-205ENST00000461221 DCUN1D2Q6PH85 259 aa9.99□□□□□ -0.81
BRCA1-205ENST00000461221 PNMA8AQ86V59 439 aaPredicted RBP9.99□□□□□ -0.81
BRCA1-205ENST00000461221 FCHSD1Q86WN1 690 aa9.99□□□□□ -0.81
BRCA1-205ENST00000461221 PPP4R1Q8TF05 950 aa9.99□□□□□ -0.81
BRCA1-205ENST00000461221 DACT3Q96B18 629 aaPredicted RBP9.99□□□□□ -0.81
BRCA1-205ENST00000461221 DDX21Q9NR30 783 aaKnown RBP eCLIP9.99□□□□□ -0.81
BRCA1-205ENST00000461221 IMPACTQ9P2X3 320 aa9.99□□□□□ -0.81
BRCA1-205ENST00000461221 WDR97A6NE52 1622 aa9.99□□□□□ -0.81
BRCA1-205ENST00000461221 ATP6V1AP38606 617 aa9.99□□□□□ -0.81
BRCA1-205ENST00000461221 WHAMMQ8TF30 809 aa9.99□□□□□ -0.81
BRCA1-205ENST00000461221 RAB17Q9H0T7 212 aa9.99□□□□□ -0.81
BRCA1-205ENST00000461221 NUCKS1Q9H1E3 243 aaKnown RBP9.99□□□□□ -0.81
BRCA1-205ENST00000461221 HELLSQ9NRZ9 838 aa9.99□□□□□ -0.81
BRCA1-205ENST00000461221 NIP7Q9Y221 180 aaKnown RBP eCLIP9.99□□□□□ -0.81
BRCA1-205ENST00000461221 DEXIO95424 95 aa9.99□□□□□ -0.81
BRCA1-205ENST00000461221 BCRP11274 1271 aa9.99□□□□□ -0.81
BRCA1-205ENST00000461221 SP4Q02446 784 aa9.99□□□□□ -0.81
BRCA1-205ENST00000461221 WHAMMP3Q1A5X7 153 aa9.99□□□□□ -0.81
BRCA1-205ENST00000461221 CFAP221Q4G0U5 840 aa9.99□□□□□ -0.81
BRCA1-205ENST00000461221 SKAP1Q86WV1 359 aa9.99□□□□□ -0.81
BRCA1-205ENST00000461221 JDP2Q8WYK2 163 aa9.99□□□□□ -0.81
BRCA1-205ENST00000461221 JARID2Q92833 1246 aaPredicted RBP9.99□□□□□ -0.81
BRCA1-205ENST00000461221 ARHGEF35A5YM69 484 aa9.99□□□□□ -0.81
BRCA1-205ENST00000461221 FLOT1O75955 427 aa9.99□□□□□ -0.81
BRCA1-205ENST00000461221 PAK1Q13153 545 aa9.99□□□□□ -0.81
BRCA1-205ENST00000461221 RPS6KA2Q15349 733 aa9.99□□□□□ -0.81
BRCA1-205ENST00000461221 DENND2CQ68D51 928 aa9.99□□□□□ -0.81
BRCA1-205ENST00000461221 C16orf71Q8IYS4 520 aaPredicted RBP9.99□□□□□ -0.81
BRCA1-205ENST00000461221 RILPQ96NA2 401 aa9.99□□□□□ -0.81
BRCA1-205ENST00000461221 MEIS3Q99687 375 aa9.99□□□□□ -0.81
BRCA1-205ENST00000461221 NACA2Q9H009 215 aa9.99□□□□□ -0.81
BRCA1-205ENST00000461221 ZNF174Q15697 407 aa9.98□□□□□ -0.81
BRCA1-205ENST00000461221 CASC4Q6P4E1 433 aa9.98□□□□□ -0.81
BRCA1-205ENST00000461221 MIER3Q7Z3K6 550 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms