RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 CBX8Q9HC52 389 aa6.46□□□□□ -1.38
SPTLC1-203ENST00000461132 BIN2Q9UBW5 565 aaPredicted RBP6.46□□□□□ -1.38
SPTLC1-203ENST00000461132 TMEM265A0A087WTH1 108 aa6.45□□□□□ -1.38
SPTLC1-203ENST00000461132 COL19A1Q14993 1142 aa6.45□□□□□ -1.38
SPTLC1-203ENST00000461132 ECM1Q16610 540 aa6.45□□□□□ -1.38
SPTLC1-203ENST00000461132 AOC3Q16853 763 aa6.45□□□□□ -1.38
SPTLC1-203ENST00000461132 MAP1SQ66K74 1059 aaPredicted RBP6.45□□□□□ -1.38
SPTLC1-203ENST00000461132 SPRED2Q7Z698 418 aa6.45□□□□□ -1.38
SPTLC1-203ENST00000461132 ATG4DQ86TL0 474 aaPredicted RBP6.45□□□□□ -1.38
SPTLC1-203ENST00000461132 SULF2Q8IWU5 870 aa6.45□□□□□ -1.38
SPTLC1-203ENST00000461132 ALKBH8Q96BT7 664 aaKnown RBP6.45□□□□□ -1.38
SPTLC1-203ENST00000461132 RBCK1Q9BYM8 510 aa6.45□□□□□ -1.38
SPTLC1-203ENST00000461132 MKNK2Q9HBH9 465 aa6.45□□□□□ -1.38
SPTLC1-203ENST00000461132 DISC1Q9NRI5 854 aa6.45□□□□□ -1.38
SPTLC1-203ENST00000461132 SAMM50Q9Y512 469 aa6.45□□□□□ -1.38
SPTLC1-203ENST00000461132 PAPLNO95428 1278 aa6.44□□□□□ -1.38
SPTLC1-203ENST00000461132 CEACAM5P06731 702 aa6.44□□□□□ -1.38
SPTLC1-203ENST00000461132 CD8BP10966 210 aa6.44□□□□□ -1.38
SPTLC1-203ENST00000461132 ITIH2P19823 946 aa6.44□□□□□ -1.38
SPTLC1-203ENST00000461132 FUT4P22083 530 aa6.44□□□□□ -1.38
SPTLC1-203ENST00000461132 ANGEL2Q5VTE6 544 aaKnown RBP6.44□□□□□ -1.38
SPTLC1-203ENST00000461132 TOP6BLQ8N6T0 577 aa6.44□□□□□ -1.38
SPTLC1-203ENST00000461132 BCO2Q9BYV7 579 aa6.44□□□□□ -1.38
SPTLC1-203ENST00000461132 GTF2IRD1Q9UHL9 959 aa6.44□□□□□ -1.38
SPTLC1-203ENST00000461132 KRTAP4-8A0A0G2JLE6 195 aa6.43□□□□□ -1.38
SPTLC1-203ENST00000461132 FARP2O94887 1054 aaPredicted RBP6.43□□□□□ -1.38
SPTLC1-203ENST00000461132 ARNTP27540 789 aa6.43□□□□□ -1.38
SPTLC1-203ENST00000461132 TXNDC2Q86VQ3 553 aa6.43□□□□□ -1.38
SPTLC1-203ENST00000461132 KSR1Q8IVT5 923 aa6.43□□□□□ -1.38
SPTLC1-203ENST00000461132 GLIS3Q8NEA6 775 aa6.43□□□□□ -1.38
SPTLC1-203ENST00000461132 FAM168AQ92567 244 aa6.43□□□□□ -1.38
SPTLC1-203ENST00000461132 SLC38A3Q99624 504 aa6.43□□□□□ -1.38
SPTLC1-203ENST00000461132 DUSP23Q9BVJ7 150 aa6.43□□□□□ -1.38
SPTLC1-203ENST00000461132 NME2P22392 152 aa6.42□□□□□ -1.38
SPTLC1-203ENST00000461132 RANGAP1P46060 587 aaPredicted RBP6.42□□□□□ -1.38
SPTLC1-203ENST00000461132 JAG1P78504 1218 aa6.42□□□□□ -1.38
SPTLC1-203ENST00000461132 RNF214Q8ND24 703 aa6.42□□□□□ -1.38
SPTLC1-203ENST00000461132 ISL2Q96A47 359 aa6.42□□□□□ -1.38
SPTLC1-203ENST00000461132 LEFTY1O75610 366 aa6.41□□□□□ -1.38
SPTLC1-203ENST00000461132 RNASE1P07998 156 aaKnown RBP6.41□□□□□ -1.38
SPTLC1-203ENST00000461132 ERVK-24P63145 666 aa6.41□□□□□ -1.38
SPTLC1-203ENST00000461132 ZNF648Q5T619 568 aaPredicted RBP6.41□□□□□ -1.38
SPTLC1-203ENST00000461132 CDC37L1Q7L3B6 337 aa6.41□□□□□ -1.38
SPTLC1-203ENST00000461132 ASB11Q8WXH4 323 aa6.41□□□□□ -1.38
SPTLC1-203ENST00000461132 DCTN4Q9UJW0 460 aa6.41□□□□□ -1.38
SPTLC1-203ENST00000461132 PCDHGC5Q9Y5F6 944 aa6.41□□□□□ -1.38
SPTLC1-203ENST00000461132 PNMA6FA0A0J9YX94 578 aa6.4□□□□□ -1.38
SPTLC1-203ENST00000461132 GNAT3A8MTJ3 354 aa6.4□□□□□ -1.38
SPTLC1-203ENST00000461132 OXCT1P55809 520 aa6.4□□□□□ -1.38
SPTLC1-203ENST00000461132 PLCB3Q01970 1234 aa6.4□□□□□ -1.38
SPTLC1-203ENST00000461132 IKZF1Q13422 519 aa6.4□□□□□ -1.38
SPTLC1-203ENST00000461132 PI16Q6UXB8 463 aa6.4□□□□□ -1.38
SPTLC1-203ENST00000461132 TMC7Q7Z402 723 aa6.4□□□□□ -1.38
SPTLC1-203ENST00000461132 PDZD3Q86UT5 571 aa6.4□□□□□ -1.38
SPTLC1-203ENST00000461132 TMEM40Q8WWA1 233 aa6.4□□□□□ -1.38
SPTLC1-203ENST00000461132 CEP44Q9C0F1 390 aa6.4□□□□□ -1.38
SPTLC1-203ENST00000461132 SNX11Q9Y5W9 270 aa6.4□□□□□ -1.38
SPTLC1-203ENST00000461132 BRD1O95696 1058 aa6.39□□□□□ -1.39
SPTLC1-203ENST00000461132 MAPK1P28482 360 aa6.39□□□□□ -1.39
SPTLC1-203ENST00000461132 GSTT1P30711 240 aa6.39□□□□□ -1.39
SPTLC1-203ENST00000461132 CD96P40200 585 aa6.39□□□□□ -1.39
SPTLC1-203ENST00000461132 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.39□□□□□ -1.39
SPTLC1-203ENST00000461132 ZC3H12AQ5D1E8 599 aaKnown RBP6.39□□□□□ -1.39
SPTLC1-203ENST00000461132 SLC23A3Q6PIS1 610 aa6.39□□□□□ -1.39
SPTLC1-203ENST00000461132 NXPE4Q6UWF7 544 aa6.39□□□□□ -1.39
SPTLC1-203ENST00000461132 LRRN4CLQ8ND94 238 aa6.39□□□□□ -1.39
SPTLC1-203ENST00000461132 GPBAR1Q8TDU6 330 aa6.39□□□□□ -1.39
SPTLC1-203ENST00000461132 MBNL3Q9NUK0 354 aaKnown RBP6.39□□□□□ -1.39
SPTLC1-203ENST00000461132 SOWAHDA6NJG2 315 aa6.38□□□□□ -1.39
SPTLC1-203ENST00000461132 IGHA2P01877 340 aa6.38□□□□□ -1.39
SPTLC1-203ENST00000461132 NEFMP07197 916 aa6.38□□□□□ -1.39
SPTLC1-203ENST00000461132 PDIA4P13667 645 aaKnown RBP6.38□□□□□ -1.39
SPTLC1-203ENST00000461132 LRRC14Q15048 493 aa6.38□□□□□ -1.39
SPTLC1-203ENST00000461132 TPTE2Q6XPS3 522 aa6.38□□□□□ -1.39
SPTLC1-203ENST00000461132 KCT2Q8NC54 265 aa6.38□□□□□ -1.39
SPTLC1-203ENST00000461132 ELMO3Q96BJ8 720 aa6.38□□□□□ -1.39
SPTLC1-203ENST00000461132 CSADQ9Y600 493 aa6.38□□□□□ -1.39
SPTLC1-203ENST00000461132 ZNF124Q15973 351 aa6.37□□□□□ -1.39
SPTLC1-203ENST00000461132 PPM1JQ5JR12 505 aa6.37□□□□□ -1.39
SPTLC1-203ENST00000461132 WFDC3Q8IUB2 231 aa6.37□□□□□ -1.39
SPTLC1-203ENST00000461132 SRCIN1Q9C0H9 1055 aa6.37□□□□□ -1.39
SPTLC1-203ENST00000461132 PRDM10Q9NQV6 1147 aa6.37□□□□□ -1.39
SPTLC1-203ENST00000461132 DBX1A6NMT0 343 aa6.36□□□□□ -1.39
SPTLC1-203ENST00000461132 DCDC2CA8MYV0 355 aa6.36□□□□□ -1.39
SPTLC1-203ENST00000461132 ZP2Q05996 745 aa6.36□□□□□ -1.39
SPTLC1-203ENST00000461132 KCNMB1Q16558 191 aa6.36□□□□□ -1.39
SPTLC1-203ENST00000461132 LLGL2Q6P1M3 1020 aa6.36□□□□□ -1.39
SPTLC1-203ENST00000461132 STK35Q8TDR2 534 aa6.36□□□□□ -1.39
SPTLC1-203ENST00000461132 NECAB3Q96P71 396 aaPredicted RBP6.36□□□□□ -1.39
SPTLC1-203ENST00000461132 PRDM5Q9NQX1 630 aaPredicted RBP6.36□□□□□ -1.39
SPTLC1-203ENST00000461132 FAM53CQ9NYF3 392 aa6.36□□□□□ -1.39
SPTLC1-203ENST00000461132 ADAMTS6Q9UKP5 1117 aa6.36□□□□□ -1.39
SPTLC1-203ENST00000461132 PCDHA4Q9UN74 947 aa6.36□□□□□ -1.39
SPTLC1-203ENST00000461132 PLAGL2Q9UPG8 496 aa6.36□□□□□ -1.39
SPTLC1-203ENST00000461132 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.36□□□□□ -1.39
SPTLC1-203ENST00000461132 CARMIL2Q6F5E8 1435 aa6.35□□□□□ -1.39
SPTLC1-203ENST00000461132 LRRC10BA6NIK2 292 aa6.35□□□□□ -1.39
SPTLC1-203ENST00000461132 IGF2BP3O00425 579 aaKnown RBP eCLIP6.35□□□□□ -1.39
SPTLC1-203ENST00000461132 FANCGO15287 622 aa6.35□□□□□ -1.39
SPTLC1-203ENST00000461132 TRIM37O94972 964 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms