RNA–Protein interactions for RNA: ENST00000461159.6

HDAC9-219, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-219ENST00000461159 MUM1L1Q5H9M0 696 aa9.83□□□□□ -0.84
HDAC9-219ENST00000461159 ZNF589Q86UQ0 364 aaPredicted RBP9.83□□□□□ -0.84
HDAC9-219ENST00000461159 TXNRD3Q86VQ6 643 aa9.83□□□□□ -0.84
HDAC9-219ENST00000461159 RPGRQ92834 1020 aaKnown RBP9.83□□□□□ -0.84
HDAC9-219ENST00000461159 GPR108Q9NPR9 543 aa9.83□□□□□ -0.84
HDAC9-219ENST00000461159 CNPY2Q9Y2B0 182 aa9.83□□□□□ -0.84
HDAC9-219ENST00000461159 TNRC6CQ9HCJ0 1690 aaKnown RBP9.83□□□□□ -0.84
HDAC9-219ENST00000461159 STX6O43752 255 aa9.82□□□□□ -0.84
HDAC9-219ENST00000461159 ZSCAN26Q16670 478 aa9.82□□□□□ -0.84
HDAC9-219ENST00000461159 HAUS7Q99871 368 aa9.82□□□□□ -0.84
HDAC9-219ENST00000461159 TOMM22Q9NS69 142 aa9.82□□□□□ -0.84
HDAC9-219ENST00000461159 PAG1Q9NWQ8 432 aa9.82□□□□□ -0.84
HDAC9-219ENST00000461159 ANKIB1Q9P2G1 1089 aa9.82□□□□□ -0.84
HDAC9-219ENST00000461159 LAMB2P55268 1798 aa9.82□□□□□ -0.84
HDAC9-219ENST00000461159 MROH5Q6ZUA9 1318 aa9.82□□□□□ -0.84
HDAC9-219ENST00000461159 RAD21O60216 631 aa9.82□□□□□ -0.84
HDAC9-219ENST00000461159 ZBTB7AO95365 584 aa9.82□□□□□ -0.84
HDAC9-219ENST00000461159 HNRNPH2P55795 449 aaKnown RBP9.82□□□□□ -0.84
HDAC9-219ENST00000461159 NME8Q8N427 588 aa9.82□□□□□ -0.84
HDAC9-219ENST00000461159 KLHL23Q8NBE8 558 aa9.82□□□□□ -0.84
HDAC9-219ENST00000461159 LPIN2Q92539 896 aa9.82□□□□□ -0.84
HDAC9-219ENST00000461159 LSG1Q9H089 658 aaKnown RBP9.82□□□□□ -0.84
HDAC9-219ENST00000461159 PARP3Q9Y6F1 533 aa9.82□□□□□ -0.84
HDAC9-219ENST00000461159 F13A1P00488 732 aa9.81□□□□□ -0.84
HDAC9-219ENST00000461159 FGFR2P21802 821 aa9.81□□□□□ -0.84
HDAC9-219ENST00000461159 JAKMIP3Q5VZ66 844 aa9.81□□□□□ -0.84
HDAC9-219ENST00000461159 RASEFQ8IZ41 740 aa9.81□□□□□ -0.84
HDAC9-219ENST00000461159 TMX1Q9H3N1 280 aa9.81□□□□□ -0.84
HDAC9-219ENST00000461159 DDX41Q9UJV9 622 aaKnown RBP9.81□□□□□ -0.84
HDAC9-219ENST00000461159 LIMCH1Q9UPQ0 1083 aa9.81□□□□□ -0.84
HDAC9-219ENST00000461159 TAF6LQ9Y6J9 622 aa9.81□□□□□ -0.84
HDAC9-219ENST00000461159 MYO5AQ9Y4I1 1855 aaKnown RBP9.81□□□□□ -0.84
HDAC9-219ENST00000461159 CHRNA5P30532 468 aa9.81□□□□□ -0.84
HDAC9-219ENST00000461159 SF3A1Q15459 793 aaKnown RBP9.81□□□□□ -0.84
HDAC9-219ENST00000461159 PROCA1Q8NCQ7 364 aaPredicted RBP9.81□□□□□ -0.84
HDAC9-219ENST00000461159 FIBPO43427 364 aa9.8□□□□□ -0.84
HDAC9-219ENST00000461159 IDH1O75874 414 aaKnown RBP9.8□□□□□ -0.84
HDAC9-219ENST00000461159 SLC5A1P13866 664 aa9.8□□□□□ -0.84
HDAC9-219ENST00000461159 SYT1P21579 422 aa9.8□□□□□ -0.84
HDAC9-219ENST00000461159 RBM5P52756 815 aaKnown RBP eCLIP9.8□□□□□ -0.84
HDAC9-219ENST00000461159 RASGRF1Q13972 1273 aa9.8□□□□□ -0.84
HDAC9-219ENST00000461159 ATF5Q9Y2D1 282 aaPredicted RBP9.8□□□□□ -0.84
HDAC9-219ENST00000461159 COL24A1Q17RW2 1714 aa9.8□□□□□ -0.84
HDAC9-219ENST00000461159 AKAP11Q9UKA4 1901 aa9.8□□□□□ -0.84
HDAC9-219ENST00000461159 PSDA5PKW4 1024 aaPredicted RBP9.8□□□□□ -0.84
HDAC9-219ENST00000461159 CYP2C19P33261 490 aa9.8□□□□□ -0.84
HDAC9-219ENST00000461159 VPS37DQ86XT2 251 aa9.8□□□□□ -0.84
HDAC9-219ENST00000461159 SUGP1Q8IWZ8 645 aaKnown RBP9.8□□□□□ -0.84
HDAC9-219ENST00000461159 C17orf53Q8N3J3 647 aaPredicted RBP9.8□□□□□ -0.84
HDAC9-219ENST00000461159 KIAA1524Q8TCG1 905 aa9.8□□□□□ -0.84
HDAC9-219ENST00000461159 LRP5O75197 1615 aa9.8□□□□□ -0.84
HDAC9-219ENST00000461159 CCDC192P0DO97 292 aa9.79□□□□□ -0.84
HDAC9-219ENST00000461159 CPA1P15085 419 aa9.79□□□□□ -0.84
HDAC9-219ENST00000461159 ABCD1P33897 745 aa9.79□□□□□ -0.84
HDAC9-219ENST00000461159 INHBEP58166 350 aa9.79□□□□□ -0.84
HDAC9-219ENST00000461159 IRX1P78414 480 aaPredicted RBP9.79□□□□□ -0.84
HDAC9-219ENST00000461159 GRAPQ13588 217 aa9.79□□□□□ -0.84
HDAC9-219ENST00000461159 SYCP1Q15431 976 aa9.79□□□□□ -0.84
HDAC9-219ENST00000461159 KBTBD3Q8NAB2 608 aa9.79□□□□□ -0.84
HDAC9-219ENST00000461159 FLAD1Q8NFF5 587 aa9.79□□□□□ -0.84
HDAC9-219ENST00000461159 GRAPLQ8TC17 118 aaPredicted RBP9.79□□□□□ -0.84
HDAC9-219ENST00000461159 TSC1Q92574 1164 aa9.79□□□□□ -0.84
HDAC9-219ENST00000461159 FAM212AQ96EL1 285 aa9.79□□□□□ -0.84
HDAC9-219ENST00000461159 FUCA2Q9BTY2 467 aa9.79□□□□□ -0.84
HDAC9-219ENST00000461159 HMG20BQ9P0W2 317 aa9.79□□□□□ -0.84
HDAC9-219ENST00000461159 PPP1R1BQ9UD71 204 aaPredicted RBP9.79□□□□□ -0.84
HDAC9-219ENST00000461159 SNX14Q9Y5W7 946 aa9.79□□□□□ -0.84
HDAC9-219ENST00000461159 TCHHQ07283 1943 aa9.79□□□□□ -0.84
HDAC9-219ENST00000461159 RGL2O15211 777 aa9.79□□□□□ -0.84
HDAC9-219ENST00000461159 AK2P54819 239 aa9.79□□□□□ -0.84
HDAC9-219ENST00000461159 R3HDM1Q15032 1099 aaKnown RBP9.79□□□□□ -0.84
HDAC9-219ENST00000461159 VPS53Q5VIR6 699 aa9.79□□□□□ -0.84
HDAC9-219ENST00000461159 GIMAP6Q6P9H5 292 aa9.79□□□□□ -0.84
HDAC9-219ENST00000461159 ATL2Q8NHH9 583 aa9.79□□□□□ -0.84
HDAC9-219ENST00000461159 DRC1Q96MC2 740 aa9.79□□□□□ -0.84
HDAC9-219ENST00000461159 TTC14Q96N46 770 aa9.79□□□□□ -0.84
HDAC9-219ENST00000461159 PIH1D3Q9NQM4 214 aaKnown RBP9.79□□□□□ -0.84
HDAC9-219ENST00000461159 ABCF2Q9UG63 623 aa9.79□□□□□ -0.84
HDAC9-219ENST00000461159 RTL9Q8NET4 1388 aa9.79□□□□□ -0.84
HDAC9-219ENST00000461159 A0A0G2JLW4 131 aa9.78□□□□□ -0.84
HDAC9-219ENST00000461159 WASHC4Q2M389 1173 aa9.78□□□□□ -0.84
HDAC9-219ENST00000461159 TSGA10IPQ3SY00 556 aa9.78□□□□□ -0.84
HDAC9-219ENST00000461159 CRY2Q49AN0 593 aa9.78□□□□□ -0.84
HDAC9-219ENST00000461159 FAM84BQ96KN1 310 aaPredicted RBP9.78□□□□□ -0.84
HDAC9-219ENST00000461159 TRERF1Q96PN7 1200 aa9.78□□□□□ -0.84
HDAC9-219ENST00000461159 MAP2K2P36507 400 aa9.78□□□□□ -0.84
HDAC9-219ENST00000461159 KRT222Q8N1A0 295 aa9.78□□□□□ -0.84
HDAC9-219ENST00000461159 ZSCAN31Q96LW9 406 aaPredicted RBP9.78□□□□□ -0.84
HDAC9-219ENST00000461159 LARP6Q9BRS8 491 aaKnown RBP9.78□□□□□ -0.84
HDAC9-219ENST00000461159 TACO1Q9BSH4 297 aaKnown RBP9.78□□□□□ -0.84
HDAC9-219ENST00000461159 RANBP17Q9H2T7 1088 aaKnown RBP9.78□□□□□ -0.84
HDAC9-219ENST00000461159 CTNNA3Q9UI47 895 aa9.78□□□□□ -0.84
HDAC9-219ENST00000461159 ERICH4A6NGS2 130 aa9.77□□□□□ -0.84
HDAC9-219ENST00000461159 DTNBO60941 627 aa9.77□□□□□ -0.84
HDAC9-219ENST00000461159 SRGNP10124 158 aa9.77□□□□□ -0.84
HDAC9-219ENST00000461159 GPSM2P81274 684 aa9.77□□□□□ -0.84
HDAC9-219ENST00000461159 ADCK5Q3MIX3 580 aa9.77□□□□□ -0.84
HDAC9-219ENST00000461159 SLC9C2Q5TAH2 1124 aa9.77□□□□□ -0.84
HDAC9-219ENST00000461159 RUFY3Q7L099 469 aa9.77□□□□□ -0.84
HDAC9-219ENST00000461159 SPATA5Q8NB90 893 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms