RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 USP8P40818 1118 aa7.09□□□□□ -1.27
HLA-DQA1-205ENST00000460633 UBE2HP62256 183 aa7.09□□□□□ -1.27
HLA-DQA1-205ENST00000460633 TMCO4Q5TGY1 634 aa7.09□□□□□ -1.27
HLA-DQA1-205ENST00000460633 NLRX1Q86UT6 975 aa7.09□□□□□ -1.27
HLA-DQA1-205ENST00000460633 DDX17Q92841 729 aaKnown RBP7.09□□□□□ -1.27
HLA-DQA1-205ENST00000460633 LDHBP07195 334 aaKnown RBP7.09□□□□□ -1.27
HLA-DQA1-205ENST00000460633 NLRP5P59047 1200 aa7.09□□□□□ -1.27
HLA-DQA1-205ENST00000460633 GNPTABQ3T906 1256 aa7.09□□□□□ -1.27
HLA-DQA1-205ENST00000460633 IQCEQ6IPM2 695 aa7.09□□□□□ -1.27
HLA-DQA1-205ENST00000460633 CCDC91Q7Z6B0 441 aa7.09□□□□□ -1.27
HLA-DQA1-205ENST00000460633 NACA2Q9H009 215 aa7.09□□□□□ -1.27
HLA-DQA1-205ENST00000460633 OGFRQ9NZT2 677 aa7.09□□□□□ -1.27
HLA-DQA1-205ENST00000460633 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.09□□□□□ -1.27
HLA-DQA1-205ENST00000460633 V9GYY5 206 aaPredicted RBP7.09□□□□□ -1.27
HLA-DQA1-205ENST00000460633 COL16A1Q07092 1604 aaPredicted RBP7.09□□□□□ -1.27
HLA-DQA1-205ENST00000460633 SMTNL1A8MU46 457 aa7.09□□□□□ -1.28
HLA-DQA1-205ENST00000460633 XPOTO43592 962 aaKnown RBP7.09□□□□□ -1.28
HLA-DQA1-205ENST00000460633 TBCAO75347 108 aaKnown RBP7.09□□□□□ -1.28
HLA-DQA1-205ENST00000460633 RLBP1P12271 317 aa7.09□□□□□ -1.28
HLA-DQA1-205ENST00000460633 TTC22Q5TAA0 569 aa7.09□□□□□ -1.28
HLA-DQA1-205ENST00000460633 CCDC186Q7Z3E2 898 aa7.09□□□□□ -1.28
HLA-DQA1-205ENST00000460633 CALML4Q96GE6 196 aa7.09□□□□□ -1.28
HLA-DQA1-205ENST00000460633 ALS2CR12Q96Q35 445 aa7.09□□□□□ -1.28
HLA-DQA1-205ENST00000460633 JPH2Q9BR39 696 aaPredicted RBP7.09□□□□□ -1.28
HLA-DQA1-205ENST00000460633 CCDC194A0A1B0GVG4 234 aa7.08□□□□□ -1.28
HLA-DQA1-205ENST00000460633 ATP2B1P20020 1258 aa7.08□□□□□ -1.28
HLA-DQA1-205ENST00000460633 LMAN1P49257 510 aa7.08□□□□□ -1.28
HLA-DQA1-205ENST00000460633 ARHGAP45Q92619 1136 aa7.08□□□□□ -1.28
HLA-DQA1-205ENST00000460633 TRIM6Q9C030 488 aaPredicted RBP7.08□□□□□ -1.28
HLA-DQA1-205ENST00000460633 NEMFO60524 1076 aa7.08□□□□□ -1.28
HLA-DQA1-205ENST00000460633 UFL1O94874 794 aa7.08□□□□□ -1.28
HLA-DQA1-205ENST00000460633 SNW1Q13573 536 aaKnown RBP7.08□□□□□ -1.28
HLA-DQA1-205ENST00000460633 NKX1-1Q15270 411 aaPredicted RBP7.08□□□□□ -1.28
HLA-DQA1-205ENST00000460633 CFAP100Q494V2 611 aa7.08□□□□□ -1.28
HLA-DQA1-205ENST00000460633 GPATCH4Q5T3I0 446 aaKnown RBP7.08□□□□□ -1.28
HLA-DQA1-205ENST00000460633 PRPF40BQ6NWY9 871 aaKnown RBP7.08□□□□□ -1.28
HLA-DQA1-205ENST00000460633 USHBP1Q8N6Y0 703 aa7.08□□□□□ -1.28
HLA-DQA1-205ENST00000460633 KIAA1524Q8TCG1 905 aa7.08□□□□□ -1.28
HLA-DQA1-205ENST00000460633 CENPHQ9H3R5 247 aa7.08□□□□□ -1.28
HLA-DQA1-205ENST00000460633 USP54Q70EL1 1684 aa7.08□□□□□ -1.28
HLA-DQA1-205ENST00000460633 KBTBD13C9JR72 458 aa7.08□□□□□ -1.28
HLA-DQA1-205ENST00000460633 TSPY3P0CV98 308 aa7.08□□□□□ -1.28
HLA-DQA1-205ENST00000460633 TSPY8P0CW00 308 aa7.08□□□□□ -1.28
HLA-DQA1-205ENST00000460633 KCNJ6P48051 423 aa7.08□□□□□ -1.28
HLA-DQA1-205ENST00000460633 MCM10Q7L590 875 aa7.08□□□□□ -1.28
HLA-DQA1-205ENST00000460633 ZNF354CQ86Y25 554 aa7.08□□□□□ -1.28
HLA-DQA1-205ENST00000460633 APOBEC3FQ8IUX4 373 aaKnown RBP7.08□□□□□ -1.28
HLA-DQA1-205ENST00000460633 EDEM3Q9BZQ6 932 aa7.08□□□□□ -1.28
HLA-DQA1-205ENST00000460633 ANO10Q9NW15 660 aa7.08□□□□□ -1.28
HLA-DQA1-205ENST00000460633 NSFL1CQ9UNZ2 370 aaKnown RBP7.08□□□□□ -1.28
HLA-DQA1-205ENST00000460633 LIMCH1Q9UPQ0 1083 aa7.08□□□□□ -1.28
HLA-DQA1-205ENST00000460633 SPDYE3A6NKU9 549 aa7.08□□□□□ -1.28
HLA-DQA1-205ENST00000460633 GNAT1P11488 350 aa7.08□□□□□ -1.28
HLA-DQA1-205ENST00000460633 GJB2P29033 226 aa7.08□□□□□ -1.28
HLA-DQA1-205ENST00000460633 GTF2A1P52655 376 aaPredicted RBP7.08□□□□□ -1.28
HLA-DQA1-205ENST00000460633 TERF1P54274 439 aa7.08□□□□□ -1.28
HLA-DQA1-205ENST00000460633 LDHAL6AQ6ZMR3 332 aa7.08□□□□□ -1.28
HLA-DQA1-205ENST00000460633 NSMCE1Q8WV22 266 aa7.08□□□□□ -1.28
HLA-DQA1-205ENST00000460633 SCAND2PQ9GZW5 306 aaPredicted RBP7.08□□□□□ -1.28
HLA-DQA1-205ENST00000460633 CNNM2Q9H8M5 875 aa7.08□□□□□ -1.28
HLA-DQA1-205ENST00000460633 BMP15O95972 392 aa7.07□□□□□ -1.28
HLA-DQA1-205ENST00000460633 U2AF2P26368 475 aaKnown RBP eCLIP7.07□□□□□ -1.28
HLA-DQA1-205ENST00000460633 MMP14P50281 582 aa7.07□□□□□ -1.28
HLA-DQA1-205ENST00000460633 KCTD2Q14681 263 aa7.07□□□□□ -1.28
HLA-DQA1-205ENST00000460633 MTHFSDQ2M296 383 aaKnown RBP7.07□□□□□ -1.28
HLA-DQA1-205ENST00000460633 FAM47CQ5HY64 1035 aa7.07□□□□□ -1.28
HLA-DQA1-205ENST00000460633 STK11IPQ8N1F8 1099 aa7.07□□□□□ -1.28
HLA-DQA1-205ENST00000460633 CCDC191Q8NCU4 936 aa7.07□□□□□ -1.28
HLA-DQA1-205ENST00000460633 TFIP11Q9UBB9 837 aaKnown RBP7.07□□□□□ -1.28
HLA-DQA1-205ENST00000460633 RAB23Q9ULC3 237 aa7.07□□□□□ -1.28
HLA-DQA1-205ENST00000460633 ATP8B3O60423 1300 aa7.07□□□□□ -1.28
HLA-DQA1-205ENST00000460633 PHRF1Q9P1Y6 1649 aaKnown RBP7.07□□□□□ -1.28
HLA-DQA1-205ENST00000460633 ZSCAN12O43309 604 aa7.07□□□□□ -1.28
HLA-DQA1-205ENST00000460633 ATF7P17544 494 aaPredicted RBP7.07□□□□□ -1.28
HLA-DQA1-205ENST00000460633 DPP9Q86TI2 863 aa7.07□□□□□ -1.28
HLA-DQA1-205ENST00000460633 GIMAP7Q8NHV1 300 aa7.07□□□□□ -1.28
HLA-DQA1-205ENST00000460633 RAET1EQ8TD07 263 aa7.07□□□□□ -1.28
HLA-DQA1-205ENST00000460633 TANGO6Q9C0B7 1094 aa7.07□□□□□ -1.28
HLA-DQA1-205ENST00000460633 CCDC171Q6TFL3 1326 aa7.07□□□□□ -1.28
HLA-DQA1-205ENST00000460633 C17orf53Q8N3J3 647 aaPredicted RBP7.07□□□□□ -1.28
HLA-DQA1-205ENST00000460633 BANK1Q8NDB2 785 aa7.07□□□□□ -1.28
HLA-DQA1-205ENST00000460633 MYRIPQ8NFW9 859 aa7.07□□□□□ -1.28
HLA-DQA1-205ENST00000460633 TAOK3Q9H2K8 898 aa7.07□□□□□ -1.28
HLA-DQA1-205ENST00000460633 ZFYVE28Q9HCC9 887 aa7.07□□□□□ -1.28
HLA-DQA1-205ENST00000460633 SLIT2O94813 1529 aa7.07□□□□□ -1.28
HLA-DQA1-205ENST00000460633 TSPY2A6NKD2 308 aa7.07□□□□□ -1.28
HLA-DQA1-205ENST00000460633 SSR1P43307 286 aaKnown RBP7.07□□□□□ -1.28
HLA-DQA1-205ENST00000460633 ZNF165P49910 485 aa7.07□□□□□ -1.28
HLA-DQA1-205ENST00000460633 GADL1Q6ZQY3 521 aa7.07□□□□□ -1.28
HLA-DQA1-205ENST00000460633 IL6STP40189 918 aaPredicted RBP7.07□□□□□ -1.28
HLA-DQA1-205ENST00000460633 TMC6Q7Z403 805 aa7.07□□□□□ -1.28
HLA-DQA1-205ENST00000460633 TTLL6Q8N841 843 aa7.07□□□□□ -1.28
HLA-DQA1-205ENST00000460633 HINFPQ9BQA5 517 aa7.07□□□□□ -1.28
HLA-DQA1-205ENST00000460633 SRGAP3O43295 1099 aa7.06□□□□□ -1.28
HLA-DQA1-205ENST00000460633 ZSCAN22P10073 491 aaPredicted RBP7.06□□□□□ -1.28
HLA-DQA1-205ENST00000460633 SDSP20132 328 aa7.06□□□□□ -1.28
HLA-DQA1-205ENST00000460633 TSHZ3Q63HK5 1081 aa7.06□□□□□ -1.28
HLA-DQA1-205ENST00000460633 DDX19AQ9NUU7 478 aaKnown RBP7.06□□□□□ -1.28
HLA-DQA1-205ENST00000460633 ERVV-1B6SEH8 477 aa7.06□□□□□ -1.28
HLA-DQA1-205ENST00000460633 PHACTR2O75167 634 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms