RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 CNOT7Q9UIV1 285 aaKnown RBP17.33■□□□□ 0.36
COL5A3-202ENST00000461214 GPR75-ASB3A0A0A6YYF3 556 aa17.32■□□□□ 0.36
COL5A3-202ENST00000461214 BAG3O95817 575 aa17.32■□□□□ 0.36
COL5A3-202ENST00000461214 CHMLP26374 656 aa17.32■□□□□ 0.36
COL5A3-202ENST00000461214 ADGRA1Q86SQ6 560 aa17.32■□□□□ 0.36
COL5A3-202ENST00000461214 C2orf69Q8N8R5 385 aa17.32■□□□□ 0.36
COL5A3-202ENST00000461214 CCDC102AQ96A19 550 aa17.32■□□□□ 0.36
COL5A3-202ENST00000461214 GBA2Q9HCG7 927 aaPredicted RBP17.32■□□□□ 0.36
COL5A3-202ENST00000461214 MYOZ2Q9NPC6 264 aa17.32■□□□□ 0.36
COL5A3-202ENST00000461214 COL2A1P02458 1487 aaPredicted RBP17.31■□□□□ 0.36
COL5A3-202ENST00000461214 SPDYE2BA6NHP3 402 aa17.31■□□□□ 0.36
COL5A3-202ENST00000461214 SPDYE6P0CI01 402 aa17.31■□□□□ 0.36
COL5A3-202ENST00000461214 MFAP1P55081 439 aaKnown RBP17.31■□□□□ 0.36
COL5A3-202ENST00000461214 NMIQ13287 307 aaPredicted RBP17.31■□□□□ 0.36
COL5A3-202ENST00000461214 DLGAP5Q15398 846 aa17.31■□□□□ 0.36
COL5A3-202ENST00000461214 KIF4BQ2VIQ3 1234 aa17.31■□□□□ 0.36
COL5A3-202ENST00000461214 CFAP100Q494V2 611 aa17.31■□□□□ 0.36
COL5A3-202ENST00000461214 A0A0D9SFI3 127 aa17.3■□□□□ 0.36
COL5A3-202ENST00000461214 MAGEB6P1A0A0J9YX57 407 aa17.3■□□□□ 0.36
COL5A3-202ENST00000461214 BTDP43251 543 aa17.3■□□□□ 0.36
COL5A3-202ENST00000461214 PPP4CP60510 307 aa17.3■□□□□ 0.36
COL5A3-202ENST00000461214 KRT26Q7Z3Y9 468 aa17.3■□□□□ 0.36
COL5A3-202ENST00000461214 ZBED3Q96IU2 234 aaPredicted RBP17.3■□□□□ 0.36
COL5A3-202ENST00000461214 CSRNP1Q96S65 589 aa17.3■□□□□ 0.36
COL5A3-202ENST00000461214 RIOK1Q9BRS2 568 aaKnown RBP17.3■□□□□ 0.36
COL5A3-202ENST00000461214 PAPPA2Q9BXP8 1791 aa17.3■□□□□ 0.36
COL5A3-202ENST00000461214 RPAP1Q9BWH6 1393 aaPredicted RBP17.29■□□□□ 0.36
COL5A3-202ENST00000461214 CCDC171Q6TFL3 1326 aa17.29■□□□□ 0.36
COL5A3-202ENST00000461214 ADM5C9JUS6 153 aa17.29■□□□□ 0.36
COL5A3-202ENST00000461214 MYO1BO43795 1136 aa17.29■□□□□ 0.36
COL5A3-202ENST00000461214 EIF5BO60841 1220 aaKnown RBP17.29■□□□□ 0.36
COL5A3-202ENST00000461214 RBM5P52756 815 aaKnown RBP eCLIP17.29■□□□□ 0.36
COL5A3-202ENST00000461214 MCMDC2Q4G0Z9 681 aa17.29■□□□□ 0.36
COL5A3-202ENST00000461214 OSBP2Q969R2 916 aa17.29■□□□□ 0.36
COL5A3-202ENST00000461214 FAM227BQ96M60 508 aa17.29■□□□□ 0.36
COL5A3-202ENST00000461214 OTOFQ9HC10 1997 aa17.29■□□□□ 0.36
COL5A3-202ENST00000461214 GPAA1O43292 621 aa17.28■□□□□ 0.36
COL5A3-202ENST00000461214 MBD4O95243 580 aa17.28■□□□□ 0.36
COL5A3-202ENST00000461214 CHGBP05060 677 aa17.28■□□□□ 0.36
COL5A3-202ENST00000461214 GNAT2P19087 354 aa17.28■□□□□ 0.36
COL5A3-202ENST00000461214 APOBEC3HQ6NTF7 200 aaKnown RBP17.28■□□□□ 0.36
COL5A3-202ENST00000461214 CWC27Q6UX04 472 aaKnown RBP17.28■□□□□ 0.36
COL5A3-202ENST00000461214 SAMD7Q7Z3H4 446 aa17.28■□□□□ 0.36
COL5A3-202ENST00000461214 PUS7LQ9H0K6 701 aaKnown RBP17.28■□□□□ 0.36
COL5A3-202ENST00000461214 AATFQ9NY61 560 aaKnown RBP eCLIP17.28■□□□□ 0.36
COL5A3-202ENST00000461214 TMOD2Q9NZR1 351 aa17.28■□□□□ 0.36
COL5A3-202ENST00000461214 PITPNM2Q9BZ72 1349 aa17.27■□□□□ 0.36
COL5A3-202ENST00000461214 M0R2C6 588 aa17.27■□□□□ 0.36
COL5A3-202ENST00000461214 WNT10BO00744 389 aa17.27■□□□□ 0.36
COL5A3-202ENST00000461214 SGSM2O43147 1006 aa17.27■□□□□ 0.36
COL5A3-202ENST00000461214 SLC10A3P09131 477 aa17.27■□□□□ 0.36
COL5A3-202ENST00000461214 TBC1D10BQ4KMP7 808 aaPredicted RBP17.27■□□□□ 0.36
COL5A3-202ENST00000461214 RBM26Q5T8P6 1007 aaKnown RBP17.27■□□□□ 0.36
COL5A3-202ENST00000461214 MIGA1Q8NAN2 632 aa17.27■□□□□ 0.36
COL5A3-202ENST00000461214 ESYT1Q9BSJ8 1104 aa17.27■□□□□ 0.36
COL5A3-202ENST00000461214 CRNKL1Q9BZJ0 848 aaKnown RBP17.27■□□□□ 0.36
COL5A3-202ENST00000461214 DOCK1Q14185 1865 aa17.27■□□□□ 0.35
COL5A3-202ENST00000461214 ZMYM6O95789 1325 aa17.26■□□□□ 0.35
COL5A3-202ENST00000461214 RHBDL3P58872 404 aa17.26■□□□□ 0.35
COL5A3-202ENST00000461214 SPDYE2Q495Y8 402 aa17.26■□□□□ 0.35
COL5A3-202ENST00000461214 SLFNL1Q499Z3 407 aa17.26■□□□□ 0.35
COL5A3-202ENST00000461214 FKBP1CQ5VVH2 108 aa17.26■□□□□ 0.35
COL5A3-202ENST00000461214 LCORLQ8N3X6 602 aa17.26■□□□□ 0.35
COL5A3-202ENST00000461214 PRMT6Q96LA8 375 aaPredicted RBP17.26■□□□□ 0.35
COL5A3-202ENST00000461214 NPM3O75607 178 aaKnown RBP17.25■□□□□ 0.35
COL5A3-202ENST00000461214 TBC1D8O95759 1140 aa17.25■□□□□ 0.35
COL5A3-202ENST00000461214 EGFRP00533 1210 aa17.25■□□□□ 0.35
COL5A3-202ENST00000461214 PKN2Q16513 984 aaKnown RBP17.25■□□□□ 0.35
COL5A3-202ENST00000461214 CDC42EP5Q6NZY7 148 aa17.25■□□□□ 0.35
COL5A3-202ENST00000461214 DCPSQ96C86 337 aaKnown RBP17.25■□□□□ 0.35
COL5A3-202ENST00000461214 STRBPQ96SI9 672 aaKnown RBP17.25■□□□□ 0.35
COL5A3-202ENST00000461214 SEC62Q99442 399 aaKnown RBP17.25■□□□□ 0.35
COL5A3-202ENST00000461214 GREB1LQ9C091 1923 aaPredicted RBP17.25■□□□□ 0.35
COL5A3-202ENST00000461214 DYNLL1P63167 89 aaKnown RBP17.24■□□□□ 0.35
COL5A3-202ENST00000461214 TNFAIP1Q13829 316 aa17.24■□□□□ 0.35
COL5A3-202ENST00000461214 ZNF589Q86UQ0 364 aaPredicted RBP17.24■□□□□ 0.35
COL5A3-202ENST00000461214 APOBEC3FQ8IUX4 373 aaKnown RBP17.24■□□□□ 0.35
COL5A3-202ENST00000461214 TEX11Q8IYF3 940 aa17.24■□□□□ 0.35
COL5A3-202ENST00000461214 SH3RF3Q8TEJ3 882 aaPredicted RBP17.24■□□□□ 0.35
COL5A3-202ENST00000461214 ZNF296Q8WUU4 475 aaPredicted RBP17.24■□□□□ 0.35
COL5A3-202ENST00000461214 IDI2Q9BXS1 227 aa17.24■□□□□ 0.35
COL5A3-202ENST00000461214 ARMT1Q9H993 441 aa17.24■□□□□ 0.35
COL5A3-202ENST00000461214 PCDHAC2Q9Y5I4 1007 aa17.24■□□□□ 0.35
COL5A3-202ENST00000461214 EPB41L2O43491 1005 aaKnown RBP17.23■□□□□ 0.35
COL5A3-202ENST00000461214 WDHD1O75717 1129 aaPredicted RBP17.23■□□□□ 0.35
COL5A3-202ENST00000461214 REC8O95072 547 aa17.23■□□□□ 0.35
COL5A3-202ENST00000461214 NBPF9Q3BBW0 867 aa17.23■□□□□ 0.35
COL5A3-202ENST00000461214 C8orf34Q49A92 452 aa17.23■□□□□ 0.35
COL5A3-202ENST00000461214 GIMAP6Q6P9H5 292 aa17.23■□□□□ 0.35
COL5A3-202ENST00000461214 DDRGK1Q96HY6 314 aa17.23■□□□□ 0.35
COL5A3-202ENST00000461214 DSCC1Q9BVC3 393 aa17.23■□□□□ 0.35
COL5A3-202ENST00000461214 IL25Q9H293 177 aa17.23■□□□□ 0.35
COL5A3-202ENST00000461214 TDRD3Q9H7E2 651 aaKnown RBP17.23■□□□□ 0.35
COL5A3-202ENST00000461214 ATP8A2Q9NTI2 1148 aa17.23■□□□□ 0.35
COL5A3-202ENST00000461214 USP40Q9NVE5 1235 aa17.23■□□□□ 0.35
COL5A3-202ENST00000461214 ZNF70Q9UC06 446 aaPredicted RBP17.23■□□□□ 0.35
COL5A3-202ENST00000461214 ATRNL1Q5VV63 1379 aa17.23■□□□□ 0.35
COL5A3-202ENST00000461214 FLT1P17948 1338 aa17.22■□□□□ 0.35
COL5A3-202ENST00000461214 CCDC129Q6ZRS4 1044 aa17.22■□□□□ 0.35
COL5A3-202ENST00000461214 FAM83AQ86UY5 434 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms