RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 GARTP22102 1010 aa7.58□□□□□ -1.2
VBP1-202ENST00000460509 ID3Q02535 119 aa7.58□□□□□ -1.2
VBP1-202ENST00000460509 SOX4Q06945 474 aaPredicted RBP7.58□□□□□ -1.2
VBP1-202ENST00000460509 APOBRQ0VD83 1088 aa7.58□□□□□ -1.2
VBP1-202ENST00000460509 GNL2Q13823 731 aaKnown RBP7.58□□□□□ -1.2
VBP1-202ENST00000460509 INPP5AQ14642 412 aa7.58□□□□□ -1.2
VBP1-202ENST00000460509 MBTPS1Q14703 1052 aa7.58□□□□□ -1.2
VBP1-202ENST00000460509 KIF4BQ2VIQ3 1234 aa7.58□□□□□ -1.2
VBP1-202ENST00000460509 WIPI1Q5MNZ9 446 aaPredicted RBP7.58□□□□□ -1.2
VBP1-202ENST00000460509 FAM196AQ6ZSG2 479 aa7.58□□□□□ -1.2
VBP1-202ENST00000460509 C12orf40Q86WS4 652 aa7.58□□□□□ -1.2
VBP1-202ENST00000460509 PLPPR2Q96GM1 343 aa7.58□□□□□ -1.2
VBP1-202ENST00000460509 EAF1Q96JC9 268 aaPredicted RBP7.58□□□□□ -1.2
VBP1-202ENST00000460509 CEP41Q9BYV8 373 aa7.58□□□□□ -1.2
VBP1-202ENST00000460509 PPP1R9AQ9ULJ8 1098 aa7.58□□□□□ -1.2
VBP1-202ENST00000460509 PRAMEF27A3QJZ7 478 aa7.57□□□□□ -1.2
VBP1-202ENST00000460509 C1QTNF9BB2RNN3 333 aa7.57□□□□□ -1.2
VBP1-202ENST00000460509 GAS2O43903 313 aaKnown RBP7.57□□□□□ -1.2
VBP1-202ENST00000460509 ADH5P11766 374 aa7.57□□□□□ -1.2
VBP1-202ENST00000460509 MCM4P33991 863 aa7.57□□□□□ -1.2
VBP1-202ENST00000460509 CHRNA4P43681 627 aa7.57□□□□□ -1.2
VBP1-202ENST00000460509 ZC3H6P61129 1189 aaKnown RBP7.57□□□□□ -1.2
VBP1-202ENST00000460509 SEZ6Q53EL9 994 aa7.57□□□□□ -1.2
VBP1-202ENST00000460509 NAALADL2Q58DX5 795 aa7.57□□□□□ -1.2
VBP1-202ENST00000460509 ANKRD34AQ69YU3 496 aa7.57□□□□□ -1.2
VBP1-202ENST00000460509 SCARA3Q6AZY7 606 aa7.57□□□□□ -1.2
VBP1-202ENST00000460509 LRFN4Q6PJG9 635 aa7.57□□□□□ -1.2
VBP1-202ENST00000460509 HDXQ7Z353 690 aa7.57□□□□□ -1.2
VBP1-202ENST00000460509 CCDC84Q86UT8 332 aaPredicted RBP7.57□□□□□ -1.2
VBP1-202ENST00000460509 SMG8Q8ND04 991 aaKnown RBP7.57□□□□□ -1.2
VBP1-202ENST00000460509 NKD1Q969G9 470 aa7.57□□□□□ -1.2
VBP1-202ENST00000460509 GREM1O60565 184 aa7.56□□□□□ -1.2
VBP1-202ENST00000460509 USP11P51784 963 aa7.56□□□□□ -1.2
VBP1-202ENST00000460509 RPL6Q02878 288 aaKnown RBP7.56□□□□□ -1.2
VBP1-202ENST00000460509 ADGRE1Q14246 886 aa7.56□□□□□ -1.2
VBP1-202ENST00000460509 CD163Q86VB7 1156 aa7.56□□□□□ -1.2
VBP1-202ENST00000460509 GPRASP2Q96D09 838 aa7.56□□□□□ -1.2
VBP1-202ENST00000460509 NT5C1AQ9BXI3 368 aa7.56□□□□□ -1.2
VBP1-202ENST00000460509 SUGCTQ9HAC7 445 aa7.56□□□□□ -1.2
VBP1-202ENST00000460509 CACNA2D2Q9NY47 1150 aa7.56□□□□□ -1.2
VBP1-202ENST00000460509 FAM221AA4D161 298 aa7.55□□□□□ -1.2
VBP1-202ENST00000460509 TMPRSS2O15393 492 aa7.55□□□□□ -1.2
VBP1-202ENST00000460509 GRIN3BO60391 1043 aa7.55□□□□□ -1.2
VBP1-202ENST00000460509 RNGTTO60942 597 aaKnown RBP7.55□□□□□ -1.2
VBP1-202ENST00000460509 CILPO75339 1184 aa7.55□□□□□ -1.2
VBP1-202ENST00000460509 ASPAP45381 313 aa7.55□□□□□ -1.2
VBP1-202ENST00000460509 CRKP46108 304 aa7.55□□□□□ -1.2
VBP1-202ENST00000460509 PREPP48147 710 aa7.55□□□□□ -1.2
VBP1-202ENST00000460509 MPP2Q14168 576 aa7.55□□□□□ -1.2
VBP1-202ENST00000460509 CWF19L2Q2TBE0 894 aaKnown RBP7.55□□□□□ -1.2
VBP1-202ENST00000460509 ZC3H12AQ5D1E8 599 aaKnown RBP7.55□□□□□ -1.2
VBP1-202ENST00000460509 PPM1JQ5JR12 505 aa7.55□□□□□ -1.2
VBP1-202ENST00000460509 TXNRD3Q86VQ6 643 aa7.55□□□□□ -1.2
VBP1-202ENST00000460509 VPS37DQ86XT2 251 aa7.55□□□□□ -1.2
VBP1-202ENST00000460509 PIDD1Q9HB75 910 aa7.55□□□□□ -1.2
VBP1-202ENST00000460509 ADAM23O75077 832 aa7.54□□□□□ -1.2
VBP1-202ENST00000460509 HCLS1P14317 486 aaPredicted RBP7.54□□□□□ -1.2
VBP1-202ENST00000460509 RXRBP28702 533 aa7.54□□□□□ -1.2
VBP1-202ENST00000460509 FANCD2OSQ96PS1 177 aa7.54□□□□□ -1.2
VBP1-202ENST00000460509 UBL7Q96S82 380 aaPredicted RBP7.54□□□□□ -1.2
VBP1-202ENST00000460509 ATXN3LQ9H3M9 355 aa7.54□□□□□ -1.2
VBP1-202ENST00000460509 SSU72Q9NP77 194 aaKnown RBP7.54□□□□□ -1.2
VBP1-202ENST00000460509 KCNQ5Q9NR82 932 aa7.54□□□□□ -1.2
VBP1-202ENST00000460509 CRIM1Q9NZV1 1036 aa7.54□□□□□ -1.2
VBP1-202ENST00000460509 HIF3AQ9Y2N7 669 aa7.54□□□□□ -1.2
VBP1-202ENST00000460509 SNCAIPQ9Y6H5 919 aa7.54□□□□□ -1.2
VBP1-202ENST00000460509 ROBO2Q9HCK4 1378 aa7.54□□□□□ -1.2
VBP1-202ENST00000460509 TIAF1O95411 115 aa7.53□□□□□ -1.2
VBP1-202ENST00000460509 RAB6AP20340 208 aa7.53□□□□□ -1.2
VBP1-202ENST00000460509 DNAJA1P31689 397 aaKnown RBP7.53□□□□□ -1.2
VBP1-202ENST00000460509 GATA4P43694 442 aa7.53□□□□□ -1.2
VBP1-202ENST00000460509 ETF1P62495 437 aaKnown RBP7.53□□□□□ -1.2
VBP1-202ENST00000460509 TTLL4Q14679 1199 aa7.53□□□□□ -1.2
VBP1-202ENST00000460509 GK5Q6ZS86 529 aa7.53□□□□□ -1.2
VBP1-202ENST00000460509 REC114Q7Z4M0 266 aa7.53□□□□□ -1.2
VBP1-202ENST00000460509 UTP4Q969X6 686 aaKnown RBP7.53□□□□□ -1.2
VBP1-202ENST00000460509 MEGF10Q96KG7 1140 aa7.53□□□□□ -1.2
VBP1-202ENST00000460509 BRMS1Q9HCU9 246 aa7.53□□□□□ -1.2
VBP1-202ENST00000460509 DISC1Q9NRI5 854 aa7.53□□□□□ -1.2
VBP1-202ENST00000460509 EFR3BQ9Y2G0 817 aa7.53□□□□□ -1.2
VBP1-202ENST00000460509 PCDHGC5Q9Y5F6 944 aa7.53□□□□□ -1.2
VBP1-202ENST00000460509 ACTL7BQ9Y614 415 aa7.53□□□□□ -1.2
VBP1-202ENST00000460509 ERVK-24P63145 666 aa7.52□□□□□ -1.21
VBP1-202ENST00000460509 FBXW10Q5XX13 1052 aa7.52□□□□□ -1.21
VBP1-202ENST00000460509 C2CD4AQ8NCU7 369 aaPredicted RBP7.52□□□□□ -1.21
VBP1-202ENST00000460509 TINF2Q9BSI4 451 aa7.52□□□□□ -1.21
VBP1-202ENST00000460509 KCNF1Q9H3M0 494 aa7.52□□□□□ -1.21
VBP1-202ENST00000460509 LGR6Q9HBX8 967 aa7.52□□□□□ -1.21
VBP1-202ENST00000460509 GINM1Q9NU53 330 aa7.52□□□□□ -1.21
VBP1-202ENST00000460509 FAM105AQ9NUU6 356 aa7.52□□□□□ -1.21
VBP1-202ENST00000460509 SYNGAP1Q96PV0 1343 aa7.52□□□□□ -1.21
VBP1-202ENST00000460509 GFRA2O00451 464 aa7.51□□□□□ -1.21
VBP1-202ENST00000460509 BMP3P12645 472 aa7.51□□□□□ -1.21
VBP1-202ENST00000460509 GRK4P32298 578 aa7.51□□□□□ -1.21
VBP1-202ENST00000460509 SGO2Q562F6 1265 aa7.51□□□□□ -1.21
VBP1-202ENST00000460509 CDC37L1Q7L3B6 337 aa7.51□□□□□ -1.21
VBP1-202ENST00000460509 FBLIM1Q8WUP2 373 aa7.51□□□□□ -1.21
VBP1-202ENST00000460509 CORINQ9Y5Q5 1042 aa7.51□□□□□ -1.21
VBP1-202ENST00000460509 PGRP06401 933 aa7.5□□□□□ -1.21
VBP1-202ENST00000460509 PLCG1P19174 1290 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms