RNA–Protein interactions for RNA: ENST00000460801.5

PTPRN-210, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 2

Gene PTPRN, Length 2,239 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-210ENST00000460801 TMTC2Q8N394 836 aa16.22■□□□□ 0.19
PTPRN-210ENST00000460801 AIFM3Q96NN9 605 aa16.22■□□□□ 0.19
PTPRN-210ENST00000460801 MYL10Q9BUA6 226 aa16.22■□□□□ 0.19
PTPRN-210ENST00000460801 TOMM22Q9NS69 142 aa16.22■□□□□ 0.19
PTPRN-210ENST00000460801 MINDY4BA8MYZ0 360 aa16.22■□□□□ 0.19
PTPRN-210ENST00000460801 IARSP41252 1262 aaKnown RBP16.22■□□□□ 0.19
PTPRN-210ENST00000460801 WTAPQ15007 396 aa16.22■□□□□ 0.19
PTPRN-210ENST00000460801 MYSM1Q5VVJ2 828 aa16.22■□□□□ 0.19
PTPRN-210ENST00000460801 PRR5LQ6MZQ0 368 aa16.22■□□□□ 0.19
PTPRN-210ENST00000460801 SYNE3Q6ZMZ3 975 aa16.22■□□□□ 0.19
PTPRN-210ENST00000460801 CCAR1Q8IX12 1150 aaKnown RBP16.22■□□□□ 0.19
PTPRN-210ENST00000460801 CCDC144CPQ8IYA2 1237 aa16.22■□□□□ 0.19
PTPRN-210ENST00000460801 PHKBQ93100 1093 aa16.22■□□□□ 0.19
PTPRN-210ENST00000460801 POLR3EQ9NVU0 708 aa16.22■□□□□ 0.19
PTPRN-210ENST00000460801 BAZ2AQ9UIF9 1905 aaKnown RBP16.21■□□□□ 0.19
PTPRN-210ENST00000460801 STK36Q9NRP7 1315 aa16.21■□□□□ 0.19
PTPRN-210ENST00000460801 KIF28PB7ZC32 967 aa16.21■□□□□ 0.19
PTPRN-210ENST00000460801 POLR3DP05423 398 aaPredicted RBP16.21■□□□□ 0.19
PTPRN-210ENST00000460801 RCAN1P53805 252 aa16.21■□□□□ 0.19
PTPRN-210ENST00000460801 TYRO3Q06418 890 aa16.21■□□□□ 0.19
PTPRN-210ENST00000460801 SLC27A3Q5K4L6 730 aa16.21■□□□□ 0.19
PTPRN-210ENST00000460801 LINC00301Q8NCQ3 95 aa16.21■□□□□ 0.19
PTPRN-210ENST00000460801 ZKSCAN3Q9BRR0 538 aa16.21■□□□□ 0.19
PTPRN-210ENST00000460801 LEMD3Q9Y2U8 911 aa16.21■□□□□ 0.19
PTPRN-210ENST00000460801 ECM29Q5VYK3 1845 aa16.21■□□□□ 0.18
PTPRN-210ENST00000460801 ERICH2A1L162 156 aa16.21■□□□□ 0.18
PTPRN-210ENST00000460801 YEATS4O95619 227 aa16.21■□□□□ 0.18
PTPRN-210ENST00000460801 FGRP09769 529 aa16.21■□□□□ 0.18
PTPRN-210ENST00000460801 GYS1P13807 737 aa16.21■□□□□ 0.18
PTPRN-210ENST00000460801 IFNAR1P17181 557 aa16.21■□□□□ 0.18
PTPRN-210ENST00000460801 KRT40Q6A162 431 aa16.21■□□□□ 0.18
PTPRN-210ENST00000460801 CKAP2LQ8IYA6 745 aa16.21■□□□□ 0.18
PTPRN-210ENST00000460801 ENGASEQ8NFI3 743 aa16.21■□□□□ 0.18
PTPRN-210ENST00000460801 ESR2Q92731 530 aa16.21■□□□□ 0.18
PTPRN-210ENST00000460801 GOLPH3LQ9H4A5 285 aa16.21■□□□□ 0.18
PTPRN-210ENST00000460801 MRVI1Q9Y6F6 885 aa16.21■□□□□ 0.18
PTPRN-210ENST00000460801 PRDX5P30044 214 aa16.2■□□□□ 0.18
PTPRN-210ENST00000460801 ME1P48163 572 aa16.2■□□□□ 0.18
PTPRN-210ENST00000460801 SEC23AQ15436 765 aa16.2■□□□□ 0.18
PTPRN-210ENST00000460801 STK11IPQ8N1F8 1099 aa16.2■□□□□ 0.18
PTPRN-210ENST00000460801 PCDHA7Q9UN72 937 aa16.2■□□□□ 0.18
PTPRN-210ENST00000460801 CLIC4Q9Y696 253 aa16.2■□□□□ 0.18
PTPRN-210ENST00000460801 CCDC88AQ3V6T2 1871 aa16.2■□□□□ 0.18
PTPRN-210ENST00000460801 MAST2Q6P0Q8 1798 aa16.2■□□□□ 0.18
PTPRN-210ENST00000460801 SMIM22K7EJ46 135 aa16.19■□□□□ 0.18
PTPRN-210ENST00000460801 IGSF3O75054 1194 aa16.19■□□□□ 0.18
PTPRN-210ENST00000460801 FMNL1O95466 1100 aaPredicted RBP16.19■□□□□ 0.18
PTPRN-210ENST00000460801 PCP11498 1178 aaKnown RBP16.19■□□□□ 0.18
PTPRN-210ENST00000460801 CHAF1AQ13111 956 aaPredicted RBP16.19■□□□□ 0.18
PTPRN-210ENST00000460801 SNW1Q13573 536 aaKnown RBP16.19■□□□□ 0.18
PTPRN-210ENST00000460801 ADALQ6DHV7 355 aa16.19■□□□□ 0.18
PTPRN-210ENST00000460801 CTR9Q6PD62 1173 aa16.19■□□□□ 0.18
PTPRN-210ENST00000460801 ANKIB1Q9P2G1 1089 aa16.19■□□□□ 0.18
PTPRN-210ENST00000460801 USP25Q9UHP3 1055 aa16.19■□□□□ 0.18
PTPRN-210ENST00000460801 MYH2Q9UKX2 1941 aa16.19■□□□□ 0.18
PTPRN-210ENST00000460801 A0A1W2PQ27 194 aa16.19■□□□□ 0.18
PTPRN-210ENST00000460801 A0A1W2PQ64 194 aa16.19■□□□□ 0.18
PTPRN-210ENST00000460801 A0A1W2PQD8 194 aa16.19■□□□□ 0.18
PTPRN-210ENST00000460801 SSRP1Q08945 709 aaKnown RBP16.19■□□□□ 0.18
PTPRN-210ENST00000460801 CRY2Q49AN0 593 aa16.19■□□□□ 0.18
PTPRN-210ENST00000460801 FAM200AQ8TCP9 573 aa16.19■□□□□ 0.18
PTPRN-210ENST00000460801 KCNG4Q8TDN1 519 aa16.19■□□□□ 0.18
PTPRN-210ENST00000460801 UBAC1Q9BSL1 405 aa16.19■□□□□ 0.18
PTPRN-210ENST00000460801 NOL7Q9UMY1 257 aaKnown RBP16.19■□□□□ 0.18
PTPRN-210ENST00000460801 DUOX1Q9NRD9 1551 aa16.18■□□□□ 0.18
PTPRN-210ENST00000460801 XDHP47989 1333 aa16.18■□□□□ 0.18
PTPRN-210ENST00000460801 FAM160A1Q05DH4 1040 aa16.18■□□□□ 0.18
PTPRN-210ENST00000460801 RTN1Q16799 776 aa16.18■□□□□ 0.18
PTPRN-210ENST00000460801 SPTY2D1Q68D10 685 aaPredicted RBP16.18■□□□□ 0.18
PTPRN-210ENST00000460801 CCDC73Q6ZRK6 1079 aa16.18■□□□□ 0.18
PTPRN-210ENST00000460801 C15orf52Q6ZUT6 534 aaKnown RBP16.18■□□□□ 0.18
PTPRN-210ENST00000460801 CCDC39Q9UFE4 941 aa16.18■□□□□ 0.18
PTPRN-210ENST00000460801 CYP2D7A0A087X1C5 515 aa16.18■□□□□ 0.18
PTPRN-210ENST00000460801 CTAGE5O15320 804 aa16.18■□□□□ 0.18
PTPRN-210ENST00000460801 STK38Q15208 465 aa16.18■□□□□ 0.18
PTPRN-210ENST00000460801 SLC51AQ86UW1 340 aa16.18■□□□□ 0.18
PTPRN-210ENST00000460801 ZNF654Q8IZM8 581 aa16.18■□□□□ 0.18
PTPRN-210ENST00000460801 TDRD7Q8NHU6 1098 aaKnown RBP16.18■□□□□ 0.18
PTPRN-210ENST00000460801 SLC26A6Q9BXS9 759 aa16.18■□□□□ 0.18
PTPRN-210ENST00000460801 CRNKL1Q9BZJ0 848 aaKnown RBP16.18■□□□□ 0.18
PTPRN-210ENST00000460801 AATFQ9NY61 560 aaKnown RBP eCLIP16.18■□□□□ 0.18
PTPRN-210ENST00000460801 KIAA1551Q9HCM1 1747 aa16.18■□□□□ 0.18
PTPRN-210ENST00000460801 BRWD3Q6RI45 1802 aa16.17■□□□□ 0.18
PTPRN-210ENST00000460801 TNKSO95271 1327 aa16.17■□□□□ 0.18
PTPRN-210ENST00000460801 CCDC196A0A1B0GTZ2 297 aa16.17■□□□□ 0.18
PTPRN-210ENST00000460801 USP17L12C9JPN9 530 aa16.17■□□□□ 0.18
PTPRN-210ENST00000460801 USP17L21D6R901 530 aa16.17■□□□□ 0.18
PTPRN-210ENST00000460801 SPTLC2O15270 562 aa16.17■□□□□ 0.18
PTPRN-210ENST00000460801 ADCY5O95622 1261 aa16.17■□□□□ 0.18
PTPRN-210ENST00000460801 SERPINB2P05120 415 aa16.17■□□□□ 0.18
PTPRN-210ENST00000460801 U2AF2P26368 475 aaKnown RBP eCLIP16.17■□□□□ 0.18
PTPRN-210ENST00000460801 ANO1Q5XXA6 986 aa16.17■□□□□ 0.18
PTPRN-210ENST00000460801 KRT27Q7Z3Y8 459 aa16.17■□□□□ 0.18
PTPRN-210ENST00000460801 NBPF11Q86T75 865 aa16.17■□□□□ 0.18
PTPRN-210ENST00000460801 FSIP1Q8NA03 581 aa16.17■□□□□ 0.18
PTPRN-210ENST00000460801 FANCBQ8NB91 859 aa16.17■□□□□ 0.18
PTPRN-210ENST00000460801 WASF1Q92558 559 aa16.17■□□□□ 0.18
PTPRN-210ENST00000460801 DCP1AQ9NPI6 582 aaPredicted RBP16.17■□□□□ 0.18
PTPRN-210ENST00000460801 ATP8A2Q9NTI2 1148 aa16.17■□□□□ 0.18
PTPRN-210ENST00000460801 SASS6Q6UVJ0 657 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms